RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 NCOA4Q13772 614 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 SMTNL2Q2TAL5 461 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 TMEM121Q9BTD3 319 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 NOD2Q9HC29 1040 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 HACL1Q9UJ83 578 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 ZNF214Q9UL59 606 aaPredicted RBP14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 EXOC1LA0A1B0GW35 172 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 ATP6V1G2O95670 118 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 MYBL1P10243 752 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 FOXN2P32314 431 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 OGDHQ02218 1023 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 GAD2Q05329 585 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 ORC1Q13415 861 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 KCNT1Q5JUK3 1230 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 DCUN1D2Q6PH85 259 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 SPATA21Q7Z572 469 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 MTMR14Q8NCE2 650 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 FEZF2Q8TBJ5 459 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 MAIP1Q8WWC4 291 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 CKAP2Q8WWK9 683 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 VPS37BQ9H9H4 285 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 MRPL47Q9HD33 250 aaKnown RBP14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 CYP39A1Q9NYL5 469 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 NKIRAS1Q9NYS0 192 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 LOC102724159A0A0B4J2E5 919 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 ZC3H11AO75152 810 aaKnown RBP eCLIP14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 SUN1O94901 812 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 PECAM1P16284 738 aaPredicted RBP14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 DNAJC3Q13217 504 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 PWP2Q15269 919 aaKnown RBP14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 XKR3Q5GH77 459 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 CGB2Q6NT52 195 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 ANKMY2Q8IV38 441 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 JDP2Q8WYK2 163 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 MTMR12Q9C0I1 747 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 STK32BQ9NY57 414 aa14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 MAP3K20Q9NYL2 800 aaKnown RBP14.35□□□□□ -0.11
HERPUD1-204ENST00000439977 LRRD1A4D1F6 860 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 IGF2BP3O00425 579 aaKnown RBP eCLIP14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 MGRN1O60291 552 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 CDH16O75309 829 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 KLRC2P26717 231 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 MARK3P27448 753 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 MAN1A1P33908 653 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 ZNF252P-AS1Q0IIN9 211 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 PTP4A2Q12974 167 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 ACCSLQ4AC99 568 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 SYCP2LQ5T4T6 812 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 ZNF677Q86XU0 584 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 KIRREL3Q8IZU9 778 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 P3H4Q92791 437 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 TRIM11Q96F44 468 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 SENP7Q9BQF6 1050 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 SLCO1B3Q9NPD5 702 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 TJP2Q9UDY2 1190 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 POTEJP0CG39 1038 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 SRGAP2CP0DJJ0 459 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 KRT15P19012 456 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 ATP5DP30049 168 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 WDR4P57081 412 aaKnown RBP14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 MYL6P60660 151 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 NCALDP61601 193 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 MGAT5Q09328 741 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 PLEKHA7Q6IQ23 1121 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 KATNAL2Q8IYT4 538 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 ZBED8Q8IZ13 594 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 SLC7A3Q8WY07 619 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 ZNF302Q9NR11 478 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 PARVAQ9NVD7 372 aa14.34□□□□□ -0.11
HERPUD1-204ENST00000439977 PSTPIP1O43586 416 aa14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 SUPT20HL2P0C7V6 817 aa14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 HIRAP54198 1017 aaPredicted RBP14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 PKN2Q16513 984 aaKnown RBP14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 SUPT20HL1Q3ZLR7 823 aa14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 SYDE1Q6ZW31 735 aaPredicted RBP14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 MICALL2Q8IY33 904 aa14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 ZNF280CQ8ND82 737 aa14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 EXD1Q8NHP7 514 aa14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 KLHL29Q96CT2 875 aa14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 ZBTB10Q96DT7 871 aa14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 ZWILCHQ9H900 591 aa14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 ZNFX1Q9P2E3 1918 aaKnown RBP14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 SGK1O00141 431 aa14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 LIASO43766 372 aa14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 NRLP54845 237 aa14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 CLDN10P78369 228 aa14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 DLK2Q6UY11 383 aa14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 RDM1Q8NG50 284 aa14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 SLITRK1Q96PX8 696 aa14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 CCDC77Q9BR77 488 aa14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 PITPNM3Q9BZ71 974 aa14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 C12orf65Q9H3J6 166 aaKnown RBP14.33□□□□□ -0.12
HERPUD1-204ENST00000439977 OAS1P00973 400 aaKnown RBP14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 PTPRAP18433 802 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 ALDH5A1P51649 535 aaPredicted RBP14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 GPAT2Q6NUI2 795 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 NCAPGQ9BPX3 1015 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 PORCNQ9H237 461 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 PICK1Q9NRD5 415 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 CNTNAP2Q9UHC6 1331 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms