RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 SMC4Q9NTJ3 1288 aa4.82□□□□□ -1.64
UBDP1-202ENST00000457888 SPTLC3Q9NUV7 552 aa4.82□□□□□ -1.64
UBDP1-202ENST00000457888 B4GALT6Q9UBX8 382 aa4.82□□□□□ -1.64
UBDP1-202ENST00000457888 BCORQ6W2J9 1755 aa4.82□□□□□ -1.64
UBDP1-202ENST00000457888 PXDNLA1KZ92 1463 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 ANKRD31Q8N7Z5 1873 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 ATP10DQ9P241 1426 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 ABCC12Q96J65 1359 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 KIAA1551Q9HCM1 1747 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 TNKSO95271 1327 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 PTPRCP08575 1304 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 A0A0G2JLW4 131 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 C2orf78A6NCI8 922 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 FOXP2O15409 715 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 MFAP3LO75121 409 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 PRKD3O94806 890 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 ATP2A2P16615 1042 aaKnown RBP4.81□□□□□ -1.64
UBDP1-202ENST00000457888 CHRNA5P30532 468 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 RAB27AP51159 221 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 SCNN1BP51168 640 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 PRELPP51888 382 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 LACTBP83111 547 aaPredicted RBP4.81□□□□□ -1.64
UBDP1-202ENST00000457888 C1QL3Q5VWW1 255 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 PAPD7Q5XG87 772 aaKnown RBP4.81□□□□□ -1.64
UBDP1-202ENST00000457888 CREB3L3Q68CJ9 461 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 FSTL4Q6MZW2 842 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 OLFM4Q6UX06 510 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 CNTD1Q8N815 330 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 MB21D1Q8N884 522 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 ANKRD44Q8N8A2 993 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 CCDC191Q8NCU4 936 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 SMC1BQ8NDV3 1235 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 LINS1Q8NG48 757 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 MTMR8Q96EF0 704 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 TTC1Q99614 292 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 MEIS3Q99687 375 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 STK31Q9BXU1 1019 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 CHMP4AQ9BY43 222 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 IFT22Q9H7X7 185 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 KCNH7Q9NS40 1196 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 SAE1Q9UBE0 346 aaPredicted RBP4.81□□□□□ -1.64
UBDP1-202ENST00000457888 COX11Q9Y6N1 276 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 ARFGEF2Q9Y6D5 1785 aa4.81□□□□□ -1.64
UBDP1-202ENST00000457888 IBTKQ9P2D0 1353 aaPredicted RBP4.8□□□□□ -1.64
UBDP1-202ENST00000457888 SHTN1A0MZ66 631 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 PTPDC1A2A3K4 754 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 RASSF10A6NK89 507 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 GOLGA6L22H0YM25 854 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 SCDO00767 359 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 GABRDO14764 452 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 ZEB2O60315 1214 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 BRINP1O60477 761 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 GAS7O60861 476 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 FKBP9O95302 570 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 PCCAP05165 728 aaPredicted RBP4.8□□□□□ -1.64
UBDP1-202ENST00000457888 SRGNP10124 158 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 DPEP1P16444 411 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 RFX5P48382 616 aaPredicted RBP4.8□□□□□ -1.64
UBDP1-202ENST00000457888 IL2P60568 153 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 SART3Q15020 963 aaKnown RBP4.8□□□□□ -1.64
UBDP1-202ENST00000457888 SF3B3Q15393 1217 aaKnown RBP4.8□□□□□ -1.64
UBDP1-202ENST00000457888 NFE2Q16621 373 aaPredicted RBP4.8□□□□□ -1.64
UBDP1-202ENST00000457888 CRY2Q49AN0 593 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 GAGE13Q4V321 117 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 RNF219Q5W0B1 726 aaPredicted RBP4.8□□□□□ -1.64
UBDP1-202ENST00000457888 SLC4A10Q6U841 1118 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 KIF6Q6ZMV9 814 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 FKBP9P1Q75LS8 142 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 OTOP1Q7RTM1 612 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 RD3Q7Z3Z2 195 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 C2orf69Q8N8R5 385 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 MDGA1Q8NFP4 955 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 FRAT1Q92837 279 aaPredicted RBP4.8□□□□□ -1.64
UBDP1-202ENST00000457888 SUCLG2Q96I99 432 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 UTP14AQ9BVJ6 771 aaKnown RBP4.8□□□□□ -1.64
UBDP1-202ENST00000457888 BRIP1Q9BX63 1249 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 CYP4F11Q9HBI6 524 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 ZBTB40Q9NUA8 1239 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 THG1LQ9NWX6 298 aaKnown RBP4.8□□□□□ -1.64
UBDP1-202ENST00000457888 GABBR1Q9UBS5 961 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 TRMT112Q9UI30 125 aaKnown RBP4.8□□□□□ -1.64
UBDP1-202ENST00000457888 TRHDEQ9UKU6 1024 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 DENND2AQ9ULE3 1009 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 APOBEC2Q9Y235 224 aaKnown RBP4.8□□□□□ -1.64
UBDP1-202ENST00000457888 ZKSCAN5Q9Y2L8 839 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 KIF13BQ9NQT8 1826 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 SCN7AQ01118 1682 aa4.8□□□□□ -1.64
UBDP1-202ENST00000457888 SLX4Q8IY92 1834 aa4.79□□□□□ -1.64
UBDP1-202ENST00000457888 SNAP23O00161 211 aa4.79□□□□□ -1.64
UBDP1-202ENST00000457888 GRM8O00222 908 aa4.79□□□□□ -1.64
UBDP1-202ENST00000457888 TGM5O43548 720 aa4.79□□□□□ -1.64
UBDP1-202ENST00000457888 IPO13O94829 963 aaKnown RBP4.79□□□□□ -1.64
UBDP1-202ENST00000457888 MAP4K4O95819 1239 aaPredicted RBP4.79□□□□□ -1.64
UBDP1-202ENST00000457888 HMGB2P26583 209 aaKnown RBP4.79□□□□□ -1.64
UBDP1-202ENST00000457888 LSSP48449 732 aa4.79□□□□□ -1.64
UBDP1-202ENST00000457888 CLK3P49761 638 aaKnown RBP4.79□□□□□ -1.64
UBDP1-202ENST00000457888 RRP1P56182 461 aaKnown RBP4.79□□□□□ -1.64
UBDP1-202ENST00000457888 TAP1Q03518 808 aa4.79□□□□□ -1.64
UBDP1-202ENST00000457888 RABL6Q3YEC7 729 aaPredicted RBP4.79□□□□□ -1.64
UBDP1-202ENST00000457888 TIGD2Q4W5G0 525 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms