RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 BRSK2Q8IWQ3 736 aa11.77□□□□□ -0.53
SF3A1-203ENST00000444440 CD302Q8IX05 232 aa11.77□□□□□ -0.53
SF3A1-203ENST00000444440 MCRS1Q96EZ8 462 aa11.77□□□□□ -0.53
SF3A1-203ENST00000444440 TSPAN18Q96SJ8 248 aa11.77□□□□□ -0.53
SF3A1-203ENST00000444440 KXD1Q9BQD3 176 aa11.77□□□□□ -0.53
SF3A1-203ENST00000444440 CORO1BQ9BR76 489 aa11.77□□□□□ -0.53
SF3A1-203ENST00000444440 DNAJC25Q9H1X3 360 aa11.77□□□□□ -0.53
SF3A1-203ENST00000444440 KCNH6Q9H252 994 aa11.77□□□□□ -0.53
SF3A1-203ENST00000444440 BLZF1Q9H2G9 400 aa11.77□□□□□ -0.53
SF3A1-203ENST00000444440 FAM86C1Q9NVL1 165 aa11.77□□□□□ -0.53
SF3A1-203ENST00000444440 YIPF1Q9Y548 306 aa11.77□□□□□ -0.53
SF3A1-203ENST00000444440 PCDHB13Q9Y5F0 798 aa11.77□□□□□ -0.53
SF3A1-203ENST00000444440 CACNA1HO95180 2353 aa11.77□□□□□ -0.53
SF3A1-203ENST00000444440 KIAA1549LQ6ZVL6 1849 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.76□□□□□ -0.53
SF3A1-203ENST00000444440 MTMR11A4FU01 709 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 TGFB1I1O43294 461 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 LRG1P02750 347 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 CYP11A1P05108 521 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 SRFP11831 508 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 GJA1P17302 382 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 TYMPP19971 482 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 GARTP22102 1010 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 FCARP24071 287 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 ELF1P32519 619 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 GPC5P78333 572 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 ASIC1P78348 528 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 CUL4BQ13620 913 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 BECN1Q14457 450 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 POSTNQ15063 836 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 CCDC142Q17RM4 750 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 ASTLQ6HA08 431 aaPredicted RBP11.76□□□□□ -0.53
SF3A1-203ENST00000444440 CNNM4Q6P4Q7 775 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 RTL10Q7L3V2 364 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 CCDC65Q8IXS2 484 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 C1orf127Q8N9H9 656 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 ATAD1Q8NBU5 361 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 FLCNQ8NFG4 579 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 ZSWIM3Q96MP5 696 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 C7orf25Q9BPX7 421 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 LRRC3Q9BY71 257 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 PDE11AQ9HCR9 933 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 AVENQ9NQS1 362 aaPredicted RBP11.76□□□□□ -0.53
SF3A1-203ENST00000444440 RBAKQ9NYW8 714 aaPredicted RBP11.76□□□□□ -0.53
SF3A1-203ENST00000444440 SIX4Q9UIU6 781 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 RCOR1Q9UKL0 485 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 EXOC7Q9UPT5 735 aa11.76□□□□□ -0.53
SF3A1-203ENST00000444440 MRPS23Q9Y3D9 190 aaKnown RBP11.76□□□□□ -0.53
SF3A1-203ENST00000444440 CYB561D2O14569 222 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 HCRTO43612 131 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 ACTN4O43707 911 aaKnown RBP11.75□□□□□ -0.53
SF3A1-203ENST00000444440 EXTL3O43909 919 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 IL18RAPO95256 599 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 ITGB3P05106 788 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 ODC1P11926 461 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 PTPN2P17706 415 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 POLR2BP30876 1174 aaKnown RBP11.75□□□□□ -0.53
SF3A1-203ENST00000444440 AFMP43652 599 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 ME1P48163 572 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 TAF6P49848 677 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 POU5F1Q01860 360 aaKnown RBP11.75□□□□□ -0.53
SF3A1-203ENST00000444440 DUSP4Q13115 394 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 GPR17Q13304 367 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 ALCAMQ13740 583 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 FAM26FQ5R3K3 315 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 WSCD1Q658N2 575 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 TANGO2Q6ICL3 276 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 CENPPQ6IPU0 288 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 ARMCX5Q6P1M9 558 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 ALYREFQ86V81 257 aaKnown RBP11.75□□□□□ -0.53
SF3A1-203ENST00000444440 LRRTM3Q86VH5 581 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 TMC8Q8IU68 726 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 CBWD2Q8IUF1 395 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 SYCP3Q8IZU3 236 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 IQUBQ8NA54 791 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 ZNF507Q8TCN5 953 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 KCNG4Q8TDN1 519 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 NOC3LQ8WTT2 800 aaKnown RBP11.75□□□□□ -0.53
SF3A1-203ENST00000444440 SCFD1Q8WVM8 642 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 NXPE3Q969Y0 559 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 PYM1Q9BRP8 204 aaKnown RBP11.75□□□□□ -0.53
SF3A1-203ENST00000444440 MTMR12Q9C0I1 747 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 MFSD1Q9H3U5 465 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 CUEDC2Q9H467 287 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 ZNF334Q9HCZ1 680 aaPredicted RBP11.75□□□□□ -0.53
SF3A1-203ENST00000444440 SLC2A4RGQ9NR83 387 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 WNT16Q9UBV4 365 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 SERTAD1Q9UHV2 236 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 FBXL21Q9UKT6 434 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 KCNH3Q9ULD8 1083 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 SLC27A5Q9Y2P5 690 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 ZFP37Q9Y6Q3 630 aaPredicted RBP11.75□□□□□ -0.53
SF3A1-203ENST00000444440 ATG2BQ96BY7 2078 aa11.75□□□□□ -0.53
SF3A1-203ENST00000444440 FRYLO94915 3013 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 OR6C75A6NL08 312 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 H0Y858 1186 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 TULP1O00294 542 aaPredicted RBP11.74□□□□□ -0.53
SF3A1-203ENST00000444440 CLIC2O15247 247 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 KLRC4O43908 158 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 LRRN2O75325 713 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms