RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 SAAL1Q96ER3 474 aa19.3■□□□□ 0.68
MSH6-207ENST00000456246 ZNF512Q96ME7 567 aaPredicted RBP19.3■□□□□ 0.68
MSH6-207ENST00000456246 CBWD1Q9BRT8 395 aa19.3■□□□□ 0.68
MSH6-207ENST00000456246 FGFBP2Q9BYJ0 223 aa19.3■□□□□ 0.68
MSH6-207ENST00000456246 KIAA1586Q9HCI6 787 aa19.3■□□□□ 0.68
MSH6-207ENST00000456246 YIPF1Q9Y548 306 aa19.3■□□□□ 0.68
MSH6-207ENST00000456246 NOTCH4Q99466 2003 aa19.3■□□□□ 0.68
MSH6-207ENST00000456246 SCN1AP35498 2009 aa19.29■□□□□ 0.68
MSH6-207ENST00000456246 PVALEFA0A1B0GWK0 134 aa19.29■□□□□ 0.68
MSH6-207ENST00000456246 SPTLC1O15269 473 aa19.29■□□□□ 0.68
MSH6-207ENST00000456246 NARSO43776 548 aaKnown RBP19.29■□□□□ 0.68
MSH6-207ENST00000456246 CFHP08603 1231 aa19.29■□□□□ 0.68
MSH6-207ENST00000456246 HOXD11P31277 338 aaPredicted RBP19.29■□□□□ 0.68
MSH6-207ENST00000456246 TFAMQ00059 246 aaKnown RBP19.29■□□□□ 0.68
MSH6-207ENST00000456246 TWF1Q12792 350 aa19.29■□□□□ 0.68
MSH6-207ENST00000456246 SURF1Q15526 300 aa19.29■□□□□ 0.68
MSH6-207ENST00000456246 CEP57L1Q8IYX8 460 aa19.29■□□□□ 0.68
MSH6-207ENST00000456246 THEM5Q8N1Q8 247 aa19.29■□□□□ 0.68
MSH6-207ENST00000456246 TMEM130Q8N3G9 435 aa19.29■□□□□ 0.68
MSH6-207ENST00000456246 PRSS33Q8NF86 280 aa19.29■□□□□ 0.68
MSH6-207ENST00000456246 FGF14Q92915 247 aa19.29■□□□□ 0.68
MSH6-207ENST00000456246 RTP3Q9BQQ7 232 aa19.29■□□□□ 0.68
MSH6-207ENST00000456246 CORO1BQ9BR76 489 aa19.29■□□□□ 0.68
MSH6-207ENST00000456246 ASAH2Q9NR71 780 aa19.29■□□□□ 0.68
MSH6-207ENST00000456246 ITGA11Q9UKX5 1188 aa19.29■□□□□ 0.68
MSH6-207ENST00000456246 ATP6V1DQ9Y5K8 247 aa19.29■□□□□ 0.68
MSH6-207ENST00000456246 TSC2P49815 1807 aa19.29■□□□□ 0.68
MSH6-207ENST00000456246 KPNA7A9QM74 516 aa19.28■□□□□ 0.68
MSH6-207ENST00000456246 CYB561D2O14569 222 aa19.28■□□□□ 0.68
MSH6-207ENST00000456246 ALDH1A3P47895 512 aa19.28■□□□□ 0.68
MSH6-207ENST00000456246 EPHA5P54756 1037 aa19.28■□□□□ 0.68
MSH6-207ENST00000456246 KRT85P78386 507 aa19.28■□□□□ 0.68
MSH6-207ENST00000456246 PFKPQ01813 784 aa19.28■□□□□ 0.68
MSH6-207ENST00000456246 SLC5A9Q2M3M2 681 aa19.28■□□□□ 0.68
MSH6-207ENST00000456246 PRSS36Q5K4E3 855 aa19.28■□□□□ 0.68
MSH6-207ENST00000456246 PARM1Q6UWI2 310 aa19.28■□□□□ 0.68
MSH6-207ENST00000456246 EPM2AIP1Q7L775 607 aaPredicted RBP19.28■□□□□ 0.68
MSH6-207ENST00000456246 LRRC52Q8N7C0 313 aa19.28■□□□□ 0.68
MSH6-207ENST00000456246 FLCNQ8NFG4 579 aa19.28■□□□□ 0.68
MSH6-207ENST00000456246 ZNF507Q8TCN5 953 aa19.28■□□□□ 0.68
MSH6-207ENST00000456246 USP25Q9UHP3 1055 aa19.28■□□□□ 0.68
MSH6-207ENST00000456246 ASB3Q9Y575 518 aa19.28■□□□□ 0.68
MSH6-207ENST00000456246 WDFY4Q6ZS81 3184 aa19.28■□□□□ 0.68
MSH6-207ENST00000456246 MTMR11A4FU01 709 aa19.27■□□□□ 0.68
MSH6-207ENST00000456246 ZNF233A6NK53 670 aa19.27■□□□□ 0.68
MSH6-207ENST00000456246 GALR2O43603 387 aaPredicted RBP19.27■□□□□ 0.68
MSH6-207ENST00000456246 ECI2O75521 394 aa19.27■□□□□ 0.68
MSH6-207ENST00000456246 TMEM191BP0C7N4 346 aa19.27■□□□□ 0.68
MSH6-207ENST00000456246 AOC1P19801 751 aa19.27■□□□□ 0.68
MSH6-207ENST00000456246 RFX1P22670 979 aa19.27■□□□□ 0.68
MSH6-207ENST00000456246 EPHB3P54753 998 aa19.27■□□□□ 0.68
MSH6-207ENST00000456246 EHHADHQ08426 723 aa19.27■□□□□ 0.68
MSH6-207ENST00000456246 CWF19L1Q69YN2 538 aaKnown RBP19.27■□□□□ 0.68
MSH6-207ENST00000456246 CENPPQ6IPU0 288 aa19.27■□□□□ 0.68
MSH6-207ENST00000456246 HS2ST1Q7LGA3 356 aa19.27■□□□□ 0.68
MSH6-207ENST00000456246 TMEM105Q8N8V8 129 aa19.27■□□□□ 0.68
MSH6-207ENST00000456246 SPATA18Q8TC71 538 aa19.27■□□□□ 0.68
MSH6-207ENST00000456246 GPR152Q8TDT2 470 aa19.27■□□□□ 0.68
MSH6-207ENST00000456246 C2orf15Q8WU43 125 aaKnown RBP19.27■□□□□ 0.68
MSH6-207ENST00000456246 ING5Q8WYH8 240 aa19.27■□□□□ 0.68
MSH6-207ENST00000456246 PGLYRP2Q96PD5 576 aa19.27■□□□□ 0.68
MSH6-207ENST00000456246 ARHGEF3Q9NR81 526 aa19.27■□□□□ 0.68
MSH6-207ENST00000456246 CGNQ9P2M7 1197 aaKnown RBP19.27■□□□□ 0.68
MSH6-207ENST00000456246 R3HCC1Q9Y3T6 440 aaKnown RBP19.27■□□□□ 0.68
MSH6-207ENST00000456246 TCHHQ07283 1943 aa19.27■□□□□ 0.67
MSH6-207ENST00000456246 GOLGA8IPA6NC78 632 aa19.26■□□□□ 0.67
MSH6-207ENST00000456246 GOLGA8JA6NMD2 632 aa19.26■□□□□ 0.67
MSH6-207ENST00000456246 ITGB3P05106 788 aa19.26■□□□□ 0.67
MSH6-207ENST00000456246 OR4Q2P0C623 313 aa19.26■□□□□ 0.67
MSH6-207ENST00000456246 SLFN14P0C7P3 912 aa19.26■□□□□ 0.67
MSH6-207ENST00000456246 CEBPBP17676 345 aa19.26■□□□□ 0.67
MSH6-207ENST00000456246 POLR2BP30876 1174 aaKnown RBP19.26■□□□□ 0.67
MSH6-207ENST00000456246 TCF15Q12870 199 aa19.26■□□□□ 0.67
MSH6-207ENST00000456246 DUSP4Q13115 394 aa19.26■□□□□ 0.67
MSH6-207ENST00000456246 PHLDB3Q6NSJ2 640 aa19.26■□□□□ 0.67
MSH6-207ENST00000456246 C1orf127Q8N9H9 656 aa19.26■□□□□ 0.67
MSH6-207ENST00000456246 NOC3LQ8WTT2 800 aaKnown RBP19.26■□□□□ 0.67
MSH6-207ENST00000456246 HPS3Q969F9 1004 aa19.26■□□□□ 0.67
MSH6-207ENST00000456246 BORCS6Q96GS4 357 aa19.26■□□□□ 0.67
MSH6-207ENST00000456246 SHDQ96IW2 340 aa19.26■□□□□ 0.67
MSH6-207ENST00000456246 ANKRD36BP1Q96IX9 119 aa19.26■□□□□ 0.67
MSH6-207ENST00000456246 SPATA32Q96LK8 384 aa19.26■□□□□ 0.67
MSH6-207ENST00000456246 GPR88Q9GZN0 384 aa19.26■□□□□ 0.67
MSH6-207ENST00000456246 ZCWPW1Q9H0M4 648 aa19.26■□□□□ 0.67
MSH6-207ENST00000456246 PCIF1Q9H4Z3 704 aa19.26■□□□□ 0.67
MSH6-207ENST00000456246 HSPBP1Q9NZL4 362 aa19.26■□□□□ 0.67
MSH6-207ENST00000456246 CEP72Q9P209 647 aa19.26■□□□□ 0.67
MSH6-207ENST00000456246 FGF19O95750 216 aa19.25■□□□□ 0.67
MSH6-207ENST00000456246 MYL1P05976 194 aa19.25■□□□□ 0.67
MSH6-207ENST00000456246 NPR3P17342 541 aa19.25■□□□□ 0.67
MSH6-207ENST00000456246 CMA1P23946 247 aa19.25■□□□□ 0.67
MSH6-207ENST00000456246 TUFMP49411 452 aaKnown RBP19.25■□□□□ 0.67
MSH6-207ENST00000456246 RBP5P82980 135 aa19.25■□□□□ 0.67
MSH6-207ENST00000456246 BMT2Q1RMZ1 405 aa19.25■□□□□ 0.67
MSH6-207ENST00000456246 ITIH5Q86UX2 942 aa19.25■□□□□ 0.67
MSH6-207ENST00000456246 TMEM86AQ8N2M4 240 aa19.25■□□□□ 0.67
MSH6-207ENST00000456246 GLIS3Q8NEA6 775 aa19.25■□□□□ 0.67
MSH6-207ENST00000456246 ZSWIM2Q8NEG5 633 aa19.25■□□□□ 0.67
MSH6-207ENST00000456246 OR10T2Q8NGX3 314 aa19.25■□□□□ 0.67
MSH6-207ENST00000456246 SPPL2BQ8TCT7 592 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms