RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	C9orf78	Q9NZ63	289 aa	Predicted RBP	7.15	□□□□□ -1.27
TRIM6-205	ENST00000445329	ARHGAP26	Q9UNA1	814 aa		7.15	□□□□□ -1.27
TRIM6-205	ENST00000445329	RPH3A	Q9Y2J0	694 aa	Predicted RBP	7.15	□□□□□ -1.27
TRIM6-205	ENST00000445329	PCM1	Q15154	2024 aa		7.15	□□□□□ -1.27
TRIM6-205	ENST00000445329	LINC01387	J3KSC0	135 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	ZBTB7B	O15156	539 aa	Predicted RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	ZC3H11A	O75152	810 aa	Known RBP eCLIP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	BAG2	O95816	211 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	NPPA	P01160	153 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	DBT	P11182	482 aa	Known RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	ZNF12	P17014	697 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	RXRB	P28702	533 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	NUBP1	P53384	320 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	GNG2	P59768	71 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	EIF4A1	P60842	406 aa	Known RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	REL	Q04864	619 aa	Predicted RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	FAM205BP	Q63HN1	556 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	MMGT1	Q8N4V1	131 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	DTX3L	Q8TDB6	740 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	GTF3C2	Q8WUA4	911 aa	Predicted RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	CASKIN2	Q8WXE0	1202 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	SPOCK2	Q92563	424 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	CEP170P1	Q96L14	293 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	C17orf80	Q9BSJ5	609 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	KATNAL1	Q9BW62	490 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	DENND2D	Q9H6A0	471 aa	Predicted RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	SLC38A10	Q9HBR0	1119 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	S100A14	Q9HCY8	104 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	SDHAF3	Q9NRP4	125 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	GIMAP4	Q9NUV9	329 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	INTS9	Q9NV88	658 aa	Known RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	DDX43	Q9NXZ2	648 aa	Known RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	SENP1	Q9P0U3	644 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	FNIP2	Q9P278	1114 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	PRKAG3	Q9UGI9	489 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	PRKAG2	Q9UGJ0	569 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	RABGEF1	Q9UJ41	708 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	USP15	Q9Y4E8	981 aa	Predicted RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	PCDHB13	Q9Y5F0	798 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	HEMK1	Q9Y5R4	338 aa	Predicted RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	PRR23A	A6NEV1	266 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	NCAM2	O15394	837 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	CLOCK	O15516	846 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	ZNF862	O60290	1169 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	DNAJB5	O75953	348 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	SUN1	O94901	812 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	PIGN	O95427	931 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	KRT5	P13647	590 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	CCNB1	P14635	433 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	ATF4	P18848	351 aa	Predicted RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	GNL1	P36915	607 aa	Predicted RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	SLC34A1	Q06495	639 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	SQLE	Q14534	574 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	KCNT1	Q5JUK3	1230 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	HAUS3	Q68CZ6	603 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	IZUMO2	Q6UXV1	221 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	ADSSL1	Q8N142	457 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	AGGF1	Q8N302	714 aa	eCLIP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	CCDC138	Q96M89	665 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	SELENOS	Q9BQE4	189 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	ZNF717	Q9BY31	904 aa	Predicted RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	CNOT10	Q9H9A5	744 aa	Known RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	PPCS	Q9HAB8	311 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	CYP26B1	Q9NR63	512 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	TXLNG	Q9NUQ3	528 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	STMN3	Q9NZ72	180 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	STRIP2	Q9ULQ0	834 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	PCDHA12	Q9UN75	941 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	MAGED1	Q9Y5V3	778 aa	Predicted RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	FADS2P1	A8MWK0	482 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	DCDC2C	A8MYV0	355 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	TAF4	O00268	1085 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	RTCA	O00442	366 aa	Known RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	ALOX15B	O15296	676 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	GREM1	O60565	184 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	UNC5C	O95185	931 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	DDX58	O95786	925 aa	Known RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	LRPAP1	P30533	357 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	PRKAR1B	P31321	381 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	CARS	P49589	748 aa	Known RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	ARHGDIA	P52565	204 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	HNRNPF	P52597	415 aa	Known RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	IFITM2	Q01629	132 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	PLCB3	Q01970	1234 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	NFX1	Q12986	1120 aa	Known RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	TWISTNB	Q3B726	338 aa	Predicted RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	ADCK5	Q3MIX3	580 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	KHDC1	Q4VXA5	237 aa	Known RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	TRAPPC3L	Q5T215	181 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	C8orf74	Q6P047	294 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	ZNF790	Q6PG37	636 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	CATSPER4	Q7RTX7	472 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	ATG9A	Q7Z3C6	839 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	CYP2U1	Q7Z449	544 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	NOSTRIN	Q8IVI9	506 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	FITM2	Q8N6M3	262 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	TTC13	Q8NBP0	860 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	ENGASE	Q8NFI3	743 aa		7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	TMA16	Q96EY4	203 aa	Known RBP	7.14	□□□□□ -1.27
TRIM6-205	ENST00000445329	CEP95	Q96GE4	821 aa		7.14	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms