RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 C3orf62Q6ZUJ4 267 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 RAB44Q7Z6P3 723 aaPredicted RBP7.52□□□□□ -1.21
BEST1-202ENST00000449131 SCN4BQ8IWT1 228 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 UBA3Q8TBC4 463 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 SPATA18Q8TC71 538 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 SYTL5Q8TDW5 730 aaPredicted RBP7.52□□□□□ -1.21
BEST1-202ENST00000449131 EXT2Q93063 718 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 CAVIN3Q969G5 261 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 ATP6V1E2Q96A05 226 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 SGSM3Q96HU1 749 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 FAM161BQ96MY7 647 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 SIK2Q9H0K1 926 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 SMARCAD1Q9H4L7 1026 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 FAM49BQ9NUQ9 324 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 RNF181Q9P0P0 153 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 SMG5Q9UPR3 1016 aaKnown RBP7.52□□□□□ -1.21
BEST1-202ENST00000449131 A0A0A6YYK5 440 aaPredicted RBP7.52□□□□□ -1.21
BEST1-202ENST00000449131 ASB14A6NK59 587 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 ZNF263O14978 683 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 PJA2O43164 708 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 CALCAP01258 141 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 PDGFRBP09619 1106 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 RFC5P40937 340 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 RARRES1P49788 294 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 KCNV1Q6PIU1 500 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 LONP2Q86WA8 852 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 RDM1Q8NG50 284 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 TNFRSF25Q93038 417 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 DNAJC19Q96DA6 116 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 ATXN7L3BQ96GX2 97 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 PDCD2LQ9BRP1 358 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 SEMA4AQ9H3S1 761 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 NPHS2Q9NP85 383 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 STOML1Q9UBI4 398 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 XPO7Q9UIA9 1087 aaKnown RBP7.52□□□□□ -1.21
BEST1-202ENST00000449131 HACL1Q9UJ83 578 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 SALL4Q9UJQ4 1053 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 USP20Q9Y2K6 914 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 MX2P20592 715 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 SLC12A3P55017 1021 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 COPS2P61201 443 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 IFI35P80217 286 aaPredicted RBP7.52□□□□□ -1.21
BEST1-202ENST00000449131 TMEM132DQ14C87 1099 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 IER5Q5VY09 327 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 CYB5D1Q6P9G0 228 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 CCNYL1Q8N7R7 359 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 SKA2Q8WVK7 121 aaPredicted RBP7.52□□□□□ -1.21
BEST1-202ENST00000449131 TATDN2Q93075 761 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 ERP27Q96DN0 273 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 VPS39Q96JC1 886 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 AGAP3Q96P47 875 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 TTC1Q99614 292 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 MMTAG2Q9BU76 263 aaKnown RBP7.52□□□□□ -1.21
BEST1-202ENST00000449131 PSMC3IPQ9P2W1 217 aaPredicted RBP7.52□□□□□ -1.21
BEST1-202ENST00000449131 EPS15L1Q9UBC2 864 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 ZC3H7BQ9UGR2 993 aaKnown RBP7.52□□□□□ -1.21
BEST1-202ENST00000449131 GOLGA8QA0A0J9YX86 632 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 GOLGA8OA6NCC3 632 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 GOLGA8NF8WBI6 632 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 TRPA1O75762 1119 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 PIAS1O75925 651 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 RAD23BP54727 409 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 AMPD2Q01433 879 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 CENPCQ03188 943 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 TMEM62Q0P6H9 643 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 KCNMA1Q12791 1236 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 SLC12A1Q13621 1099 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 LRRC36Q1X8D7 754 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 EFHC2Q5JST6 749 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 C1orf146Q5VVC0 180 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 EFCAB12Q6NXP0 572 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 ARHGEF26Q96DR7 871 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 FOXP3Q9BZS1 431 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 GAKO14976 1311 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 ATP9BO43861 1147 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 RARGP13631 454 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 CASP2P42575 452 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 DNAJC3Q13217 504 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 ORC1Q13415 861 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 MAP7Q14244 749 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 SLC51AQ86UW1 340 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 ARHGEF19Q8IW93 802 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 C4orf19Q8IY42 314 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 C4orf32Q8N8J7 132 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 AGR3Q8TD06 166 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 FAM84AQ96KN4 292 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 TRIM56Q9BRZ2 755 aaKnown RBP7.51□□□□□ -1.21
BEST1-202ENST00000449131 CYP4F11Q9HBI6 524 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 AGO4Q9HCK5 861 aaKnown RBP7.51□□□□□ -1.21
BEST1-202ENST00000449131 ZFATQ9P243 1243 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 ATRNO75882 1429 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 RGPD1P0DJD0 1748 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 TISP43B9A030 160 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 OPLAHO14841 1288 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 NKRFO15226 690 aaKnown RBP eCLIP7.51□□□□□ -1.21
BEST1-202ENST00000449131 ZWINTO95229 277 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 LMNAP02545 664 aaKnown RBP7.51□□□□□ -1.21
BEST1-202ENST00000449131 PMLP29590 882 aa7.51□□□□□ -1.21
BEST1-202ENST00000449131 HOXA10P31260 410 aaPredicted RBP7.51□□□□□ -1.21
BEST1-202ENST00000449131 ELF1P32519 619 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms