RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 NPTXRO95502 500 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 FGBP02675 491 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 IQCF3P0C7M6 154 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 CXCL8P10145 99 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 CASQ1P31415 396 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 ATICP31939 592 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 CYP2C18P33260 490 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 TNFSF9P41273 254 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 MAGEA1P43355 309 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 GNG11P61952 73 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 NOP14P78316 857 aaKnown RBP9.59□□□□□ -0.87
VPS50-207ENST00000458530 TFAMQ00059 246 aaKnown RBP9.59□□□□□ -0.87
VPS50-207ENST00000458530 APBA1Q02410 837 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 TMEM62Q0P6H9 643 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 PTK7Q13308 1070 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 ITGA7Q13683 1181 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 TUBB2AQ13885 445 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 TMEM132DQ14C87 1099 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 PTGISQ16647 500 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 SGSM1Q2NKQ1 1148 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 ZBTB41Q5SVQ8 909 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 GJB7Q6PEY0 223 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 FAM43BQ6ZT52 329 aaPredicted RBP9.59□□□□□ -0.87
VPS50-207ENST00000458530 IRF2BP2Q7Z5L9 587 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 ARHGEF19Q8IW93 802 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 TTC39CQ8N584 583 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 ZNF592Q92610 1267 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 ZFRQ96KR1 1074 aaKnown RBP9.59□□□□□ -0.87
VPS50-207ENST00000458530 CALR3Q96L12 384 aaKnown RBP9.59□□□□□ -0.87
VPS50-207ENST00000458530 TUBB2BQ9BVA1 445 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 MTMR12Q9C0I1 747 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 DNAI2Q9GZS0 605 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 WNT8AQ9H1J5 351 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 ITGA11Q9UKX5 1188 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 COG5Q9UP83 839 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 PIN4Q9Y237 131 aaKnown RBP9.59□□□□□ -0.87
VPS50-207ENST00000458530 PCDHA13Q9Y5I0 950 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 GRIN2DO15399 1336 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 UMODL1Q5DID0 1318 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 TDRD15B5MCY1 1934 aaKnown RBP9.58□□□□□ -0.88
VPS50-207ENST00000458530 EPOPA6NHQ4 379 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 GPR182O15218 404 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 LRRN2O75325 713 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 TACC1O75410 805 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 PLEKP08567 350 aaPredicted RBP9.58□□□□□ -0.88
VPS50-207ENST00000458530 MYOGP15173 224 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 TNFAIP3P21580 790 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 USP8P40818 1118 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 OSTNP61366 133 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 PTK2Q05397 1052 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 CUL2Q13617 745 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 NAB2Q15742 525 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 ASTE1Q2TB18 679 aaPredicted RBP9.58□□□□□ -0.88
VPS50-207ENST00000458530 ZNF699Q32M78 642 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 LMBRD2Q68DH5 695 aaPredicted RBP9.58□□□□□ -0.88
VPS50-207ENST00000458530 GDF6Q6KF10 455 aaPredicted RBP9.58□□□□□ -0.88
VPS50-207ENST00000458530 SYT10Q6XYQ8 523 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 TRAPPC11Q7Z392 1133 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 ZNF677Q86XU0 584 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 FAM71AQ8IYT1 594 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 ANKK1Q8NFD2 765 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 HELQQ8TDG4 1101 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 ZNF516Q92618 1163 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 SEMA4DQ92854 862 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 SECISBP2LQ93073 1101 aaKnown RBP9.58□□□□□ -0.88
VPS50-207ENST00000458530 PPP1R12CQ9BZL4 782 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 NIF3L1Q9GZT8 377 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 MTIF3Q9H2K0 278 aaKnown RBP9.58□□□□□ -0.88
VPS50-207ENST00000458530 CHST12Q9NRB3 414 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 DNAI1Q9UI46 699 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 CDY2AQ9Y6F7 541 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 SQORQ9Y6N5 450 aa9.58□□□□□ -0.88
VPS50-207ENST00000458530 CTAGE9A4FU28 777 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 BTNL10A8MVZ5 291 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 LACTBL1A8MY62 500 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 FOXN3O00409 490 aaPredicted RBP9.57□□□□□ -0.88
VPS50-207ENST00000458530 TLR3O15455 904 aaKnown RBP9.57□□□□□ -0.88
VPS50-207ENST00000458530 PJA2O43164 708 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 CSDE1O75534 798 aaKnown RBP9.57□□□□□ -0.88
VPS50-207ENST00000458530 RPS6KA5O75582 802 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 VNN1O95497 513 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 ASS1P00966 412 aaKnown RBP9.57□□□□□ -0.88
VPS50-207ENST00000458530 H2AFZP0C0S5 128 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 SKIP12755 728 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 KRT5P13647 590 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 ATF7P17544 494 aaPredicted RBP9.57□□□□□ -0.88
VPS50-207ENST00000458530 RAB27AP51159 221 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 RABGGTBP53611 331 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 TERF1P54274 439 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 ZNF200P98182 395 aaPredicted RBP9.57□□□□□ -0.88
VPS50-207ENST00000458530 CYP27A1Q02318 531 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 GFPT1Q06210 699 aaPredicted RBP9.57□□□□□ -0.88
VPS50-207ENST00000458530 MYO1EQ12965 1108 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 SEZ6Q53EL9 994 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 ZNF667Q5HYK9 610 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 PPP2R2DQ66LE6 453 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 TWF2Q6IBS0 349 aaKnown RBP9.57□□□□□ -0.88
VPS50-207ENST00000458530 JADE1Q6IE81 842 aa9.57□□□□□ -0.88
VPS50-207ENST00000458530 ALKBH5Q6P6C2 394 aaKnown RBP9.57□□□□□ -0.88
VPS50-207ENST00000458530 TRIM72Q6ZMU5 477 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms