RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 SRPK1Q96SB4 655 aaKnown RBP9.1□□□□□ -0.95
LSM5-208ENST00000450169 POP1Q99575 1024 aaKnown RBP9.1□□□□□ -0.95
LSM5-208ENST00000450169 TRABDQ9H4I3 376 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 UBAP1Q9NZ09 502 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 ASIC3Q9UHC3 531 aa9.1□□□□□ -0.95
LSM5-208ENST00000450169 FAM32AQ9Y421 112 aaKnown RBP9.1□□□□□ -0.95
LSM5-208ENST00000450169 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.09□□□□□ -0.95
LSM5-208ENST00000450169 TCRBV7S2A1N4TA0A589 114 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 SMIM22K7EJ46 135 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 TXNDC9O14530 226 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 NDUFB5O43674 189 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 LMNB1P20700 586 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 NFKBIAP25963 317 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 MARCKSL1P49006 195 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 JAM2P57087 298 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 RPL26P61254 145 aaKnown RBP9.09□□□□□ -0.95
LSM5-208ENST00000450169 OVGP1Q12889 678 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 SLC1A5Q15758 541 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 MYLK3Q32MK0 819 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 TMPRSS6Q8IU80 811 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.09□□□□□ -0.95
LSM5-208ENST00000450169 SLC30A5Q8TAD4 765 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 ARHGEF26Q96DR7 871 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 SNF8Q96H20 258 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 ZSWIM1Q9BR11 485 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 TRIM55Q9BYV6 548 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 GRIP2Q9C0E4 1043 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 KLHL4Q9C0H6 718 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 TUT1Q9H6E5 874 aaKnown RBP9.09□□□□□ -0.95
LSM5-208ENST00000450169 TYW1Q9NV66 732 aaKnown RBP9.09□□□□□ -0.95
LSM5-208ENST00000450169 HESX1Q9UBX0 185 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 HDAC9Q9UKV0 1011 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 ALG6Q9Y672 507 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 FRMPD4Q14CM0 1322 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 RREB1Q92766 1687 aa9.09□□□□□ -0.95
LSM5-208ENST00000450169 B2RBV5 119 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 H3BRJ5 948 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 CCNT1O60563 726 aaKnown RBP9.08□□□□□ -0.96
LSM5-208ENST00000450169 TM7SF2O76062 418 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 PDGFRBP09619 1106 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 CPA2P48052 419 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 CDK16Q00536 496 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 PACS1Q6VY07 963 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 LDHAL6AQ6ZMR3 332 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 ULK2Q8IYT8 1036 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 C4orf33Q8N1A6 199 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 MIGA1Q8NAN2 632 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 RIN3Q8TB24 985 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 CASP10Q92851 521 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 MTBPQ96DY7 904 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 SENP6Q9GZR1 1112 aaPredicted RBP9.08□□□□□ -0.96
LSM5-208ENST00000450169 THEGQ9P2T0 379 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 AJAP1Q9UKB5 411 aaPredicted RBP9.08□□□□□ -0.96
LSM5-208ENST00000450169 COG5Q9UP83 839 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 SSX2IPQ9Y2D8 614 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 TSC22D4Q9Y3Q8 395 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 DUOX1Q9NRD9 1551 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 KRT38O76015 456 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 STK10O94804 968 aaKnown RBP9.08□□□□□ -0.96
LSM5-208ENST00000450169 KRT15P19012 456 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 PIK3CAP42336 1068 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 ITGA8P53708 1063 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 PFKPQ01813 784 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 PLCB3Q01970 1234 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 COASYQ13057 564 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 MAPK6Q16659 721 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 LETM2Q2VYF4 491 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 FAM26FQ5R3K3 315 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 LPCAT4Q643R3 524 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 FBXL19Q6PCT2 694 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 AAGABQ6PD74 315 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 LVRNQ6Q4G3 990 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 SLC13A5Q86YT5 568 aaPredicted RBP9.08□□□□□ -0.96
LSM5-208ENST00000450169 SLC25A41Q8N5S1 370 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 SCAIQ8N9R8 606 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 C12orf50Q8NA57 414 aaPredicted RBP9.08□□□□□ -0.96
LSM5-208ENST00000450169 GIPC3Q8TF64 312 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 SLCO2A1Q92959 643 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 CLPTM1LQ96KA5 538 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 MRPS26Q9BYN8 205 aaKnown RBP9.08□□□□□ -0.96
LSM5-208ENST00000450169 THAP2Q9H0W7 228 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 BHMT2Q9H2M3 363 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 ARHGEF4Q9NR80 690 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 SELENONQ9NZV5 590 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 SENP1Q9P0U3 644 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 SLC7A8Q9UHI5 535 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 ZNHIT2Q9UHR6 403 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 LZTS1Q9Y250 596 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 MTO1Q9Y2Z2 717 aaKnown RBP9.08□□□□□ -0.96
LSM5-208ENST00000450169 NEU2Q9Y3R4 380 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 SCN11AQ9UI33 1791 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 MYPNQ86TC9 1320 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 NUP188Q5SRE5 1749 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 ABCA3Q99758 1704 aa9.08□□□□□ -0.96
LSM5-208ENST00000450169 EXOC1LA0A1B0GW35 172 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 ZBED4O75132 1171 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 CA8P35219 290 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 STAT1P42224 750 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 TMED10P49755 219 aaKnown RBP9.07□□□□□ -0.96
LSM5-208ENST00000450169 CAV1Q03135 178 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms