RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 TMEM174Q8WUU8 243 aa20.1■□□□□ 0.81
CCDC188-202ENST00000444532 BORCS6Q96GS4 357 aa20.1■□□□□ 0.81
CCDC188-202ENST00000444532 ANKRD36BP1Q96IX9 119 aa20.1■□□□□ 0.81
CCDC188-202ENST00000444532 LIMD1Q9UGP4 676 aa20.1■□□□□ 0.81
CCDC188-202ENST00000444532 TNNC2P02585 160 aa20.09■□□□□ 0.81
CCDC188-202ENST00000444532 POLR2BP30876 1174 aaKnown RBP20.09■□□□□ 0.81
CCDC188-202ENST00000444532 RBP5P82980 135 aa20.09■□□□□ 0.81
CCDC188-202ENST00000444532 ZXDAP98168 799 aa20.09■□□□□ 0.81
CCDC188-202ENST00000444532 KCNB1Q14721 858 aa20.09■□□□□ 0.81
CCDC188-202ENST00000444532 GRASPQ7Z6J2 395 aaPredicted RBP20.09■□□□□ 0.81
CCDC188-202ENST00000444532 WDR49Q8IV35 697 aa20.09■□□□□ 0.81
CCDC188-202ENST00000444532 CXorf38Q8TB03 319 aa20.09■□□□□ 0.81
CCDC188-202ENST00000444532 MTMR12Q9C0I1 747 aa20.09■□□□□ 0.81
CCDC188-202ENST00000444532 CYP4F11Q9HBI6 524 aa20.09■□□□□ 0.81
CCDC188-202ENST00000444532 C11orf16Q9NQ32 467 aa20.09■□□□□ 0.81
CCDC188-202ENST00000444532 POLIQ9UNA4 740 aa20.09■□□□□ 0.81
CCDC188-202ENST00000444532 MYO10Q9HD67 2058 aa20.09■□□□□ 0.81
CCDC188-202ENST00000444532 TSC2P49815 1807 aa20.09■□□□□ 0.81
CCDC188-202ENST00000444532 PDXKO00764 312 aa20.08■□□□□ 0.81
CCDC188-202ENST00000444532 PRPF40AO75400 957 aaKnown RBP20.08■□□□□ 0.81
CCDC188-202ENST00000444532 SEC24AO95486 1093 aa20.08■□□□□ 0.81
CCDC188-202ENST00000444532 LRG1P02750 347 aa20.08■□□□□ 0.81
CCDC188-202ENST00000444532 GBP2P32456 591 aaPredicted RBP20.08■□□□□ 0.81
CCDC188-202ENST00000444532 FAM160A1Q05DH4 1040 aa20.08■□□□□ 0.81
CCDC188-202ENST00000444532 CYP24A1Q07973 514 aa20.08■□□□□ 0.81
CCDC188-202ENST00000444532 ADCY1Q08828 1119 aa20.08■□□□□ 0.81
CCDC188-202ENST00000444532 GPR17Q13304 367 aa20.08■□□□□ 0.81
CCDC188-202ENST00000444532 PSMD6Q15008 389 aa20.08■□□□□ 0.81
CCDC188-202ENST00000444532 RNF19BQ6ZMZ0 732 aa20.08■□□□□ 0.81
CCDC188-202ENST00000444532 SLC9A9Q8IVB4 645 aa20.08■□□□□ 0.81
CCDC188-202ENST00000444532 THEM5Q8N1Q8 247 aa20.08■□□□□ 0.81
CCDC188-202ENST00000444532 ENGASEQ8NFI3 743 aa20.08■□□□□ 0.81
CCDC188-202ENST00000444532 MFSD14AQ96MC6 490 aa20.08■□□□□ 0.81
CCDC188-202ENST00000444532 FNBP1Q96RU3 617 aa20.08■□□□□ 0.81
CCDC188-202ENST00000444532 LRFN3Q9BTN0 628 aa20.08■□□□□ 0.81
CCDC188-202ENST00000444532 KCTD10Q9H3F6 313 aa20.08■□□□□ 0.81
CCDC188-202ENST00000444532 SORCS3Q9UPU3 1222 aa20.08■□□□□ 0.81
CCDC188-202ENST00000444532 R3HCC1Q9Y3T6 440 aaKnown RBP20.08■□□□□ 0.81
CCDC188-202ENST00000444532 ZFP37Q9Y6Q3 630 aaPredicted RBP20.08■□□□□ 0.81
CCDC188-202ENST00000444532 PRR33A8MZF0 331 aa20.07■□□□□ 0.8
CCDC188-202ENST00000444532 EXOC3O60645 756 aa20.07■□□□□ 0.8
CCDC188-202ENST00000444532 N4BP1O75113 896 aaKnown RBP20.07■□□□□ 0.8
CCDC188-202ENST00000444532 KRT19P08727 400 aa20.07■□□□□ 0.8
CCDC188-202ENST00000444532 FSHRP23945 695 aa20.07■□□□□ 0.8
CCDC188-202ENST00000444532 SNW1Q13573 536 aaKnown RBP20.07■□□□□ 0.8
CCDC188-202ENST00000444532 OR5B17Q8NGF7 314 aa20.07■□□□□ 0.8
CCDC188-202ENST00000444532 DMAC2Q9NW81 257 aa20.07■□□□□ 0.8
CCDC188-202ENST00000444532 GDAP2Q9NXN4 497 aa20.07■□□□□ 0.8
CCDC188-202ENST00000444532 EPS15L1Q9UBC2 864 aa20.07■□□□□ 0.8
CCDC188-202ENST00000444532 SIX4Q9UIU6 781 aa20.07■□□□□ 0.8
CCDC188-202ENST00000444532 INSL5Q9Y5Q6 135 aa20.07■□□□□ 0.8
CCDC188-202ENST00000444532 PTPRJQ12913 1337 aa20.06■□□□□ 0.8
CCDC188-202ENST00000444532 FAM86C2PA6NEL3 165 aa20.06■□□□□ 0.8
CCDC188-202ENST00000444532 PTPN2P17706 415 aa20.06■□□□□ 0.8
CCDC188-202ENST00000444532 TNNI1P19237 187 aa20.06■□□□□ 0.8
CCDC188-202ENST00000444532 MYO1EQ12965 1108 aa20.06■□□□□ 0.8
CCDC188-202ENST00000444532 MTMR3Q13615 1198 aa20.06■□□□□ 0.8
CCDC188-202ENST00000444532 WSCD1Q658N2 575 aa20.06■□□□□ 0.8
CCDC188-202ENST00000444532 LMBRD2Q68DH5 695 aaPredicted RBP20.06■□□□□ 0.8
CCDC188-202ENST00000444532 UBALD2Q8IYN6 164 aa20.06■□□□□ 0.8
CCDC188-202ENST00000444532 DOCK6Q96HP0 2047 aa20.06■□□□□ 0.8
CCDC188-202ENST00000444532 TIGD1Q96MW7 591 aa20.06■□□□□ 0.8
CCDC188-202ENST00000444532 MYADMQ96S97 322 aa20.06■□□□□ 0.8
CCDC188-202ENST00000444532 CGRRF1Q99675 332 aa20.06■□□□□ 0.8
CCDC188-202ENST00000444532 IGSF9Q9P2J2 1179 aa20.06■□□□□ 0.8
CCDC188-202ENST00000444532 DNMT3BQ9UBC3 853 aaKnown RBP20.06■□□□□ 0.8
CCDC188-202ENST00000444532 CALUO43852 315 aaPredicted RBP20.05■□□□□ 0.8
CCDC188-202ENST00000444532 HUS1O60921 280 aa20.05■□□□□ 0.8
CCDC188-202ENST00000444532 OR4Q2P0C623 313 aa20.05■□□□□ 0.8
CCDC188-202ENST00000444532 DLATP10515 647 aaKnown RBP20.05■□□□□ 0.8
CCDC188-202ENST00000444532 LAMP2P13473 410 aa20.05■□□□□ 0.8
CCDC188-202ENST00000444532 NTHL1P78549 312 aa20.05■□□□□ 0.8
CCDC188-202ENST00000444532 BFSP1Q12934 665 aa20.05■□□□□ 0.8
CCDC188-202ENST00000444532 PABPC1LQ4VXU2 614 aaKnown RBP20.05■□□□□ 0.8
CCDC188-202ENST00000444532 TRIM67Q6ZTA4 783 aa20.05■□□□□ 0.8
CCDC188-202ENST00000444532 GET4Q7L5D6 327 aaPredicted RBP20.05■□□□□ 0.8
CCDC188-202ENST00000444532 TMEM86AQ8N2M4 240 aa20.05■□□□□ 0.8
CCDC188-202ENST00000444532 ELMOD1Q8N336 334 aa20.05■□□□□ 0.8
CCDC188-202ENST00000444532 GUF1Q8N442 669 aaKnown RBP20.05■□□□□ 0.8
CCDC188-202ENST00000444532 NXPE3Q969Y0 559 aa20.05■□□□□ 0.8
CCDC188-202ENST00000444532 CCDC127Q96BQ5 260 aa20.05■□□□□ 0.8
CCDC188-202ENST00000444532 FAM84AQ96KN4 292 aa20.05■□□□□ 0.8
CCDC188-202ENST00000444532 AVENQ9NQS1 362 aaPredicted RBP20.05■□□□□ 0.8
CCDC188-202ENST00000444532 HCFC1R1Q9NWW0 138 aa20.05■□□□□ 0.8
CCDC188-202ENST00000444532 HSFX1Q9UBD0 423 aa20.05■□□□□ 0.8
CCDC188-202ENST00000444532 HOOK1Q9UJC3 728 aaKnown RBP20.05■□□□□ 0.8
CCDC188-202ENST00000444532 TRAF3IP3Q9Y228 551 aa20.05■□□□□ 0.8
CCDC188-202ENST00000444532 TRIOO75962 3097 aa20.05■□□□□ 0.8
CCDC188-202ENST00000444532 DOCK8Q8NF50 2099 aa20.04■□□□□ 0.8
CCDC188-202ENST00000444532 NOTCH4Q99466 2003 aa20.04■□□□□ 0.8
CCDC188-202ENST00000444532 ASGR2P07307 311 aa20.04■□□□□ 0.8
CCDC188-202ENST00000444532 SIGLEC14Q08ET2 396 aa20.04■□□□□ 0.8
CCDC188-202ENST00000444532 SMARCB1Q12824 385 aa20.04■□□□□ 0.8
CCDC188-202ENST00000444532 SCARA3Q6AZY7 606 aa20.04■□□□□ 0.8
CCDC188-202ENST00000444532 CENPPQ6IPU0 288 aa20.04■□□□□ 0.8
CCDC188-202ENST00000444532 TRAPPC11Q7Z392 1133 aa20.04■□□□□ 0.8
CCDC188-202ENST00000444532 OR10T2Q8NGX3 314 aa20.04■□□□□ 0.8
CCDC188-202ENST00000444532 SPATA18Q8TC71 538 aa20.04■□□□□ 0.8
CCDC188-202ENST00000444532 HPDLQ96IR7 371 aa20.04■□□□□ 0.8
CCDC188-202ENST00000444532 PGLYRP2Q96PD5 576 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms