RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 KINO60870 393 aaKnown RBP15.75■□□□□ 0.11
USP39-206ENST00000448971 KIF20AO95235 890 aa15.75■□□□□ 0.11
USP39-206ENST00000448971 PAPLNO95428 1278 aa15.75■□□□□ 0.11
USP39-206ENST00000448971 FGFR3P22607 806 aa15.75■□□□□ 0.11
USP39-206ENST00000448971 HOXD13P35453 343 aa15.75■□□□□ 0.11
USP39-206ENST00000448971 TFAMQ00059 246 aaKnown RBP15.75■□□□□ 0.11
USP39-206ENST00000448971 PNOCQ13519 176 aa15.75■□□□□ 0.11
USP39-206ENST00000448971 ZBTB6Q15916 424 aa15.75■□□□□ 0.11
USP39-206ENST00000448971 CD300LGQ6UXG3 332 aa15.75■□□□□ 0.11
USP39-206ENST00000448971 ANKS3Q6ZW76 656 aa15.75■□□□□ 0.11
USP39-206ENST00000448971 PALB2Q86YC2 1186 aa15.75■□□□□ 0.11
USP39-206ENST00000448971 NT5DC4Q86YG4 428 aa15.75■□□□□ 0.11
USP39-206ENST00000448971 CBWD2Q8IUF1 395 aa15.75■□□□□ 0.11
USP39-206ENST00000448971 RSAD2Q8WXG1 361 aa15.75■□□□□ 0.11
USP39-206ENST00000448971 WDR6Q9NNW5 1121 aaKnown RBP15.75■□□□□ 0.11
USP39-206ENST00000448971 WNT16Q9UBV4 365 aa15.75■□□□□ 0.11
USP39-206ENST00000448971 DPP7Q9UHL4 492 aa15.75■□□□□ 0.11
USP39-206ENST00000448971 HOOK1Q9UJC3 728 aaKnown RBP15.75■□□□□ 0.11
USP39-206ENST00000448971 CEP250Q9BV73 2442 aa15.75■□□□□ 0.11
USP39-206ENST00000448971 MTCL1Q9Y4B5 1905 aaKnown RBP15.74■□□□□ 0.11
USP39-206ENST00000448971 KRBA1A5PL33 1030 aa15.74■□□□□ 0.11
USP39-206ENST00000448971 ZNF233A6NK53 670 aa15.74■□□□□ 0.11
USP39-206ENST00000448971 PPEF2O14830 753 aa15.74■□□□□ 0.11
USP39-206ENST00000448971 SYN3O14994 580 aa15.74■□□□□ 0.11
USP39-206ENST00000448971 RHOBTB3O94955 611 aa15.74■□□□□ 0.11
USP39-206ENST00000448971 TMEM191BP0C7N4 346 aa15.74■□□□□ 0.11
USP39-206ENST00000448971 WNT7BP56706 349 aa15.74■□□□□ 0.11
USP39-206ENST00000448971 SNRPFP62306 86 aaKnown RBP15.74■□□□□ 0.11
USP39-206ENST00000448971 VARS2Q5ST30 1063 aaKnown RBP15.74■□□□□ 0.11
USP39-206ENST00000448971 ZNF280DQ6N043 979 aa15.74■□□□□ 0.11
USP39-206ENST00000448971 CYP26C1Q6V0L0 522 aa15.74■□□□□ 0.11
USP39-206ENST00000448971 DSTYKQ6XUX3 929 aa15.74■□□□□ 0.11
USP39-206ENST00000448971 ERMP1Q7Z2K6 904 aa15.74■□□□□ 0.11
USP39-206ENST00000448971 SLC44A3Q8N4M1 653 aa15.74■□□□□ 0.11
USP39-206ENST00000448971 GOLGA5Q8TBA6 731 aa15.74■□□□□ 0.11
USP39-206ENST00000448971 LNX1Q8TBB1 728 aaPredicted RBP15.74■□□□□ 0.11
USP39-206ENST00000448971 SUSD3Q96L08 255 aa15.74■□□□□ 0.11
USP39-206ENST00000448971 ZNF560Q96MR9 790 aa15.74■□□□□ 0.11
USP39-206ENST00000448971 KIAA1586Q9HCI6 787 aa15.74■□□□□ 0.11
USP39-206ENST00000448971 CGNQ9P2M7 1197 aaKnown RBP15.74■□□□□ 0.11
USP39-206ENST00000448971 MTRRQ9UBK8 725 aa15.74■□□□□ 0.11
USP39-206ENST00000448971 FBXL21Q9UKT6 434 aa15.74■□□□□ 0.11
USP39-206ENST00000448971 ANK1P16157 1881 aa15.74■□□□□ 0.11
USP39-206ENST00000448971 VWA8A3KMH1 1905 aa15.73■□□□□ 0.11
USP39-206ENST00000448971 TGM5O43548 720 aa15.73■□□□□ 0.11
USP39-206ENST00000448971 ID4P47928 161 aa15.73■□□□□ 0.11
USP39-206ENST00000448971 SNW1Q13573 536 aaKnown RBP15.73■□□□□ 0.11
USP39-206ENST00000448971 KCNB1Q14721 858 aa15.73■□□□□ 0.11
USP39-206ENST00000448971 SNRNP35Q16560 246 aaKnown RBP15.73■□□□□ 0.11
USP39-206ENST00000448971 LIN9Q5TKA1 542 aa15.73■□□□□ 0.11
USP39-206ENST00000448971 C9orf57Q5W0N0 161 aa15.73■□□□□ 0.11
USP39-206ENST00000448971 LMBRD2Q68DH5 695 aaPredicted RBP15.73■□□□□ 0.11
USP39-206ENST00000448971 XXYLT1Q8NBI6 393 aa15.73■□□□□ 0.11
USP39-206ENST00000448971 RDH13Q8NBN7 331 aa15.73■□□□□ 0.11
USP39-206ENST00000448971 APPL2Q8NEU8 664 aa15.73■□□□□ 0.11
USP39-206ENST00000448971 ENGASEQ8NFI3 743 aa15.73■□□□□ 0.11
USP39-206ENST00000448971 ZNF707Q96C28 371 aaPredicted RBP15.73■□□□□ 0.11
USP39-206ENST00000448971 MYADMQ96S97 322 aa15.73■□□□□ 0.11
USP39-206ENST00000448971 MTMR12Q9C0I1 747 aa15.73■□□□□ 0.11
USP39-206ENST00000448971 PDE11AQ9HCR9 933 aa15.73■□□□□ 0.11
USP39-206ENST00000448971 RMND1Q9NWS8 449 aa15.73■□□□□ 0.11
USP39-206ENST00000448971 DPP3Q9NY33 737 aa15.73■□□□□ 0.11
USP39-206ENST00000448971 EPS15L1Q9UBC2 864 aa15.73■□□□□ 0.11
USP39-206ENST00000448971 PCDHB8Q9UN66 801 aa15.73■□□□□ 0.11
USP39-206ENST00000448971 CDY1Q9Y6F8 540 aa15.73■□□□□ 0.11
USP39-206ENST00000448971 GPR179Q6PRD1 2367 aa15.73■□□□□ 0.11
USP39-206ENST00000448971 H7C4K7 107 aa15.72■□□□□ 0.11
USP39-206ENST00000448971 EXOC3O60645 756 aa15.72■□□□□ 0.11
USP39-206ENST00000448971 GADD45BO75293 160 aaPredicted RBP15.72■□□□□ 0.11
USP39-206ENST00000448971 RFPL2O75678 378 aa15.72■□□□□ 0.11
USP39-206ENST00000448971 SMC2O95347 1197 aa15.72■□□□□ 0.11
USP39-206ENST00000448971 CFHP08603 1231 aa15.72■□□□□ 0.11
USP39-206ENST00000448971 KRT19P08727 400 aa15.72■□□□□ 0.11
USP39-206ENST00000448971 SPATA31D3P0C874 917 aa15.72■□□□□ 0.11
USP39-206ENST00000448971 ODC1P11926 461 aa15.72■□□□□ 0.11
USP39-206ENST00000448971 TAF6P49848 677 aa15.72■□□□□ 0.11
USP39-206ENST00000448971 ARPP19P56211 112 aa15.72■□□□□ 0.11
USP39-206ENST00000448971 SURF1Q15526 300 aa15.72■□□□□ 0.11
USP39-206ENST00000448971 CTXN3Q4LDR2 81 aa15.72■□□□□ 0.11
USP39-206ENST00000448971 SPATA31D4Q6ZUB0 917 aa15.72■□□□□ 0.11
USP39-206ENST00000448971 USP37Q86T82 979 aa15.72■□□□□ 0.11
USP39-206ENST00000448971 CACTINQ8WUQ7 758 aaKnown RBP15.72■□□□□ 0.11
USP39-206ENST00000448971 SMARCE1Q969G3 411 aa15.72■□□□□ 0.11
USP39-206ENST00000448971 ANKRD36BP1Q96IX9 119 aa15.72■□□□□ 0.11
USP39-206ENST00000448971 TIGD1Q96MW7 591 aa15.72■□□□□ 0.11
USP39-206ENST00000448971 FNBP1Q96RU3 617 aa15.72■□□□□ 0.11
USP39-206ENST00000448971 CLSTN3Q9BQT9 956 aa15.72■□□□□ 0.11
USP39-206ENST00000448971 MAPK8IP1Q9UQF2 711 aa15.72■□□□□ 0.11
USP39-206ENST00000448971 R3HCC1Q9Y3T6 440 aaKnown RBP15.72■□□□□ 0.11
USP39-206ENST00000448971 ARHGEF37A1IGU5 675 aa15.71■□□□□ 0.11
USP39-206ENST00000448971 CALUO43852 315 aaPredicted RBP15.71■□□□□ 0.11
USP39-206ENST00000448971 C1RP00736 705 aa15.71■□□□□ 0.11
USP39-206ENST00000448971 TNNC2P02585 160 aa15.71■□□□□ 0.11
USP39-206ENST00000448971 ITGB3P05106 788 aa15.71■□□□□ 0.11
USP39-206ENST00000448971 DLATP10515 647 aaKnown RBP15.71■□□□□ 0.11
USP39-206ENST00000448971 POLR2BP30876 1174 aaKnown RBP15.71■□□□□ 0.11
USP39-206ENST00000448971 OR1D2P34982 312 aa15.71■□□□□ 0.11
USP39-206ENST00000448971 YWHAHQ04917 246 aaPredicted RBP15.71■□□□□ 0.11
USP39-206ENST00000448971 SV2CQ496J9 727 aa15.71■□□□□ 0.11
USP39-206ENST00000448971 C12orf56Q8IXR9 622 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms