RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 KIAA1549LQ6ZVL6 1849 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TCHHQ07283 1943 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 FASNP49327 2511 aaKnown RBP6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 MTMR11A4FU01 709 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 OTOL1A6NHN0 477 aaPredicted RBP6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SPECC1L-ADORA2AF8WAN1 911 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 H7C4K7 107 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SCAMP3O14828 347 aaKnown RBP6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ADRB1P08588 477 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 MAPTP10636 758 aaKnown RBP6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 MCF2P10911 925 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 KCNE1P15382 129 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ATF6P18850 670 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 MAGEA9P43362 315 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 GPR15P49685 360 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 FXR2P51116 673 aaKnown RBP eCLIP6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CCR3P51677 355 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 EPHA5P54756 1037 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 YWHAHQ04917 246 aaPredicted RBP6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PTGDRQ13258 359 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 MRPL58Q14197 206 aaKnown RBP6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ENOX2Q16206 610 aaKnown RBP6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 GPR158Q5T848 1215 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SDHAF4Q5VUM1 108 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 RINT1Q6NUQ1 792 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CEP68Q76N32 757 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 YAF2Q8IY57 180 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TMEM161BQ8NDZ6 487 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 NETO1Q8TDF5 533 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 IRF7Q92985 503 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 FAM212AQ96EL1 285 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 BICD1Q96G01 975 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ACAP3Q96P50 834 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 HHIPQ96QV1 700 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 AVENQ9NQS1 362 aaPredicted RBP6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SLC38A7Q9NVC3 462 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 AFF4Q9UHB7 1163 aaKnown RBP6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PCDHB8Q9UN66 801 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CCL26Q9Y258 94 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ANKRD11Q6UB99 2663 aaPredicted RBP6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ZNF638Q14966 1978 aaKnown RBP6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CELSR3Q9NYQ7 3312 aa6.53□□□□□ -1.36
HLA-DPA3-207ENST00000454398 FREM2Q5SZK8 3169 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 GON4LQ3T8J9 2241 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 K7ENM7 598 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 MAN2B1O00754 1011 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ZNF197O14709 1029 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 SLC30A4O14863 429 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 HNRNPDLO14979 420 aaKnown RBP6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 AXIN1O15169 862 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 NCAM2O15394 837 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 EPB41L2O43491 1005 aaKnown RBP6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 HCRTO43612 131 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TOM1L1O75674 476 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 RETP07949 1114 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 XRCC6P12956 609 aaKnown RBP eCLIP6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ARSAP15289 507 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 SPINK2P20155 84 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 GABRR2P28476 465 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CXCL12P48061 93 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ANAPC15P60006 121 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 PPP2R3AQ06190 1150 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 FCHO2Q0JRZ9 810 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 STRN3Q13033 797 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 DHX8Q14562 1220 aaKnown RBP6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 AASDHQ4L235 1098 aaPredicted RBP6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 SLC39A12Q504Y0 691 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TPGS2Q68CL5 300 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 OVOS1Q6IE37 1185 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 JADE1Q6IE81 842 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 SLC39A4Q6P5W5 647 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 C1orf186Q6ZWK4 172 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 APBB1IPQ7Z5R6 666 aaPredicted RBP6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 KBTBD6Q86V97 674 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ARID3BQ8IVW6 561 aaPredicted RBP6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 IGSF22Q8N9C0 903 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 FAM200AQ8TCP9 573 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CSGALNACT1Q8TDX6 532 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 GIPC2Q8TF65 315 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 DEPDC1BQ8WUY9 529 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 DRC1Q96MC2 740 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ZNF512Q96ME7 567 aaPredicted RBP6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 PNMA5Q96PV4 448 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 RTKNQ9BST9 563 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ARRDC1-AS1Q9H2J1 176 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ATXN3LQ9H3M9 355 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ABI2Q9NYB9 513 aaPredicted RBP6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 DENND4CQ5VZ89 1909 aa6.52□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TTC26A0AVF1 554 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 MYBPHLA2RUH7 354 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 VWA3AA6NCI4 1184 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 LACTBL1A8MY62 500 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 PRR5-ARHGAP8B1AHC4 643 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 M0QZQ0 153 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 DCLK1O15075 740 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 FAM189A1O60320 539 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TADA3O75528 432 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 EGFP01133 1207 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 PLS3P13797 630 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 MARCKSP29966 332 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms