RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 IKQ13123 557 aaPredicted RBP5.27□□□□□ -1.57
HERC1-201ENST00000443617 RASA3Q14644 834 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 CYTH1Q15438 398 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 NCCRP1Q6ZVX7 275 aaPredicted RBP5.27□□□□□ -1.57
HERC1-201ENST00000443617 NUP93Q8N1F7 819 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 RFWD2Q8NHY2 731 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 FAM81BQ96LP2 452 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 ARHGEF35A5YM69 484 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 STAMBPO95630 424 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 RALAP11233 206 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 TNFAIP8L3Q5GJ75 292 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 OR6Y1Q8NGX8 325 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 CCDC138Q96M89 665 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 HAPLN3Q96S86 360 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 KCTD10Q9H3F6 313 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 COG5Q9UP83 839 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 LZTS1Q9Y250 596 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 PCDHA1Q9Y5I3 950 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 MAD1L1Q9Y6D9 718 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 AGLP35573 1532 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 BTBD19C9JJ37 291 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 ADCY6O43306 1168 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 MCF2P10911 925 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 ADRA1DP25100 572 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 MRPS9P82933 396 aaKnown RBP5.27□□□□□ -1.57
HERC1-201ENST00000443617 SULT2A1Q06520 285 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 CHRNDQ07001 517 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 ZNF423Q2M1K9 1284 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 TTBK2Q6IQ55 1244 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 LPCAT2Q7L5N7 544 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 LRRC43Q8N309 656 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 TRIM11Q96F44 468 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 C6orf203Q9P0P8 240 aaPredicted RBP5.27□□□□□ -1.57
HERC1-201ENST00000443617 SLC37A4O43826 429 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 GMNNO75496 209 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 SPIDRQ14159 915 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 MAPK6Q16659 721 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 ODR4Q5SWX8 454 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 TTC7BQ86TV6 843 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 POU5F2Q8N7G0 328 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 KRT82Q9NSB4 513 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 FRMPD2Q68DX3 1309 aaPredicted RBP5.27□□□□□ -1.57
HERC1-201ENST00000443617 KCTD21Q4G0X4 260 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 TBC1D9BQ66K14 1250 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 KRT80Q6KB66 452 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 FAM178BQ8IXR5 827 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 TAB3Q8N5C8 712 aaPredicted RBP5.27□□□□□ -1.57
HERC1-201ENST00000443617 LNX1Q8TBB1 728 aaPredicted RBP5.27□□□□□ -1.57
HERC1-201ENST00000443617 CLPTM1LQ96KA5 538 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 PARVGQ9HBI0 331 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 SSU72Q9NP77 194 aaKnown RBP5.27□□□□□ -1.57
HERC1-201ENST00000443617 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.27□□□□□ -1.57
HERC1-201ENST00000443617 FSCN2O14926 492 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 ADAMTS3O15072 1205 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 CYP11B2P19099 503 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 SMARCA1P28370 1054 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 MAP3K10Q02779 954 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 PPP2R5CQ13362 524 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 DENND1AQ8TEH3 1009 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 IFT122Q9HBG6 1241 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 RRN3Q9NYV6 651 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 ZNF180Q9UJW8 692 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 PCDHA2Q9Y5H9 948 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 LSM1O15116 133 aaKnown RBP5.27□□□□□ -1.57
HERC1-201ENST00000443617 GCLMP48507 274 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 CDC16Q13042 620 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 HIC1Q14526 733 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 CHI3L2Q15782 390 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 RAPH1Q70E73 1250 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 KBTBD2Q8IY47 623 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 SIX6OS1Q8N1H7 587 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 SH3RF3Q8TEJ3 882 aaPredicted RBP5.27□□□□□ -1.57
HERC1-201ENST00000443617 COA7Q96BR5 231 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 COX4I2Q96KJ9 171 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 SRPK1Q96SB4 655 aaKnown RBP5.27□□□□□ -1.57
HERC1-201ENST00000443617 FBXO6Q9NRD1 293 aaPredicted RBP5.27□□□□□ -1.57
HERC1-201ENST00000443617 TUBA8Q9NY65 449 aaPredicted RBP5.27□□□□□ -1.57
HERC1-201ENST00000443617 PLK2Q9NYY3 685 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 HERC5Q9UII4 1024 aaKnown RBP5.27□□□□□ -1.57
HERC1-201ENST00000443617 TM7SF2O76062 418 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 ZNF200P98182 395 aaPredicted RBP5.27□□□□□ -1.57
HERC1-201ENST00000443617 STX3Q13277 289 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 ECM1Q16610 540 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 PDSS2Q86YH6 399 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 MAPKAPK5Q8IW41 473 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 FDFT1P37268 417 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 DCUN1D2Q6PH85 259 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 ALYREFQ86V81 257 aaKnown RBP5.27□□□□□ -1.57
HERC1-201ENST00000443617 RBM15BQ8NDT2 890 aaKnown RBP5.27□□□□□ -1.57
HERC1-201ENST00000443617 THAP1Q9NVV9 213 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 DNAJB4Q9UDY4 337 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 ANAPC7Q9UJX3 599 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 COQ6Q9Y2Z9 468 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 ATP9BO43861 1147 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 SH3D19Q5HYK7 790 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 AAGABQ6PD74 315 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 TCP10LQ8TDR4 215 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 SPATA31D3P0C874 917 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 RFC1P35251 1148 aaPredicted RBP5.27□□□□□ -1.57
HERC1-201ENST00000443617 TTLL12Q14166 644 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms