RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 WDTC1Q8N5D0 677 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 EIF1ADQ8N9N8 165 aaKnown RBP8.58□□□□□ -1.04
SFPQ-202ENST00000460428 TMEM35BQ8NCS4 154 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 ZNF564Q8TBZ8 553 aaPredicted RBP8.58□□□□□ -1.04
SFPQ-202ENST00000460428 CAGE1Q8TC20 777 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 ZNF653Q96CK0 615 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 HPDLQ96IR7 371 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 CAPZA3Q96KX2 299 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 ZMAT2Q96NC0 199 aaKnown RBP8.58□□□□□ -1.04
SFPQ-202ENST00000460428 PPP1R16BQ96T49 567 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 PNKPQ96T60 521 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 ZSWIM1Q9BR11 485 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 TSEN34Q9BSV6 310 aaKnown RBP8.58□□□□□ -1.04
SFPQ-202ENST00000460428 NUP85Q9BW27 656 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 EIF2AQ9BY44 585 aaKnown RBP8.58□□□□□ -1.04
SFPQ-202ENST00000460428 SENP6Q9GZR1 1112 aaPredicted RBP8.58□□□□□ -1.04
SFPQ-202ENST00000460428 SDCBP2Q9H190 292 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 EPC1Q9H2F5 836 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 PDCL3Q9H2J4 239 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 XPNPEP3Q9NQH7 507 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 SNTG2Q9NY99 539 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 BARX2Q9UMQ3 279 aaPredicted RBP8.58□□□□□ -1.04
SFPQ-202ENST00000460428 TRPV2Q9Y5S1 764 aa8.58□□□□□ -1.04
SFPQ-202ENST00000460428 TRIP12Q14669 1992 aaPredicted RBP8.57□□□□□ -1.04
SFPQ-202ENST00000460428 CCDC66A2RUB6 948 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 PGRMC1O00264 195 aaKnown RBP8.57□□□□□ -1.04
SFPQ-202ENST00000460428 THAP12O43422 761 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 MED7O43513 233 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 XPOTO43592 962 aaKnown RBP8.57□□□□□ -1.04
SFPQ-202ENST00000460428 ZNF623O75123 536 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 RECQL4O94761 1208 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 CLSTN1O94985 981 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 PGK1P00558 417 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 CALB1P05937 261 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 ASGR1P07306 291 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 CFHP08603 1231 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 WEE2P0C1S8 567 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 VDRP11473 427 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 PRKAR2AP13861 404 aaKnown RBP8.57□□□□□ -1.04
SFPQ-202ENST00000460428 HSPA6P17066 643 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 FGFR4P22455 802 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 RRM1P23921 792 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 CCND3P30281 292 aaPredicted RBP8.57□□□□□ -1.04
SFPQ-202ENST00000460428 POLR2BP30876 1174 aaKnown RBP8.57□□□□□ -1.04
SFPQ-202ENST00000460428 CXCR5P32302 372 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 GABRB2P47870 512 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 RBM10P98175 930 aaKnown RBP8.57□□□□□ -1.04
SFPQ-202ENST00000460428 TAP1Q03518 808 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 TMEM62Q0P6H9 643 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 MYO1EQ12965 1108 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 MAMLD1Q13495 774 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 STILQ15468 1287 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 KCNA10Q16322 511 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 PPP1R15BQ5SWA1 713 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 BEND6Q5SZJ8 279 aaPredicted RBP8.57□□□□□ -1.04
SFPQ-202ENST00000460428 GDF6Q6KF10 455 aaPredicted RBP8.57□□□□□ -1.04
SFPQ-202ENST00000460428 CCDC70Q6NSX1 233 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 CC2D1AQ6P1N0 951 aaPredicted RBP8.57□□□□□ -1.04
SFPQ-202ENST00000460428 DPH6Q7L8W6 267 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 MRPL10Q7Z7H8 261 aaKnown RBP8.57□□□□□ -1.04
SFPQ-202ENST00000460428 UNC93AQ86WB7 457 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 UBL4BQ8N7F7 174 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 SLC43A3Q8NBI5 491 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 SLC4A11Q8NBS3 891 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 SMG8Q8ND04 991 aaKnown RBP8.57□□□□□ -1.04
SFPQ-202ENST00000460428 BEST2Q8NFU1 509 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 CPA5Q8WXQ8 436 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 TFAP2BQ92481 460 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 TMEM176AQ96HP8 235 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 MS4A14Q96JA4 679 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 NAP1L3Q99457 506 aaPredicted RBP8.57□□□□□ -1.04
SFPQ-202ENST00000460428 SEZ6LQ9BYH1 1024 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 GOLPH3Q9H4A6 298 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 ARFGAP3Q9NP61 516 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 PARVAQ9NVD7 372 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 ZNF446Q9NWS9 450 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 GDAP2Q9NXN4 497 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 ADAM22Q9P0K1 906 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 DDX20Q9UHI6 824 aaKnown RBP8.57□□□□□ -1.04
SFPQ-202ENST00000460428 POLIQ9UNA4 740 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 PACSIN2Q9UNF0 486 aaPredicted RBP8.57□□□□□ -1.04
SFPQ-202ENST00000460428 AGAP1Q9UPQ3 857 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 NOC2LQ9Y3T9 749 aaKnown RBP8.57□□□□□ -1.04
SFPQ-202ENST00000460428 SCINQ9Y6U3 715 aa8.57□□□□□ -1.04
SFPQ-202ENST00000460428 SMIM28A0A1B0GU29 152 aa8.56□□□□□ -1.04
SFPQ-202ENST00000460428 TMEM191CA6NGB0 347 aa8.56□□□□□ -1.04
SFPQ-202ENST00000460428 MOXD2PA6NHM9 499 aa8.56□□□□□ -1.04
SFPQ-202ENST00000460428 TULP1O00294 542 aaPredicted RBP8.56□□□□□ -1.04
SFPQ-202ENST00000460428 MAP2K7O14733 419 aa8.56□□□□□ -1.04
SFPQ-202ENST00000460428 RRP9O43818 475 aaKnown RBP8.56□□□□□ -1.04
SFPQ-202ENST00000460428 ERLIN1O75477 346 aa8.56□□□□□ -1.04
SFPQ-202ENST00000460428 RPS6KA5O75582 802 aa8.56□□□□□ -1.04
SFPQ-202ENST00000460428 ECM2O94769 699 aaPredicted RBP8.56□□□□□ -1.04
SFPQ-202ENST00000460428 PROSCO94903 275 aa8.56□□□□□ -1.04
SFPQ-202ENST00000460428 CHRNA1P02708 482 aa8.56□□□□□ -1.04
SFPQ-202ENST00000460428 KRT19P08727 400 aa8.56□□□□□ -1.04
SFPQ-202ENST00000460428 ATF7P17544 494 aaPredicted RBP8.56□□□□□ -1.04
SFPQ-202ENST00000460428 COMTP21964 271 aa8.56□□□□□ -1.04
SFPQ-202ENST00000460428 LRPAP1P30533 357 aa8.56□□□□□ -1.04
SFPQ-202ENST00000460428 PNPLA4P41247 253 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms