RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 TMEM189-UBE2V1I3L0A0 370 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 TNFRSF10AO00220 468 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 CST3P01034 146 aaPredicted RBP12.45□□□□□ -0.42
LINC00408-201ENST00000447784 HLA-DRAP01903 254 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 ZNF18P17022 549 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 GTF2F1P35269 517 aaKnown RBP eCLIP12.45□□□□□ -0.42
LINC00408-201ENST00000447784 MYL6P60660 151 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 TNNC1P63316 161 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 SMC1AQ14683 1233 aaKnown RBP12.45□□□□□ -0.42
LINC00408-201ENST00000447784 ZNF699Q32M78 642 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 CBWD6Q4V339 395 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 CBWD3Q5JTY5 395 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 CBWD5Q5RIA9 395 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 PTCRAQ6ISU1 281 aaPredicted RBP12.45□□□□□ -0.42
LINC00408-201ENST00000447784 TMEM184AQ6ZMB5 413 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 EP400NLQ6ZTU2 488 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 RBM23Q86U06 439 aaKnown RBP12.45□□□□□ -0.42
LINC00408-201ENST00000447784 TMEM173Q86WV6 379 aaPredicted RBP12.45□□□□□ -0.42
LINC00408-201ENST00000447784 METTL23Q86XA0 190 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 CEP57Q86XR8 500 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 TAS1R2Q8TE23 839 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 MSLNLQ96KJ4 702 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 RAB20Q9NX57 234 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 SIX4Q9UIU6 781 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 PCDHGC5Q9Y5F6 944 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 IRAK3Q9Y616 596 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 NLRC5Q86WI3 1866 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 PPEF2O14830 753 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 PMM2O15305 246 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 LINC01565O15544 149 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 HUS1O60921 280 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 TBX10O75333 385 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 TPM3P06753 285 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 CTSAP10619 480 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 ATP1A3P13637 1013 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 CA8P35219 290 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 NDUFV1P49821 464 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 COPB1P53618 953 aaKnown RBP12.44□□□□□ -0.42
LINC00408-201ENST00000447784 LILRA4P59901 499 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 DLX2Q07687 328 aaPredicted RBP12.44□□□□□ -0.42
LINC00408-201ENST00000447784 KCNC3Q14003 757 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 WDR72Q3MJ13 1102 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 ZNF667Q5HYK9 610 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 FAM171A1Q5VUB5 890 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 PLPP4Q5VZY2 271 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 FUT10Q6P4F1 479 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 GBP6Q6ZN66 633 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 C15orf39Q6ZRI6 1047 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 VPS52Q8N1B4 723 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 APPL2Q8NEU8 664 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 BCL7CQ8WUZ0 217 aaPredicted RBP12.44□□□□□ -0.42
LINC00408-201ENST00000447784 PCMTD1Q96MG8 357 aaPredicted RBP12.44□□□□□ -0.42
LINC00408-201ENST00000447784 MMS19Q96T76 1030 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 ZBP1Q9H171 429 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 MARCH5Q9NX47 278 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 NXF1Q9UBU9 619 aaKnown RBP12.44□□□□□ -0.42
LINC00408-201ENST00000447784 DSEQ9UL01 958 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 SSX2IPQ9Y2D8 614 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 SNX9Q9Y5X1 595 aa12.44□□□□□ -0.42
LINC00408-201ENST00000447784 C2orf71A6NGG8 1288 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 LRRC10BA6NIK2 292 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 HIDE1A8MVS5 230 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 F8W810 466 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 CYB561D2O14569 222 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 PER2O15055 1255 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 CXCL14O95715 111 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 STAU1O95793 577 aaKnown RBP12.43□□□□□ -0.42
LINC00408-201ENST00000447784 GLP2RO95838 553 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 URODP06132 367 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 ODC1P11926 461 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 BRCC3P46736 316 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 PLCB2Q00722 1185 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 UBXN1Q04323 297 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 USP41Q3LFD5 358 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 PDXDC1Q6P996 788 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 EHBP1Q8NDI1 1231 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 C3orf58Q8NDZ4 430 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 SUSD3Q96L08 255 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 SENP8Q96LD8 212 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 DNAI2Q9GZS0 605 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 HSD3B7Q9H2F3 369 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 GCNT4Q9P109 453 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 CLEC1BQ9P126 229 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 PRKAG3Q9UGI9 489 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 CD207Q9UJ71 328 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 PCDHB8Q9UN66 801 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 COQ4Q9Y3A0 265 aa12.43□□□□□ -0.42
LINC00408-201ENST00000447784 VCANP13611 3396 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 GTPBP10A4D1E9 387 aaKnown RBP12.42□□□□□ -0.42
LINC00408-201ENST00000447784 LGALS16A8MUM7 142 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 I3L4J1 428 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 SYN3O14994 580 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 SPTLC1O15269 473 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 CBFA2T2O43439 604 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 MBTPS2O43462 519 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 VNN1O95497 513 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 EFEMP2O95967 443 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 ASS1P00966 412 aaKnown RBP12.42□□□□□ -0.42
LINC00408-201ENST00000447784 SOD2P04179 222 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 SRGAP2BP0DMP2 458 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms