RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 BRD9Q9H8M2 597 aa4.74□□□□□ -1.65
R3HDM1-212ENST00000456040 KCTD5Q9NXV2 234 aa4.74□□□□□ -1.65
R3HDM1-212ENST00000456040 LRIT1Q9P2V4 623 aa4.74□□□□□ -1.65
R3HDM1-212ENST00000456040 SLC45A2Q9UMX9 530 aa4.74□□□□□ -1.65
R3HDM1-212ENST00000456040 CCDC195A0A1B0GUA6 201 aa4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 NT5C1B-RDH14C9J2C7 533 aa4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 VCAM1P19320 739 aa4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 PLA2G5P39877 138 aa4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 FXR1P51114 621 aaKnown RBP eCLIP4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 NEK2P51955 445 aa4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 POU6F2P78424 691 aaPredicted RBP4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 MRPS35P82673 323 aaKnown RBP4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 FAM177A1Q8N128 213 aaPredicted RBP4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 CFAP52Q8N1V2 620 aa4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 PRR18Q8N4B5 295 aa4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 PDPRQ8NCN5 879 aa4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 TMIEQ8NEW7 156 aa4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 SSH3Q8TE77 659 aa4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 SCAMP4Q969E2 229 aa4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 TMEM125Q96AQ2 219 aa4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 HSPBAP1Q96EW2 488 aa4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 TYW1Q9NV66 732 aaKnown RBP4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 INTS13Q9NVM9 706 aa4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 RLIMQ9NVW2 624 aa4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 CTTNBP2NLQ9P2B4 639 aa4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 CFAP97Q9P2B7 532 aa4.73□□□□□ -1.65
R3HDM1-212ENST00000456040 TOR1BO14657 336 aa4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 PEX1O43933 1283 aa4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 GJB1P08034 283 aa4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 POU2F2P09086 479 aa4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 SRGNP10124 158 aa4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 AKAP5P24588 427 aa4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 ANXA11P50995 505 aaKnown RBP4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 DYRK1AQ13627 763 aa4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 ZNF169Q14929 603 aaPredicted RBP4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 SF3B3Q15393 1217 aaKnown RBP4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 PREPLQ4J6C6 727 aaPredicted RBP4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 SCARB1Q8WTV0 552 aa4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 SNX19Q92543 992 aa4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 RGMAQ96B86 450 aa4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 SMOQ99835 787 aa4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 DUSP26Q9BV47 211 aa4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 WDCPQ9H6R7 721 aa4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 TCF7L1Q9HCS4 588 aa4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 AASDHPPTQ9NRN7 309 aa4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 RNF7Q9UBF6 113 aa4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 PCDHA3Q9Y5H8 950 aa4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 SALL3Q9BXA9 1300 aa4.72□□□□□ -1.65
R3HDM1-212ENST00000456040 LRRC14BA6NHZ5 514 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 E7ENX8 843 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 YY2O15391 372 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 SUN1O94901 812 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 CHEK2O96017 543 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 FTLP02792 175 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 PRDX5P30044 214 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 FOLR3P41439 243 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 PIK3CGP48736 1102 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 RARRES1P49788 294 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 HK3P52790 923 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 IGBP1P78318 339 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 TAP2Q03519 686 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 MAPK7Q13164 816 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 NOGQ13253 232 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 PGS1Q32NB8 556 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 CD300EQ496F6 205 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 HEATR3Q7Z4Q2 680 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 SIMC1Q8NDZ2 872 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 NSUN7Q8NE18 718 aaKnown RBP4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 ACTRT2Q8TDY3 377 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 FAM167AQ96KS9 214 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 TRIB1Q96RU8 372 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 NUP88Q99567 741 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 SIK2Q9H0K1 926 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 SLAMF7Q9NQ25 335 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 KMT5AQ9NQR1 393 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 VSX1Q9NZR4 365 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 ABCF2Q9UG63 623 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 FEZ2Q9UHY8 353 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 TLK1Q9UKI8 766 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 ANKRD6Q9Y2G4 727 aa4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 POLR2AP24928 1970 aaKnown RBP4.71□□□□□ -1.66
R3HDM1-212ENST00000456040 LOC105371045A0A1W2PR82 267 aa4.7□□□□□ -1.66
R3HDM1-212ENST00000456040 ZNF785A8K8V0 405 aa4.7□□□□□ -1.66
R3HDM1-212ENST00000456040 POLRMTO00411 1230 aaKnown RBP4.7□□□□□ -1.66
R3HDM1-212ENST00000456040 RARBP10826 455 aa4.7□□□□□ -1.66
R3HDM1-212ENST00000456040 GATA3P23771 443 aa4.7□□□□□ -1.66
R3HDM1-212ENST00000456040 PSMC1P62191 440 aaKnown RBP4.7□□□□□ -1.66
R3HDM1-212ENST00000456040 SIM1P81133 766 aaPredicted RBP4.7□□□□□ -1.66
R3HDM1-212ENST00000456040 HLXQ14774 488 aaPredicted RBP4.7□□□□□ -1.66
R3HDM1-212ENST00000456040 TAPT1Q6NXT6 567 aa4.7□□□□□ -1.66
R3HDM1-212ENST00000456040 VWA1Q6PCB0 445 aa4.7□□□□□ -1.66
R3HDM1-212ENST00000456040 FAM90A1Q86YD7 464 aa4.7□□□□□ -1.66
R3HDM1-212ENST00000456040 ADGRG5Q8IZF4 528 aa4.7□□□□□ -1.66
R3HDM1-212ENST00000456040 HOOK2Q96ED9 719 aa4.7□□□□□ -1.66
R3HDM1-212ENST00000456040 HEPHQ9BQS7 1158 aa4.7□□□□□ -1.66
R3HDM1-212ENST00000456040 CNPPD1Q9BV87 410 aa4.7□□□□□ -1.66
R3HDM1-212ENST00000456040 GPR35Q9HC97 309 aa4.7□□□□□ -1.66
R3HDM1-212ENST00000456040 KIAA1586Q9HCI6 787 aa4.7□□□□□ -1.66
R3HDM1-212ENST00000456040 LMBRD1Q9NUN5 540 aa4.7□□□□□ -1.66
R3HDM1-212ENST00000456040 FOXJ2Q9P0K8 574 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms