RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 FAM163AQ96GL9 167 aaPredicted RBP10.93□□□□□ -0.66
CTC1-202ENST00000449476 DDX4Q9NQI0 724 aaKnown RBP10.93□□□□□ -0.66
CTC1-202ENST00000449476 A0A0A6YYK5 440 aaPredicted RBP10.93□□□□□ -0.66
CTC1-202ENST00000449476 CCT8L1PA6NM43 557 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 CSPG5O95196 566 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 TAL1P17542 331 aaPredicted RBP10.93□□□□□ -0.66
CTC1-202ENST00000449476 PGM1P36871 562 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 SULT1E1P49888 294 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 AP2B1P63010 937 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 KDSRQ06136 332 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 PTK7Q13308 1070 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 TMEM119Q4V9L6 283 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 KCNK18Q7Z418 384 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 MYCBPAPQ8TBZ2 947 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 SLC20A1Q8WUM9 679 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 ZKSCAN4Q969J2 545 aaPredicted RBP10.93□□□□□ -0.66
CTC1-202ENST00000449476 RANBP17Q9H2T7 1088 aaKnown RBP10.93□□□□□ -0.66
CTC1-202ENST00000449476 ERAP1Q9NZ08 941 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 SLC25A27O95847 323 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 RRM1P23921 792 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 EEF1B2P24534 225 aaKnown RBP10.92□□□□□ -0.66
CTC1-202ENST00000449476 TCF7P36402 384 aaPredicted RBP10.92□□□□□ -0.66
CTC1-202ENST00000449476 CORO7P57737 925 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 TMEM62Q0P6H9 643 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 HABP4Q5JVS0 413 aaKnown RBP10.92□□□□□ -0.66
CTC1-202ENST00000449476 RIBC1Q8N443 379 aaPredicted RBP10.92□□□□□ -0.66
CTC1-202ENST00000449476 TRIML2Q8N7C3 387 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 SERPINB12Q96P63 405 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 SPON2Q9BUD6 331 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 TLR10Q9BXR5 811 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 FAM129AQ9BZQ8 928 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 NDE1Q9NXR1 346 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 MARCOQ9UEW3 520 aaPredicted RBP10.92□□□□□ -0.66
CTC1-202ENST00000449476 HACL1Q9UJ83 578 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 VIRMAQ69YN4 1812 aaKnown RBP10.92□□□□□ -0.66
CTC1-202ENST00000449476 FAM86B1E9PN63 330 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 OGTO15294 1046 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 FAM86B2P0C5J1 330 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 GARTP22102 1010 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 RPS12P25398 132 aaKnown RBP10.92□□□□□ -0.66
CTC1-202ENST00000449476 ZNF507Q8TCN5 953 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 HPDLQ96IR7 371 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 CLMNQ96JQ2 1002 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 METTL5Q9NRN9 209 aaKnown RBP10.92□□□□□ -0.66
CTC1-202ENST00000449476 ORC6Q9Y5N6 252 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 SHPRHQ149N8 1683 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 SMAPO00193 183 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 ZBTB22O15209 634 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 RARGP13631 454 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 GPD1P21695 349 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 ERFP50548 548 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 CDC42EP1Q00587 391 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 NSUN2Q08J23 767 aaKnown RBP eCLIP10.92□□□□□ -0.66
CTC1-202ENST00000449476 STX3Q13277 289 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 MYBPC2Q14324 1141 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 MEA1Q16626 185 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 SV2AQ7L0J3 742 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 SLC26A7Q8TE54 656 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 SLC35C1Q96A29 364 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 MED15Q96RN5 788 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 PLEKHA5Q9HAU0 1116 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 RIMS1Q86UR5 1692 aaKnown RBP10.92□□□□□ -0.66
CTC1-202ENST00000449476 EIF4E1BA6NMX2 242 aaKnown RBP10.92□□□□□ -0.66
CTC1-202ENST00000449476 SPAG6O75602 509 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 MTHFD1LQ6UB35 978 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 CDC26Q8NHZ8 85 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 TMC2Q8TDI7 906 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 AFG1LQ8WV93 481 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 PDCD2LQ9BRP1 358 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 SP110Q9HB58 689 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 INTS13Q9NVM9 706 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 MAP3K20Q9NYL2 800 aaKnown RBP10.92□□□□□ -0.66
CTC1-202ENST00000449476 ADA2Q9NZK5 511 aa10.92□□□□□ -0.66
CTC1-202ENST00000449476 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.92□□□□□ -0.66
CTC1-202ENST00000449476 ZSCAN5CA6NGD5 496 aaPredicted RBP10.91□□□□□ -0.66
CTC1-202ENST00000449476 DFFAO00273 331 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 ZC3H11AO75152 810 aaKnown RBP eCLIP10.91□□□□□ -0.66
CTC1-202ENST00000449476 APOEP02649 317 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 DEUP1Q05D60 604 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 RABGAP1LQ5R372 815 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 LVRNQ6Q4G3 990 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 LCA5Q86VQ0 697 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 C4orf19Q8IY42 314 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 FAM71DQ8N9W8 422 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 EPS8L3Q8TE67 593 aaKnown RBP10.91□□□□□ -0.66
CTC1-202ENST00000449476 SNX2O60749 519 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 HNRNPCL1O60812 293 aaKnown RBP10.91□□□□□ -0.66
CTC1-202ENST00000449476 ITGB3P05106 788 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 ENO1P06733 434 aaKnown RBP10.91□□□□□ -0.66
CTC1-202ENST00000449476 SNRPAP09012 282 aaKnown RBP10.91□□□□□ -0.66
CTC1-202ENST00000449476 ALDH18A1P54886 795 aaKnown RBP10.91□□□□□ -0.66
CTC1-202ENST00000449476 DNAJC3Q13217 504 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.91□□□□□ -0.66
CTC1-202ENST00000449476 SLC47A2Q86VL8 602 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 PPIL6Q8IXY8 311 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 LRRC34Q8IZ02 419 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 SYTL5Q8TDW5 730 aaPredicted RBP10.91□□□□□ -0.66
CTC1-202ENST00000449476 HDAC7Q8WUI4 952 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 TSC22D3Q99576 134 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 TMBIM4Q9HC24 238 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms