RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 TRIM43Q96BQ3 446 aaPredicted RBP6.65□□□□□ -1.34
CCDC50-203ENST00000460064 KLHL32Q96NJ5 620 aa6.65□□□□□ -1.34
CCDC50-203ENST00000460064 KCNC2Q96PR1 638 aa6.65□□□□□ -1.34
CCDC50-203ENST00000460064 SIK2Q9H0K1 926 aa6.65□□□□□ -1.34
CCDC50-203ENST00000460064 TMX2Q9Y320 296 aa6.65□□□□□ -1.34
CCDC50-203ENST00000460064 SLC30A1Q9Y6M5 507 aa6.65□□□□□ -1.34
CCDC50-203ENST00000460064 M0QYG6 137 aa6.64□□□□□ -1.35
CCDC50-203ENST00000460064 GPR42O15529 346 aa6.64□□□□□ -1.35
CCDC50-203ENST00000460064 KIF20AO95235 890 aa6.64□□□□□ -1.35
CCDC50-203ENST00000460064 TRAPPC10P48553 1259 aa6.64□□□□□ -1.35
CCDC50-203ENST00000460064 SLC11A2P49281 568 aa6.64□□□□□ -1.35
CCDC50-203ENST00000460064 MAPK10P53779 464 aa6.64□□□□□ -1.35
CCDC50-203ENST00000460064 UCP3P55916 312 aa6.64□□□□□ -1.35
CCDC50-203ENST00000460064 NOMO2Q5JPE7 1267 aa6.64□□□□□ -1.35
CCDC50-203ENST00000460064 DGKKQ5KSL6 1271 aa6.64□□□□□ -1.35
CCDC50-203ENST00000460064 MICU3Q86XE3 530 aa6.64□□□□□ -1.35
CCDC50-203ENST00000460064 FAM46DQ8NEK8 389 aa6.64□□□□□ -1.35
CCDC50-203ENST00000460064 SNX22Q96L94 193 aa6.64□□□□□ -1.35
CCDC50-203ENST00000460064 STK31Q9BXU1 1019 aa6.64□□□□□ -1.35
CCDC50-203ENST00000460064 TINAGL1Q9GZM7 467 aaPredicted RBP6.64□□□□□ -1.35
CCDC50-203ENST00000460064 REXO4Q9GZR2 422 aaKnown RBP6.64□□□□□ -1.35
CCDC50-203ENST00000460064 XYLT2Q9H1B5 865 aa6.64□□□□□ -1.35
CCDC50-203ENST00000460064 A1CFQ9NQ94 594 aaKnown RBP6.64□□□□□ -1.35
CCDC50-203ENST00000460064 SERHLQ9NQF3 203 aa6.64□□□□□ -1.35
CCDC50-203ENST00000460064 CDC23Q9UJX2 597 aa6.64□□□□□ -1.35
CCDC50-203ENST00000460064 ITGB1BP2Q9UKP3 347 aa6.64□□□□□ -1.35
CCDC50-203ENST00000460064 CEP83Q9Y592 693 aa6.64□□□□□ -1.35
CCDC50-203ENST00000460064 CAPN14A8MX76 684 aa6.63□□□□□ -1.35
CCDC50-203ENST00000460064 PYCARD-AS1I3L0S3 204 aa6.63□□□□□ -1.35
CCDC50-203ENST00000460064 TCEA3O75764 348 aa6.63□□□□□ -1.35
CCDC50-203ENST00000460064 CHEK2O96017 543 aa6.63□□□□□ -1.35
CCDC50-203ENST00000460064 FOSP01100 380 aaPredicted RBP6.63□□□□□ -1.35
CCDC50-203ENST00000460064 PPM1AP35813 382 aa6.63□□□□□ -1.35
CCDC50-203ENST00000460064 PTTG1IPP53801 180 aa6.63□□□□□ -1.35
CCDC50-203ENST00000460064 ZFYVE27Q5T4F4 411 aa6.63□□□□□ -1.35
CCDC50-203ENST00000460064 TSHZ3Q63HK5 1081 aa6.63□□□□□ -1.35
CCDC50-203ENST00000460064 SPTY2D1Q68D10 685 aaPredicted RBP6.63□□□□□ -1.35
CCDC50-203ENST00000460064 SIAH1Q8IUQ4 282 aa6.63□□□□□ -1.35
CCDC50-203ENST00000460064 ZFPM1Q8IX07 1006 aa6.63□□□□□ -1.35
CCDC50-203ENST00000460064 TXLNBQ8N3L3 684 aa6.63□□□□□ -1.35
CCDC50-203ENST00000460064 PDPRQ8NCN5 879 aa6.63□□□□□ -1.35
CCDC50-203ENST00000460064 NUP133Q8WUM0 1156 aa6.63□□□□□ -1.35
CCDC50-203ENST00000460064 MARS2Q96GW9 593 aaKnown RBP6.63□□□□□ -1.35
CCDC50-203ENST00000460064 ZC3H10Q96K80 434 aaKnown RBP6.63□□□□□ -1.35
CCDC50-203ENST00000460064 CRB3Q9BUF7 120 aa6.63□□□□□ -1.35
CCDC50-203ENST00000460064 COLEC11Q9BWP8 271 aa6.63□□□□□ -1.35
CCDC50-203ENST00000460064 WDR12Q9GZL7 423 aaKnown RBP6.63□□□□□ -1.35
CCDC50-203ENST00000460064 XPR1Q9UBH6 696 aa6.63□□□□□ -1.35
CCDC50-203ENST00000460064 PAXBP1Q9Y5B6 917 aa6.63□□□□□ -1.35
CCDC50-203ENST00000460064 PCDHGB2Q9Y5G2 931 aa6.63□□□□□ -1.35
CCDC50-203ENST00000460064 TMEM233B4DJY2 109 aa6.62□□□□□ -1.35
CCDC50-203ENST00000460064 E9PLN8 166 aa6.62□□□□□ -1.35
CCDC50-203ENST00000460064 PRICKLE3O43900 615 aaPredicted RBP6.62□□□□□ -1.35
CCDC50-203ENST00000460064 VPS4BO75351 444 aa6.62□□□□□ -1.35
CCDC50-203ENST00000460064 MT-ND5P03915 603 aa6.62□□□□□ -1.35
CCDC50-203ENST00000460064 PIM1P11309 404 aaPredicted RBP6.62□□□□□ -1.35
CCDC50-203ENST00000460064 HARSP12081 509 aaKnown RBP6.62□□□□□ -1.35
CCDC50-203ENST00000460064 HTRA4P83105 476 aaPredicted RBP6.62□□□□□ -1.35
CCDC50-203ENST00000460064 NHLH2Q02577 135 aa6.62□□□□□ -1.35
CCDC50-203ENST00000460064 PMS2P11Q13670 270 aa6.62□□□□□ -1.35
CCDC50-203ENST00000460064 TRIM14Q14142 442 aa6.62□□□□□ -1.35
CCDC50-203ENST00000460064 DCAF17Q5H9S7 520 aaPredicted RBP6.62□□□□□ -1.35
CCDC50-203ENST00000460064 FAM160B1Q5W0V3 765 aa6.62□□□□□ -1.35
CCDC50-203ENST00000460064 UNC13DQ70J99 1090 aa6.62□□□□□ -1.35
CCDC50-203ENST00000460064 RNF44Q7L0R7 432 aa6.62□□□□□ -1.35
CCDC50-203ENST00000460064 SYT12Q8IV01 421 aa6.62□□□□□ -1.35
CCDC50-203ENST00000460064 IQCDQ96DY2 449 aa6.62□□□□□ -1.35
CCDC50-203ENST00000460064 MNTQ99583 582 aa6.62□□□□□ -1.35
CCDC50-203ENST00000460064 VKORC1Q9BQB6 163 aa6.62□□□□□ -1.35
CCDC50-203ENST00000460064 CNPPD1Q9BV87 410 aa6.62□□□□□ -1.35
CCDC50-203ENST00000460064 TLR10Q9BXR5 811 aa6.62□□□□□ -1.35
CCDC50-203ENST00000460064 GJB4Q9NTQ9 266 aa6.62□□□□□ -1.35
CCDC50-203ENST00000460064 A0A087WWL8 130 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 GOLGA6L6A8MZA4 724 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 LEFTY2O00292 366 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 POLRMTO00411 1230 aaKnown RBP6.61□□□□□ -1.35
CCDC50-203ENST00000460064 THAP12O43422 761 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 RASSF9O75901 435 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 ANXA2P07355 339 aaKnown RBP6.61□□□□□ -1.35
CCDC50-203ENST00000460064 FGFR2P21802 821 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 COMTP21964 271 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 GCSHP23434 173 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 TECP42680 631 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 KRT72Q14CN4 511 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 ANO1Q5XXA6 986 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 ERAP2Q6P179 960 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 SLC30A10Q6XR72 485 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 SPOCD1Q6ZMY3 1216 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 LCNL1Q6ZST4 164 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 SYTL1Q8IYJ3 562 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 CFAP52Q8N1V2 620 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 SDR16C5Q8N3Y7 309 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 NSUN7Q8NE18 718 aaKnown RBP6.61□□□□□ -1.35
CCDC50-203ENST00000460064 ZNF566Q969W8 418 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 SMOQ99835 787 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 GPR87Q9BY21 358 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 MS4A7Q9GZW8 240 aaPredicted RBP6.61□□□□□ -1.35
CCDC50-203ENST00000460064 CHST8Q9H2A9 424 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 PARD6AQ9NPB6 346 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 TBC1D23Q9NUY8 699 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms