RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 RHOT2Q8IXI1 618 aa19.67■□□□□ 0.74
PTPA-223ENST00000452489 PNMA1Q8ND90 353 aa19.67■□□□□ 0.74
PTPA-223ENST00000452489 SLC35C1Q96A29 364 aa19.67■□□□□ 0.74
PTPA-223ENST00000452489 GCNAQ96QF7 691 aa19.67■□□□□ 0.74
PTPA-223ENST00000452489 HNRNPABQ99729 332 aaKnown RBP19.67■□□□□ 0.74
PTPA-223ENST00000452489 ANKRD2Q9GZV1 360 aa19.67■□□□□ 0.74
PTPA-223ENST00000452489 TTLL13PA6NNM8 815 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 E9PMD0 336 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 H3BSA7 217 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 GOLGA8HP0CJ92 632 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 MYL2P10916 166 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 PLS3P13797 630 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 MAGEA4P43358 317 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 PTK6Q13882 451 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 KIF22Q14807 665 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 TMC7Q7Z402 723 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 GIPC3Q8TF64 312 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 SLCO2A1Q92959 643 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 CD101Q93033 1021 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 MRPL1Q9BYD6 325 aaKnown RBP19.66■□□□□ 0.74
PTPA-223ENST00000452489 LIN28AQ9H9Z2 209 aaKnown RBP19.66■□□□□ 0.74
PTPA-223ENST00000452489 DNAJC12Q9UKB3 198 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 MTO1Q9Y2Z2 717 aaKnown RBP19.66■□□□□ 0.74
PTPA-223ENST00000452489 SMCO2A6NFE2 343 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 SORBS3O60504 671 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 DLDP09622 509 aaKnown RBP19.66■□□□□ 0.74
PTPA-223ENST00000452489 HDAC4P56524 1084 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 PDCD4Q53EL6 469 aaKnown RBP19.66■□□□□ 0.74
PTPA-223ENST00000452489 SLC20A1Q8WUM9 679 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 UIMC1Q96RL1 719 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 RBM15Q96T37 977 aaKnown RBP eCLIP19.66■□□□□ 0.74
PTPA-223ENST00000452489 TSSK1BQ9BXA7 367 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 GPR88Q9GZN0 384 aa19.66■□□□□ 0.74
PTPA-223ENST00000452489 SH3PXD2BA1X283 911 aa19.65■□□□□ 0.74
PTPA-223ENST00000452489 WDR46O15213 610 aaKnown RBP19.65■□□□□ 0.74
PTPA-223ENST00000452489 SPTLC1O15269 473 aa19.65■□□□□ 0.74
PTPA-223ENST00000452489 SPOPO43791 374 aa19.65■□□□□ 0.74
PTPA-223ENST00000452489 ADAM23O75077 832 aa19.65■□□□□ 0.74
PTPA-223ENST00000452489 CAMTA2O94983 1202 aa19.65■□□□□ 0.74
PTPA-223ENST00000452489 FTLP02792 175 aaPredicted RBP19.65■□□□□ 0.74
PTPA-223ENST00000452489 NAT1P18440 290 aa19.65■□□□□ 0.74
PTPA-223ENST00000452489 PFKPQ01813 784 aa19.65■□□□□ 0.74
PTPA-223ENST00000452489 HSP90AA5PQ58FG0 334 aa19.65■□□□□ 0.74
PTPA-223ENST00000452489 RC3H1Q5TC82 1133 aaKnown RBP19.65■□□□□ 0.74
PTPA-223ENST00000452489 C3orf62Q6ZUJ4 267 aa19.65■□□□□ 0.74
PTPA-223ENST00000452489 FAM118BQ9BPY3 351 aa19.65■□□□□ 0.74
PTPA-223ENST00000452489 MANSC1Q9H8J5 431 aa19.65■□□□□ 0.74
PTPA-223ENST00000452489 IL17RBQ9NRM6 502 aa19.65■□□□□ 0.74
PTPA-223ENST00000452489 SELENONQ9NZV5 590 aa19.65■□□□□ 0.74
PTPA-223ENST00000452489 MEGF6O75095 1541 aa19.65■□□□□ 0.74
PTPA-223ENST00000452489 FKBP6O75344 327 aa19.65■□□□□ 0.74
PTPA-223ENST00000452489 PMLP29590 882 aa19.65■□□□□ 0.74
PTPA-223ENST00000452489 PLCB3Q01970 1234 aa19.65■□□□□ 0.74
PTPA-223ENST00000452489 TRIP10Q15642 601 aa19.65■□□□□ 0.74
PTPA-223ENST00000452489 ZNF746Q6NUN9 644 aaPredicted RBP19.65■□□□□ 0.74
PTPA-223ENST00000452489 GFM2Q969S9 779 aaKnown RBP19.65■□□□□ 0.74
PTPA-223ENST00000452489 PPP1R10Q96QC0 940 aaKnown RBP19.65■□□□□ 0.74
PTPA-223ENST00000452489 WNT8AQ9H1J5 351 aa19.65■□□□□ 0.74
PTPA-223ENST00000452489 SLC17A7Q9P2U7 560 aa19.65■□□□□ 0.74
PTPA-223ENST00000452489 FAM237BA0A1B0GVD1 139 aa19.64■□□□□ 0.74
PTPA-223ENST00000452489 HOXA7P31268 230 aaPredicted RBP19.64■□□□□ 0.74
PTPA-223ENST00000452489 VCPP55072 806 aaKnown RBP19.64■□□□□ 0.74
PTPA-223ENST00000452489 FASTKD3Q14CZ7 662 aaKnown RBP19.64■□□□□ 0.74
PTPA-223ENST00000452489 ANKDD1AQ495B1 522 aa19.64■□□□□ 0.74
PTPA-223ENST00000452489 ADGRG6Q86SQ4 1221 aa19.64■□□□□ 0.74
PTPA-223ENST00000452489 PIP4K2CQ8TBX8 421 aa19.64■□□□□ 0.74
PTPA-223ENST00000452489 SLC26A7Q8TE54 656 aa19.64■□□□□ 0.74
PTPA-223ENST00000452489 USP6NLQ92738 828 aa19.64■□□□□ 0.74
PTPA-223ENST00000452489 BMP2KQ9NSY1 1161 aaPredicted RBP19.64■□□□□ 0.74
PTPA-223ENST00000452489 APPL1Q9UKG1 709 aa19.64■□□□□ 0.74
PTPA-223ENST00000452489 HBS1LQ9Y450 684 aaKnown RBP19.64■□□□□ 0.74
PTPA-223ENST00000452489 DCAF8L1A6NGE4 600 aa19.64■□□□□ 0.73
PTPA-223ENST00000452489 MEI4A8MW99 385 aa19.64■□□□□ 0.73
PTPA-223ENST00000452489 LRRN2O75325 713 aa19.64■□□□□ 0.73
PTPA-223ENST00000452489 PIAS1O75925 651 aa19.64■□□□□ 0.73
PTPA-223ENST00000452489 CA8P35219 290 aa19.64■□□□□ 0.73
PTPA-223ENST00000452489 HADHBP55084 474 aaKnown RBP19.64■□□□□ 0.73
PTPA-223ENST00000452489 GK3PQ14409 553 aa19.64■□□□□ 0.73
PTPA-223ENST00000452489 ZYXQ15942 572 aaKnown RBP19.64■□□□□ 0.73
PTPA-223ENST00000452489 ARHGAP44Q17R89 818 aa19.64■□□□□ 0.73
PTPA-223ENST00000452489 ARSHQ5FYA8 562 aa19.64■□□□□ 0.73
PTPA-223ENST00000452489 MAP3K21Q5TCX8 1036 aa19.64■□□□□ 0.73
PTPA-223ENST00000452489 PCNX4Q63HM2 1172 aa19.64■□□□□ 0.73
PTPA-223ENST00000452489 THOC7Q6I9Y2 204 aaKnown RBP19.64■□□□□ 0.73
PTPA-223ENST00000452489 SFR1Q86XK3 245 aa19.64■□□□□ 0.73
PTPA-223ENST00000452489 SNX27Q96L92 541 aa19.64■□□□□ 0.73
PTPA-223ENST00000452489 HERPUD2Q9BSE4 406 aa19.64■□□□□ 0.73
PTPA-223ENST00000452489 SAYSD1Q9NPB0 183 aa19.64■□□□□ 0.73
PTPA-223ENST00000452489 ARHGAP10A1A4S6 786 aa19.63■□□□□ 0.73
PTPA-223ENST00000452489 CAPN8A6NHC0 703 aa19.63■□□□□ 0.73
PTPA-223ENST00000452489 GOLGA8RI6L899 631 aa19.63■□□□□ 0.73
PTPA-223ENST00000452489 HOXD13P35453 343 aa19.63■□□□□ 0.73
PTPA-223ENST00000452489 ENTPD1P49961 510 aa19.63■□□□□ 0.73
PTPA-223ENST00000452489 CAV1Q03135 178 aa19.63■□□□□ 0.73
PTPA-223ENST00000452489 C16orf72Q14CZ0 275 aa19.63■□□□□ 0.73
PTPA-223ENST00000452489 SEPT7Q16181 437 aaKnown RBP19.63■□□□□ 0.73
PTPA-223ENST00000452489 ADRM1Q16186 407 aa19.63■□□□□ 0.73
PTPA-223ENST00000452489 GRAMD1BQ3KR37 738 aa19.63■□□□□ 0.73
PTPA-223ENST00000452489 IZUMO3Q5VZ72 239 aa19.63■□□□□ 0.73
PTPA-223ENST00000452489 PPP4R3CPQ6ZMV5 832 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms