RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 ZNF689Q96CS4 500 aaPredicted RBP15.66■□□□□ 0.1
TNF-208ENST00000449264 ZNF830Q96NB3 372 aaPredicted RBP15.66■□□□□ 0.1
TNF-208ENST00000449264 SLC9A7Q96T83 725 aa15.66■□□□□ 0.1
TNF-208ENST00000449264 PDE4DIPQ5VU43 2346 aa15.66■□□□□ 0.1
TNF-208ENST00000449264 NT5C1B-RDH14C9J2C7 533 aa15.65■□□□□ 0.1
TNF-208ENST00000449264 CYB561D2O14569 222 aa15.65■□□□□ 0.1
TNF-208ENST00000449264 NRP1O14786 923 aa15.65■□□□□ 0.1
TNF-208ENST00000449264 HUS1O60921 280 aa15.65■□□□□ 0.1
TNF-208ENST00000449264 ATP2A2P16615 1042 aaKnown RBP15.65■□□□□ 0.1
TNF-208ENST00000449264 ACO1P21399 889 aaKnown RBP15.65■□□□□ 0.1
TNF-208ENST00000449264 YWHAEP62258 255 aaKnown RBP15.65■□□□□ 0.1
TNF-208ENST00000449264 ZNF394Q53GI3 561 aa15.65■□□□□ 0.1
TNF-208ENST00000449264 TDRD12Q587J7 1177 aaKnown RBP15.65■□□□□ 0.1
TNF-208ENST00000449264 CMTR2Q8IYT2 770 aaKnown RBP15.65■□□□□ 0.1
TNF-208ENST00000449264 APPL2Q8NEU8 664 aa15.65■□□□□ 0.1
TNF-208ENST00000449264 SENP8Q96LD8 212 aa15.65■□□□□ 0.1
TNF-208ENST00000449264 MRPL45Q9BRJ2 306 aaKnown RBP15.65■□□□□ 0.1
TNF-208ENST00000449264 GDAP2Q9NXN4 497 aa15.65■□□□□ 0.1
TNF-208ENST00000449264 L1RE1Q9UN81 338 aa15.65■□□□□ 0.1
TNF-208ENST00000449264 CYP26A1O43174 497 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 SKILP12757 684 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 FERP16591 822 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 BCAR1P56945 870 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 ORC1Q13415 861 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 SOWAHAQ2M3V2 549 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 TIGD5Q53EQ6 642 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 WDR59Q6PJI9 974 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 HERC6Q8IVU3 1022 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 FAM71AQ8IYT1 594 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 UBR7Q8N806 425 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 RBBP8NLQ8NC74 664 aaPredicted RBP15.64■□□□□ 0.09
TNF-208ENST00000449264 JAKMIP2Q96AA8 810 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 FAXDC2Q96IV6 333 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 RNPC3Q96LT9 517 aaKnown RBP15.64■□□□□ 0.09
TNF-208ENST00000449264 BAG1Q99933 345 aaPredicted RBP15.64■□□□□ 0.09
TNF-208ENST00000449264 TMEM175Q9BSA9 504 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 KCNF1Q9H3M0 494 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 CWH43Q9H720 699 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 CYP3A43Q9HB55 503 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 AIPL1Q9NZN9 384 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 HMGXB4Q9UGU5 601 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 FAN1Q9Y2M0 1017 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 MRPL42Q9Y6G3 142 aaKnown RBP15.64■□□□□ 0.09
TNF-208ENST00000449264 GBF1Q92538 1859 aa15.64■□□□□ 0.09
TNF-208ENST00000449264 TNRC18O15417 2968 aaPredicted RBP15.64■□□□□ 0.09
TNF-208ENST00000449264 TADA2AO75478 443 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 ALDH2P05091 517 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 GALTP07902 379 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 AARSP49588 968 aaKnown RBP eCLIP15.63■□□□□ 0.09
TNF-208ENST00000449264 KLHL30Q0D2K2 578 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 CD300LGQ6UXG3 332 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 ADGRF2Q8IZF7 708 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 PDCL2Q8N4E4 241 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 SYN2Q92777 582 aaPredicted RBP15.63■□□□□ 0.09
TNF-208ENST00000449264 TRIM44Q96DX7 344 aaPredicted RBP15.63■□□□□ 0.09
TNF-208ENST00000449264 ACP6Q9NPH0 428 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 MARCH5Q9NX47 278 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 TIMM13Q9Y5L4 95 aaPredicted RBP15.63■□□□□ 0.09
TNF-208ENST00000449264 VWA8A3KMH1 1905 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 TMEM189-UBE2V1I3L0A0 370 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 NRDCO43847 1150 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 TLL1O43897 1013 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 CALCAP01258 141 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 PLEKP08567 350 aaPredicted RBP15.63■□□□□ 0.09
TNF-208ENST00000449264 ODC1P11926 461 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 HNRNPH3P31942 346 aaKnown RBP15.63■□□□□ 0.09
TNF-208ENST00000449264 ALDH7A1P49419 539 aaKnown RBP15.63■□□□□ 0.09
TNF-208ENST00000449264 NDST1P52848 882 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 MEA1Q16626 185 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 WSCD1Q658N2 575 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 SLC47A2Q86VL8 602 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 TMEM173Q86WV6 379 aaPredicted RBP15.63■□□□□ 0.09
TNF-208ENST00000449264 FMNL3Q8IVF7 1028 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 TOP6BLQ8N6T0 577 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 CCDC112Q8NEF3 446 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 OR6B3Q8NGW1 331 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 KBTBD7Q8WVZ9 684 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 CHP1Q99653 195 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 COLEC11Q9BWP8 271 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 ADAM28Q9UKQ2 775 aa15.63■□□□□ 0.09
TNF-208ENST00000449264 NLRC5Q86WI3 1866 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 SOWAHDA6NJG2 315 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 H0YGN5 161 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 HCRTO43612 131 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 CILPO75339 1184 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 CAPN15O75808 1086 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 SERPING1P05155 500 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 CCDC172P0C7W6 258 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 CLCN1P35523 988 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 PDE6CP51160 858 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 HTRA4P83105 476 aaPredicted RBP15.62■□□□□ 0.09
TNF-208ENST00000449264 CCZ1BP86790 482 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 CCZ1P86791 482 aaPredicted RBP15.62■□□□□ 0.09
TNF-208ENST00000449264 INCA1Q0VD86 236 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 SHHQ15465 462 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 HGSNATQ68CP4 663 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 CYP26C1Q6V0L0 522 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 IRF2BP2Q7Z5L9 587 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 TMEM139Q8IV31 216 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 PHOSPHO2Q8TCD6 241 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms