RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 KPNA7A9QM74 516 aa13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 XYLBO75191 536 aa13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 VNN2O95498 520 aa13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 CYP11A1P05108 521 aa13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 POU2F2P09086 479 aa13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 CPB1P15086 417 aa13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 FSHRP23945 695 aa13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 DPYDQ12882 1025 aa13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 SURF1Q15526 300 aa13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 SNRNP35Q16560 246 aaKnown RBP13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 SV2CQ496J9 727 aa13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 LMBRD2Q68DH5 695 aaPredicted RBP13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 TRIM67Q6ZTA4 783 aa13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 XXYLT1Q8NBI6 393 aa13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 OR5B17Q8NGF7 314 aa13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 MTMR12Q9C0I1 747 aa13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 SMOC2Q9H3U7 446 aa13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 CGNQ9P2M7 1197 aaKnown RBP13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 AFF4Q9UHB7 1163 aaKnown RBP13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 MAFFQ9ULX9 164 aa13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 SORCS3Q9UPU3 1222 aa13.75□□□□□ -0.21
PRPF40A-203ENST00000448428 LRG1P02750 347 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 TMEM191BP0C7N4 346 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 LAMP2P13473 410 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 COL9A1P20849 921 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 PNPLA4P41247 253 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 RBP5P82980 135 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 GPR17Q13304 367 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 MYBPC2Q14324 1141 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 WSCD1Q658N2 575 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 GET4Q7L5D6 327 aaPredicted RBP13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 C12orf56Q8IXR9 622 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 FMR1NBQ8N0W7 255 aaPredicted RBP13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 OR10T2Q8NGX3 314 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 ZNF560Q96MR9 790 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 PGLYRP2Q96PD5 576 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 TMEM209Q96SK2 561 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 RTP3Q9BQQ7 232 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 KCTD10Q9H3F6 313 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 KCNK12Q9HB15 430 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 EPS15L1Q9UBC2 864 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 SIX4Q9UIU6 781 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 ITGA11Q9UKX5 1188 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 DSEQ9UL01 958 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 INSL5Q9Y5Q6 135 aa13.74□□□□□ -0.21
PRPF40A-203ENST00000448428 GOLGA6L4A6NEF3 574 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 TMEM221A6NGB7 291 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 M0R296 226 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 RHOBTB3O94955 611 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 KRT19P08727 400 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 PTPN2P17706 415 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 CYP24A1Q07973 514 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 SIGLEC14Q08ET2 396 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 BFSP1Q12934 665 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 SNW1Q13573 536 aaKnown RBP13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 MTMR3Q13615 1198 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 PSMD6Q15008 389 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 DUOXA2Q1HG44 320 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 HFE2Q6ZVN8 426 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 METTL23Q86XA0 190 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 WDR49Q8IV35 697 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 UBALD2Q8IYN6 164 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 LRRC52Q8N7C0 313 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 ENGASEQ8NFI3 743 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 ITFG1Q8TB96 612 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 RSAD2Q8WXG1 361 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 ZNF516Q92618 1163 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 ANKRD36BP1Q96IX9 119 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 MFSD14AQ96MC6 490 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 CRISPLD1Q9H336 500 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 IGSF9Q9P2J2 1179 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 RAPGEFL1Q9UHV5 662 aa13.73□□□□□ -0.21
PRPF40A-203ENST00000448428 PDXKO00764 312 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 EXOC3O60645 756 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 TNNC2P02585 160 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 RHOP08100 348 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 DLATP10515 647 aaKnown RBP13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 CDR1P51861 262 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 TWF1Q12792 350 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 DUSP4Q13115 394 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 PABPC1LQ4VXU2 614 aaKnown RBP13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 CENPPQ6IPU0 288 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 TRAPPC11Q7Z392 1133 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 LRRTM3Q86VH5 581 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 THEM5Q8N1Q8 247 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 ATAD1Q8NBU5 361 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 ST13P5Q8NFI4 369 aaPredicted RBP13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 GOLGA5Q8TBA6 731 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 FGF13Q92913 245 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 CCDC47Q96A33 483 aaKnown RBP13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 CCDC127Q96BQ5 260 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 ASIC4Q96FT7 647 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 ZCWPW1Q9H0M4 648 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 GZF1Q9H116 711 aaPredicted RBP13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 DMAC2Q9NW81 257 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 GDAP2Q9NXN4 497 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 CEP72Q9P209 647 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 CDH7Q9ULB5 785 aa13.72□□□□□ -0.21
PRPF40A-203ENST00000448428 SLC27A5Q9Y2P5 690 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms