RNA–Protein interactions for RNA: ENST00000449421.6

NUP85-202, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-202ENST00000449421 ALG6Q9Y672 507 aa13.41□□□□□ -0.26
NUP85-202ENST00000449421 SCINQ9Y6U3 715 aa13.41□□□□□ -0.26
NUP85-202ENST00000449421 CENPFP49454 3210 aa13.41□□□□□ -0.26
NUP85-202ENST00000449421 CCDC66A2RUB6 948 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 PGRMC1O00264 195 aaKnown RBP13.4□□□□□ -0.26
NUP85-202ENST00000449421 PDE2AO00408 941 aaPredicted RBP13.4□□□□□ -0.26
NUP85-202ENST00000449421 CEP104O60308 925 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 PAEPP09466 180 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 COL6A1P12109 1028 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 SLC1A1P43005 524 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 ZNF132P52740 706 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 MYO1EQ12965 1108 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 KIZQ2M2Z5 673 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 SLC10A6Q3KNW5 377 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 JADE1Q6IE81 842 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 CC2D1AQ6P1N0 951 aaPredicted RBP13.4□□□□□ -0.26
NUP85-202ENST00000449421 CXCL17Q6UXB2 119 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 SESTD1Q86VW0 696 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 PALB2Q86YC2 1186 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 PHF13Q86YI8 300 aaPredicted RBP13.4□□□□□ -0.26
NUP85-202ENST00000449421 EFCAB13Q8IY85 973 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 MCOLN2Q8IZK6 566 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 RASGEF1CQ8N431 466 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 CEP120Q8N960 986 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 SLC43A3Q8NBI5 491 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 NOA1Q8NC60 698 aaKnown RBP13.4□□□□□ -0.26
NUP85-202ENST00000449421 TMEM35BQ8NCS4 154 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 ZNF564Q8TBZ8 553 aaPredicted RBP13.4□□□□□ -0.26
NUP85-202ENST00000449421 ZNF606Q8WXB4 792 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 ABHD8Q96I13 439 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 PPP1R16BQ96T49 567 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.4□□□□□ -0.261e-8■■□□□ 13.5
NUP85-202ENST00000449421 NUP85Q9BW27 656 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 TRIM6Q9C030 488 aaPredicted RBP13.4□□□□□ -0.26
NUP85-202ENST00000449421 CISHQ9NSE2 258 aa13.4□□□□□ -0.26
NUP85-202ENST00000449421 GRIN2DO15399 1336 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 A0A1W2PQ45 241 aaPredicted RBP13.39□□□□□ -0.27
NUP85-202ENST00000449421 A0A1W2PQY0 241 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 CALB1P05937 261 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 ATF7P17544 494 aaPredicted RBP13.39□□□□□ -0.27
NUP85-202ENST00000449421 POLR2BP30876 1174 aaKnown RBP13.39□□□□□ -0.27
NUP85-202ENST00000449421 HOXC8P31273 242 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 TAP1Q03518 808 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 PTPN11Q06124 597 aaPredicted RBP13.39□□□□□ -0.27
NUP85-202ENST00000449421 GPS2Q13227 327 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 C8orf74Q6P047 294 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 UBE2Q1Q7Z7E8 422 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 CDR2LQ86X02 465 aaPredicted RBP13.39□□□□□ -0.27
NUP85-202ENST00000449421 USP38Q8NB14 1042 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 BEST2Q8NFU1 509 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 DNAJB3Q8WWF6 145 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 GLT1D1Q96MS3 346 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 PSMB7Q99436 277 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 ARID3AQ99856 593 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 BCO2Q9BYV7 579 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 XYLT2Q9H1B5 865 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 ACBD3Q9H3P7 528 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 DPP3Q9NY33 737 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 OGFRQ9NZT2 677 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 ADAM22Q9P0K1 906 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 PCDHGC3Q9UN70 934 aa13.39□□□□□ -0.27
NUP85-202ENST00000449421 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.39□□□□□ -0.27
NUP85-202ENST00000449421 GOLGA6L10A0A0M3HER8 536 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 MYO1FO00160 1098 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 CSDE1O75534 798 aaKnown RBP13.38□□□□□ -0.27
NUP85-202ENST00000449421 NPTXRO95502 500 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 CD4P01730 458 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 ITGB3P05106 788 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 NFICP08651 508 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 CTNNA2P26232 953 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 CDK7P50613 346 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 C2orf54Q08AI8 447 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 MESDQ14696 234 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 STILQ15468 1287 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 WDR72Q3MJ13 1102 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 C1orf53Q5VUE5 145 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 NAA35Q5VZE5 725 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 HDXQ7Z353 690 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 DNAAF5Q86Y56 855 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 IFT20Q8IY31 132 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 HACE1Q8IYU2 909 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 C1orf127Q8N9H9 656 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 CCDC26Q8TAB7 109 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.38□□□□□ -0.27
NUP85-202ENST00000449421 CYFIP2Q96F07 1278 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 KIF12Q96FN5 646 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 HPDLQ96IR7 371 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 OSMRQ99650 979 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 CELF4Q9BZC1 486 aaKnown RBP13.38□□□□□ -0.27
NUP85-202ENST00000449421 MIS12Q9H081 205 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 LHX5Q9H2C1 402 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 PARVAQ9NVD7 372 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 NXF1Q9UBU9 619 aaKnown RBP13.38□□□□□ -0.27
NUP85-202ENST00000449421 STRIP2Q9ULQ0 834 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 PACSIN2Q9UNF0 486 aaPredicted RBP13.38□□□□□ -0.27
NUP85-202ENST00000449421 COG5Q9UP83 839 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 AGAP1Q9UPQ3 857 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 GINS2Q9Y248 185 aa13.38□□□□□ -0.27
NUP85-202ENST00000449421 KAT6AQ92794 2004 aa13.37□□□□□ -0.27
NUP85-202ENST00000449421 TLR3O15455 904 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms