RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 SOBPA7XYQ1 873 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 EXTL3O43909 919 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 SEC24AO95486 1093 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 NFICP08651 508 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 MYBP10242 640 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 IDEP14735 1019 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 WEE1P30291 646 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 TUFMP49411 452 aaKnown RBP10.82□□□□□ -0.68
HDLBP-228ENST00000459788 EPHB3P54753 998 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 MLLT6P55198 1093 aaPredicted RBP10.82□□□□□ -0.68
HDLBP-228ENST00000459788 CENPPQ6IPU0 288 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 PDZD4Q76G19 769 aaPredicted RBP10.82□□□□□ -0.68
HDLBP-228ENST00000459788 CCDC105Q8IYK2 499 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 SYCP3Q8IZU3 236 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 THEM5Q8N1Q8 247 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 TMEM86AQ8N2M4 240 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 LRRC52Q8N7C0 313 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 ITFG1Q8TB96 612 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 RSAD2Q8WXG1 361 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 DNASE1L2Q92874 299 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 FGF14Q92915 247 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 NELL2Q99435 816 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 C7orf25Q9BPX7 421 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 TRIM9Q9C026 710 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 SMOC2Q9H3U7 446 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 TRPV5Q9NQA5 729 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 ASAH2Q9NR71 780 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 ARHGEF3Q9NR81 526 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 FAM13BQ9NYF5 915 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 ITGA11Q9UKX5 1188 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 PTPRZ1P23471 2315 aaPredicted RBP10.82□□□□□ -0.68
HDLBP-228ENST00000459788 PTPRDP23468 1912 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 GREB1Q4ZG55 1949 aa10.82□□□□□ -0.68
HDLBP-228ENST00000459788 PVALEFA0A1B0GWK0 134 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 NARSO43776 548 aaKnown RBP10.81□□□□□ -0.68
HDLBP-228ENST00000459788 MYL1P05976 194 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 ALDH1A3P47895 512 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 MRE11P49959 708 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 NTHL1P78549 312 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 SPAG1Q07617 926 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 C1orf228Q6PIY5 440 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 PARM1Q6UWI2 310 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 RNF19BQ6ZMZ0 732 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 DPH6Q7L8W6 267 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 ITIH5Q86UX2 942 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 GPD1LQ8N335 351 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 ZNF507Q8TCN5 953 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 SPPL2BQ8TCT7 592 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 GPR152Q8TDT2 470 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 TMEM174Q8WUU8 243 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 DEPDC1BQ8WUY9 529 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 FAM212AQ96EL1 285 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 DDX23Q9BUQ8 820 aaKnown RBP10.81□□□□□ -0.68
HDLBP-228ENST00000459788 SEMA4AQ9H3S1 761 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 HCFC1R1Q9NWW0 138 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 USP25Q9UHP3 1055 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 RCOR1Q9UKL0 485 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 COL4A2P08572 1712 aa10.81□□□□□ -0.68
HDLBP-228ENST00000459788 KIF26AQ9ULI4 1882 aaPredicted RBP10.81□□□□□ -0.68
HDLBP-228ENST00000459788 TICRRQ7Z2Z1 1910 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 MTMR11A4FU01 709 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 KRBA1A5PL33 1030 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 KPNA7A9QM74 516 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 CYB561D2O14569 222 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 PRPF40AO75400 957 aaKnown RBP10.8□□□□□ -0.68
HDLBP-228ENST00000459788 CFHP08603 1231 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 FAM163BP0C2L3 166 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 GLULP15104 373 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 NBL1P41271 181 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 ARPP19P56211 112 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 EHHADHQ08426 723 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 KCNA1Q09470 495 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 TWF1Q12792 350 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 NFE2Q16621 373 aaPredicted RBP10.8□□□□□ -0.68
HDLBP-228ENST00000459788 SLC5A9Q2M3M2 681 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 RESP18Q5W5W9 173 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 SHC4Q6S5L8 630 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 UNC13DQ70J99 1090 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 EPM2AIP1Q7L775 607 aaPredicted RBP10.8□□□□□ -0.68
HDLBP-228ENST00000459788 EFCAB13Q8IY85 973 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 DCP1BQ8IZD4 617 aaKnown RBP10.8□□□□□ -0.68
HDLBP-228ENST00000459788 PDILTQ8N807 584 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 DTWD2Q8NBA8 298 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 FLCNQ8NFG4 579 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 LEO1Q8WVC0 666 aaPredicted RBP10.8□□□□□ -0.68
HDLBP-228ENST00000459788 SMARCD2Q92925 531 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 PSMG2Q969U7 264 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 MSANTD3Q96H12 275 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 CORO1BQ9BR76 489 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 FAM213AQ9BRX8 229 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 ZCWPW1Q9H0M4 648 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 TBC1D17Q9HA65 648 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 ZFP14Q9HCL3 533 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 FOXD4L1Q9NU39 408 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 GDAP2Q9NXN4 497 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 RBAKQ9NYW8 714 aaPredicted RBP10.8□□□□□ -0.68
HDLBP-228ENST00000459788 CEP72Q9P209 647 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 TFIP11Q9UBB9 837 aaKnown RBP10.8□□□□□ -0.68
HDLBP-228ENST00000459788 YIPF1Q9Y548 306 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 USP34Q70CQ2 3546 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms