RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 TSPYL2Q9H2G4 693 aaPredicted RBP6.42□□□□□ -1.38
SDC4P-201ENST00000453285 SMYD3Q9H7B4 428 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 RSAD1Q9HA92 442 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 CYP3A43Q9HB55 503 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 GOLGA2P5Q9HBQ8 144 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 TAS2R14Q9NYV8 317 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 NXF1Q9UBU9 619 aaKnown RBP6.42□□□□□ -1.38
SDC4P-201ENST00000453285 TBX21Q9UL17 535 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 INTUQ9ULD6 942 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 NME7Q9Y5B8 376 aa6.42□□□□□ -1.38
SDC4P-201ENST00000453285 PATJQ8NI35 1801 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 BTNL10A8MVZ5 291 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 DCDC2CA8MYV0 355 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 KIF2AO00139 706 aaPredicted RBP6.41□□□□□ -1.38
SDC4P-201ENST00000453285 KRT86O43790 486 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 RTN2O75298 545 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 CILPO75339 1184 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 IPO7O95373 1038 aaKnown RBP6.41□□□□□ -1.38
SDC4P-201ENST00000453285 TUBB4AP04350 444 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 CYP1A1P04798 512 aaPredicted RBP6.41□□□□□ -1.38
SDC4P-201ENST00000453285 THP07101 528 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 H2AFZP0C0S5 128 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 GZMAP12544 262 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 UNGP13051 313 aaPredicted RBP6.41□□□□□ -1.38
SDC4P-201ENST00000453285 CAPN2P17655 700 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 CD58P19256 250 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 HOXD11P31277 338 aaPredicted RBP6.41□□□□□ -1.38
SDC4P-201ENST00000453285 CYP2C18P33260 490 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 PDE6CP51160 858 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 SCNN1GP51170 649 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 GALCP54803 685 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 CCL23P55773 120 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 YWHAEP62258 255 aaKnown RBP6.41□□□□□ -1.38
SDC4P-201ENST00000453285 INCA1Q0VD86 236 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 KIF5AQ12840 1032 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 MYO1EQ12965 1108 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 LRRC26Q2I0M4 334 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 SOWAHAQ2M3V2 549 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 ARHGAP29Q52LW3 1261 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 TAF3Q5VWG9 929 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 ACAD10Q6JQN1 1059 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 CD300LGQ6UXG3 332 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 SYT10Q6XYQ8 523 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 FAM43BQ6ZT52 329 aaPredicted RBP6.41□□□□□ -1.38
SDC4P-201ENST00000453285 H2AFVQ71UI9 128 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 VPS36Q86VN1 386 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 ZNF677Q86XU0 584 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 SLC35F6Q8N357 371 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 SLC4A11Q8NBS3 891 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 ZNF606Q8WXB4 792 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 TFAP2BQ92481 460 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 SCLYQ96I15 445 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 MRPL45Q9BRJ2 306 aaKnown RBP6.41□□□□□ -1.38
SDC4P-201ENST00000453285 FTHL17Q9BXU8 183 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 TSGA10Q9BZW7 698 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 ELOVL4Q9GZR5 314 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 HIPK3Q9H422 1215 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 FAM124BQ9H5Z6 455 aaPredicted RBP6.41□□□□□ -1.38
SDC4P-201ENST00000453285 C11orf49Q9H6J7 331 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 ELAC1Q9H777 363 aaKnown RBP6.41□□□□□ -1.38
SDC4P-201ENST00000453285 UBN1Q9NPG3 1134 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 SLC38A7Q9NVC3 462 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 GDAP2Q9NXN4 497 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 MYO1AQ9UBC5 1043 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 CACNG4Q9UBN1 327 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 HMGXB4Q9UGU5 601 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 GUCA1BQ9UMX6 200 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 PAXBP1Q9Y5B6 917 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 COL4A6Q14031 1691 aa6.41□□□□□ -1.38
SDC4P-201ENST00000453285 A0A0A6YYK5 440 aaPredicted RBP6.4□□□□□ -1.38
SDC4P-201ENST00000453285 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.4□□□□□ -1.38
SDC4P-201ENST00000453285 ANKRD62A6NC57 917 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 TMCO5BA8MYB1 307 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 KPNA7A9QM74 516 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 THAP12O43422 761 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 B4GALT3O60512 393 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 TACC1O75410 805 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 DDHD2O94830 711 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 MOCS3O95396 460 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 PARNO95453 639 aaKnown RBP6.4□□□□□ -1.38
SDC4P-201ENST00000453285 POMCP01189 267 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 FTLP02792 175 aaPredicted RBP6.4□□□□□ -1.38
SDC4P-201ENST00000453285 PAEPP09466 180 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 FAM163BP0C2L3 166 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 TMEM253P0C7T8 217 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 FGFR1P11362 822 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 P4HA1P13674 534 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 BRD2P25440 801 aaKnown RBP6.4□□□□□ -1.38
SDC4P-201ENST00000453285 ITGB8P26012 769 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 GNA15P30679 374 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 RPL9P32969 192 aaKnown RBP6.4□□□□□ -1.38
SDC4P-201ENST00000453285 CDH5P33151 784 aaPredicted RBP6.4□□□□□ -1.38
SDC4P-201ENST00000453285 PNPLA4P41247 253 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 AARSP49588 968 aaKnown RBP eCLIP6.4□□□□□ -1.38
SDC4P-201ENST00000453285 TAF6P49848 677 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 CLCNKBP51801 687 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 NDST1P52848 882 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 LILRA4P59901 499 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 GNG11P61952 73 aa6.4□□□□□ -1.38
SDC4P-201ENST00000453285 TNNC1P63316 161 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms