RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 EDN1P05305 212 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 ADRB2P07550 413 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 PNPLA4P41247 253 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 MLLT6P55198 1093 aaPredicted RBP8.43□□□□□ -1.06
CD44-211ENST00000442151 CUL4AQ13619 759 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 VEPH1Q14D04 833 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 PTPAQ15257 358 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 MLF2Q15773 248 aaPredicted RBP8.43□□□□□ -1.06
CD44-211ENST00000442151 ZBTB6Q15916 424 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 TAF12Q16514 161 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 ARHGAP15Q53QZ3 475 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 ARSHQ5FYA8 562 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 ZBTB41Q5SVQ8 909 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 SPATA1Q5VX52 437 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 CWF19L1Q69YN2 538 aaKnown RBP8.43□□□□□ -1.06
CD44-211ENST00000442151 ADALQ6DHV7 355 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 KCNK18Q7Z418 384 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 YAF2Q8IY57 180 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 CEP120Q8N960 986 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 KCNG4Q8TDN1 519 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 RSAD2Q8WXG1 361 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 IRF7Q92985 503 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 GCNAQ96QF7 691 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 ACCSQ96QU6 501 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 CORO1BQ9BR76 489 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 REEP2Q9BRK0 252 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 TRPV5Q9NQA5 729 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 CACNG4Q9UBN1 327 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 C2CD2Q9Y426 696 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 INSL5Q9Y5Q6 135 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 MORC2Q9Y6X9 1032 aaPredicted RBP8.43□□□□□ -1.06
CD44-211ENST00000442151 PLXNA3P51805 1871 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 WDR27A2RRH5 827 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 LACTBL1A8MY62 500 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 ABLIM1O14639 778 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 LAMTOR5O43504 91 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 PLCG1P19174 1290 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 NRLP54845 237 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 GPC5P78333 572 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 SOX4Q06945 474 aaPredicted RBP8.43□□□□□ -1.06
CD44-211ENST00000442151 ADCY1Q08828 1119 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 GPR17Q13304 367 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 MCM6Q14566 821 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 TMEM132DQ14C87 1099 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 SURF1Q15526 300 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 ZNF528Q3MIS6 628 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 OVOS1Q6IE37 1185 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 PARM1Q6UWI2 310 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 CD300LGQ6UXG3 332 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 MAP4K3Q8IVH8 894 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 C1orf210Q8IVY1 113 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 DCP1BQ8IZD4 617 aaKnown RBP8.43□□□□□ -1.06
CD44-211ENST00000442151 GPR161Q8N6U8 529 aaKnown RBP8.43□□□□□ -1.06
CD44-211ENST00000442151 ITFG1Q8TB96 612 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 C18orf25Q96B23 403 aaPredicted RBP8.43□□□□□ -1.06
CD44-211ENST00000442151 MCRS1Q96EZ8 462 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 ZNF396Q96N95 335 aaPredicted RBP8.43□□□□□ -1.06
CD44-211ENST00000442151 ZMAT2Q96NC0 199 aaKnown RBP8.43□□□□□ -1.06
CD44-211ENST00000442151 TRMT61BQ9BVS5 477 aaKnown RBP8.43□□□□□ -1.06
CD44-211ENST00000442151 TMEM206Q9H813 350 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 BRD9Q9H8M2 597 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 GOLGA2P5Q9HBQ8 144 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 FBXO4Q9UKT5 387 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 AGO2Q9UKV8 859 aaKnown RBP8.43□□□□□ -1.06
CD44-211ENST00000442151 ZNF318Q5VUA4 2279 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 KRBA1A5PL33 1030 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 SOBPA7XYQ1 873 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 I3L4J1 428 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 DPYSL4O14531 572 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 ZNF263O14978 683 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 LMNAP02545 664 aaKnown RBP8.42□□□□□ -1.06
CD44-211ENST00000442151 CXCL8P10145 99 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 SDHBP21912 280 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 NTHL1P78549 312 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 KARSQ15046 597 aaKnown RBP8.42□□□□□ -1.06
CD44-211ENST00000442151 NPAS3Q8IXF0 933 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 CCDC65Q8IXS2 484 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 SYCP3Q8IZU3 236 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 C3orf58Q8NDZ4 430 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 PJA1Q8NG27 643 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 SPATA18Q8TC71 538 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 CSGALNACT1Q8TDX6 532 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 POMGNT1Q8WZA1 660 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 ZNF560Q96MR9 790 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 PYM1Q9BRP8 204 aaKnown RBP8.42□□□□□ -1.06
CD44-211ENST00000442151 FAM126AQ9BYI3 521 aaPredicted RBP8.42□□□□□ -1.06
CD44-211ENST00000442151 SMOC2Q9H3U7 446 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 MRPL44Q9H9J2 332 aaKnown RBP8.42□□□□□ -1.06
CD44-211ENST00000442151 FAM86C1Q9NVL1 165 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 CPSF3Q9UKF6 684 aaKnown RBP8.42□□□□□ -1.06
CD44-211ENST00000442151 PCDHGA10Q9Y5H3 936 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 KMT2EQ8IZD2 1858 aa8.42□□□□□ -1.06
CD44-211ENST00000442151 NPHP3-ACAD11A0A0J9YXS1 232 aa8.41□□□□□ -1.06
CD44-211ENST00000442151 FAM170BA6NMN3 283 aa8.41□□□□□ -1.06
CD44-211ENST00000442151 PI15O43692 258 aa8.41□□□□□ -1.06
CD44-211ENST00000442151 CYP11A1P05108 521 aa8.41□□□□□ -1.06
CD44-211ENST00000442151 PSMC3P17980 439 aa8.41□□□□□ -1.06
CD44-211ENST00000442151 AARSP49588 968 aaKnown RBP eCLIP8.41□□□□□ -1.06
CD44-211ENST00000442151 TAF6P49848 677 aa8.41□□□□□ -1.06
CD44-211ENST00000442151 AMPD2Q01433 879 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms