RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 LRIT3Q3SXY7 679 aa9.4□□□□□ -0.9
FXR1-203ENST00000445140 ZNF667Q5HYK9 610 aa9.4□□□□□ -0.9
FXR1-203ENST00000445140 DDX53Q86TM3 631 aaKnown RBP9.4□□□□□ -0.9
FXR1-203ENST00000445140 NEK11Q8NG66 645 aa9.4□□□□□ -0.9
FXR1-203ENST00000445140 C18orf25Q96B23 403 aaPredicted RBP9.4□□□□□ -0.9
FXR1-203ENST00000445140 ZNF558Q96NG5 402 aa9.4□□□□□ -0.9
FXR1-203ENST00000445140 POP1Q99575 1024 aaKnown RBP9.4□□□□□ -0.9
FXR1-203ENST00000445140 CXCL16Q9H2A7 254 aa9.4□□□□□ -0.9
FXR1-203ENST00000445140 BACE2Q9Y5Z0 518 aa9.4□□□□□ -0.9
FXR1-203ENST00000445140 IRAK3Q9Y616 596 aa9.4□□□□□ -0.9
FXR1-203ENST00000445140 SF3B1O75533 1304 aaKnown RBP eCLIP9.4□□□□□ -0.97e-6■■■■■ 29.8
FXR1-203ENST00000445140 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.4□□□□□ -0.9
FXR1-203ENST00000445140 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.4□□□□□ -0.9
FXR1-203ENST00000445140 TBKBP1A7MCY6 615 aa9.4□□□□□ -0.9
FXR1-203ENST00000445140 PLXNA3P51805 1871 aa9.4□□□□□ -0.9
FXR1-203ENST00000445140 PPP1R2P3Q6NXS1 205 aa9.4□□□□□ -0.9
FXR1-203ENST00000445140 ZNF677Q86XU0 584 aa9.4□□□□□ -0.9
FXR1-203ENST00000445140 FAM71AQ8IYT1 594 aa9.4□□□□□ -0.9
FXR1-203ENST00000445140 ANP32BQ92688 251 aaKnown RBP9.4□□□□□ -0.9
FXR1-203ENST00000445140 PANX2Q96RD6 677 aa9.4□□□□□ -0.9
FXR1-203ENST00000445140 TRIM5Q9C035 493 aa9.4□□□□□ -0.9
FXR1-203ENST00000445140 GPR88Q9GZN0 384 aa9.4□□□□□ -0.9
FXR1-203ENST00000445140 APOBEC3GQ9HC16 384 aaKnown RBP9.4□□□□□ -0.9
FXR1-203ENST00000445140 CHST7Q9NS84 486 aa9.4□□□□□ -0.9
FXR1-203ENST00000445140 CXXC1Q9P0U4 656 aaPredicted RBP9.4□□□□□ -0.9
FXR1-203ENST00000445140 MTCL1Q9Y4B5 1905 aaKnown RBP9.4□□□□□ -0.91
FXR1-203ENST00000445140 KPNA7A9QM74 516 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 H0YGN5 161 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 FSCN2O14926 492 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 B4GALT3O60512 393 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 CST3P01034 146 aaPredicted RBP9.39□□□□□ -0.91
FXR1-203ENST00000445140 POU2F2P09086 479 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 CCDC172P0C7W6 258 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 ODC1P11926 461 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 LHX1P48742 406 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 SLC11A1P49279 550 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 MYL6P60660 151 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 BIRC3Q13489 604 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 STILQ15468 1287 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 PHLDB3Q6NSJ2 640 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 GPR153Q6NV75 609 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 CNGA4Q8IV77 575 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 TDHQ8IZJ6 230 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 CRYBG2Q8N1P7 616 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 FIBCD1Q8N539 461 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 C2orf15Q8WU43 125 aaKnown RBP9.39□□□□□ -0.91
FXR1-203ENST00000445140 RNPC3Q96LT9 517 aaKnown RBP9.39□□□□□ -0.91
FXR1-203ENST00000445140 FAM193BQ96PV7 902 aaPredicted RBP9.39□□□□□ -0.91
FXR1-203ENST00000445140 SYT11Q9BT88 431 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 APOL6Q9BWW8 343 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 LSM14BQ9BX40 385 aaKnown RBP9.39□□□□□ -0.91
FXR1-203ENST00000445140 KLK14Q9P0G3 267 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 ADAM28Q9UKQ2 775 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 AGAP1Q9UPQ3 857 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 BZW2Q9Y6E2 419 aaKnown RBP9.39□□□□□ -0.91
FXR1-203ENST00000445140 MRPL42Q9Y6G3 142 aaKnown RBP9.39□□□□□ -0.91
FXR1-203ENST00000445140 PHACTR2O75167 634 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 CILPO75339 1184 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 ADCY5O95622 1261 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 GYPCP04921 128 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 ALDH2P05091 517 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 BCAR1P56945 870 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 BPIFB4P59827 614 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 SHHQ15465 462 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 APPL2Q8NEU8 664 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 PIK3R5Q8WYR1 880 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 IGSF21Q96ID5 467 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 PKMYT1Q99640 499 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 RXFP1Q9HBX9 757 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 SPG21Q9NZD8 308 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 FNIP2Q9P278 1114 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 NUB1Q9Y5A7 615 aa9.39□□□□□ -0.91
FXR1-203ENST00000445140 OR6C75A6NL08 312 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 F8VZ95 297 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 NRP1O14786 923 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 MFAP3LO75121 409 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 FERP16591 822 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 SYN1P17600 705 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 SLC9A1P19634 815 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 CLCNKBP51801 687 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 AFF1P51825 1210 aaKnown RBP9.38□□□□□ -0.91
FXR1-203ENST00000445140 CCDC173Q0VFZ6 552 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 BTG3Q14201 252 aaPredicted RBP9.38□□□□□ -0.91
FXR1-203ENST00000445140 ARHGAP17Q68EM7 881 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 KCNT2Q6UVM3 1135 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 OTOP2Q7RTS6 562 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 ZNF280BQ86YH2 543 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 KBTBD7Q8WVZ9 684 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 KREMEN1Q96MU8 473 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 UBE2OQ9C0C9 1292 aaKnown RBP9.38□□□□□ -0.91
FXR1-203ENST00000445140 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.38□□□□□ -0.91
FXR1-203ENST00000445140 BARX2Q9UMQ3 279 aaPredicted RBP9.38□□□□□ -0.91
FXR1-203ENST00000445140 FAN1Q9Y2M0 1017 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 H7C4K7 107 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 SPTLC1O15269 473 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 KIF4AO95239 1232 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 SOD2P04179 222 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 POU3F3P20264 500 aaPredicted RBP9.38□□□□□ -0.91
FXR1-203ENST00000445140 TNNC1P63316 161 aa9.38□□□□□ -0.91
FXR1-203ENST00000445140 DSG1Q02413 1049 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms