RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 MRE11P49959 708 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 EPHA5P54756 1037 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 TWF1Q12792 350 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 MYBPC2Q14324 1141 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 SCARA3Q6AZY7 606 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 MTSS1LQ765P7 747 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 USP37Q86T82 979 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 CCDC65Q8IXS2 484 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 SYCP3Q8IZU3 236 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 SPRYD3Q8NCJ5 442 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 SAAL1Q96ER3 474 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 PGLYRP2Q96PD5 576 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 TMEM209Q96SK2 561 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 KXD1Q9BQD3 176 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 RTP3Q9BQQ7 232 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 CBWD1Q9BRT8 395 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 PLA2G2FQ9BZM2 168 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 CUEDC2Q9H467 287 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 GDE1Q9NZC3 331 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 PCDHA7Q9UN72 937 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 OBSL1O75147 1896 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 TICRRQ7Z2Z1 1910 aa13.39□□□□□ -0.27
VEGFA-210ENST00000457104 NUP210Q8TEM1 1887 aaPredicted RBP13.38□□□□□ -0.27
VEGFA-210ENST00000457104 GOLGA8IPA6NC78 632 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 GOLGA8JA6NMD2 632 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 H0Y858 1186 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 MOSPD3O75425 235 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 MICAL2O94851 1124 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 ODC1P11926 461 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 DUSP4Q13115 394 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 CENPPQ6IPU0 288 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 EPM2AIP1Q7L775 607 aaPredicted RBP13.38□□□□□ -0.27
VEGFA-210ENST00000457104 NT5DC4Q86YG4 428 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 BRSK2Q8IWQ3 736 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 TTC9BQ8N6N2 239 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 IQUBQ8NA54 791 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 OR10T2Q8NGX3 314 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 CXorf38Q8TB03 319 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 FAM84AQ96KN4 292 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 C7orf25Q9BPX7 421 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 LRRC3Q9BY71 257 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 DNAJC25Q9H1X3 360 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 PCIF1Q9H4Z3 704 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 FAM86C1Q9NVL1 165 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 YIPF1Q9Y548 306 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 PATJQ8NI35 1801 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 FRYLO94915 3013 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 CFAP54Q96N23 3096 aa13.38□□□□□ -0.27
VEGFA-210ENST00000457104 FANCMQ8IYD8 2048 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 MTMR11A4FU01 709 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 CYB561D2O14569 222 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 ZNF197O14709 1029 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 POLR2DO15514 142 aaKnown RBP13.37□□□□□ -0.27
VEGFA-210ENST00000457104 EXTL3O43909 919 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 ECI2O75521 394 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 LDHAP00338 332 aaKnown RBP13.37□□□□□ -0.27
VEGFA-210ENST00000457104 FCARP24071 287 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 CASP1P29466 404 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 ME1P48163 572 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 TAF6P49848 677 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 DNM1Q05193 864 aaKnown RBP13.37□□□□□ -0.27
VEGFA-210ENST00000457104 EHHADHQ08426 723 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 RESP18Q5W5W9 173 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 ATL3Q6DD88 541 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 TANGO2Q6ICL3 276 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 PHLDB3Q6NSJ2 640 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 CCDC105Q8IYK2 499 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 C1orf127Q8N9H9 656 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 ATAD1Q8NBU5 361 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 KCNG4Q8TDN1 519 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 ZNF512Q96ME7 567 aaPredicted RBP13.37□□□□□ -0.27
VEGFA-210ENST00000457104 ZSWIM3Q96MP5 696 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 PYM1Q9BRP8 204 aaKnown RBP13.37□□□□□ -0.27
VEGFA-210ENST00000457104 LRRC27Q9C0I9 530 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 TMEM206Q9H813 350 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 TBC1D17Q9HA65 648 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 PDE11AQ9HCR9 933 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 ARHGEF3Q9NR81 526 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 RBAKQ9NYW8 714 aaPredicted RBP13.37□□□□□ -0.27
VEGFA-210ENST00000457104 RCOR1Q9UKL0 485 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 SLC27A5Q9Y2P5 690 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 ZNF638Q14966 1978 aaKnown RBP13.37□□□□□ -0.27
VEGFA-210ENST00000457104 GREB1Q4ZG55 1949 aa13.37□□□□□ -0.27
VEGFA-210ENST00000457104 CACNA1IQ9P0X4 2223 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 KIF26AQ9ULI4 1882 aaPredicted RBP13.36□□□□□ -0.27
VEGFA-210ENST00000457104 KPNA7A9QM74 516 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 GJA1P17302 382 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 STARD6P59095 220 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 ASIC1P78348 528 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 TFAMQ00059 246 aaKnown RBP13.36□□□□□ -0.27
VEGFA-210ENST00000457104 AMPD3Q01432 767 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 FAM78AQ5JUQ0 283 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 CYP4A22Q5TCH4 519 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 WSCD1Q658N2 575 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 IQCEQ6IPM2 695 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 PDZD4Q76G19 769 aaPredicted RBP13.36□□□□□ -0.27
VEGFA-210ENST00000457104 LRRTM3Q86VH5 581 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 TMC8Q8IU68 726 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 ELMOD1Q8N336 334 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 DTWD2Q8NBA8 298 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms