RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 ZSWIM2Q8NEG5 633 aa12.33□□□□□ -0.44
SMPD4-209ENST00000439886 SLC26A7Q8TE54 656 aa12.33□□□□□ -0.44
SMPD4-209ENST00000439886 PYROXD1Q8WU10 500 aa12.33□□□□□ -0.44
SMPD4-209ENST00000439886 NRG4Q8WWG1 115 aa12.33□□□□□ -0.44
SMPD4-209ENST00000439886 CLIP3Q96DZ5 547 aa12.33□□□□□ -0.44
SMPD4-209ENST00000439886 AGAP3Q96P47 875 aa12.33□□□□□ -0.44
SMPD4-209ENST00000439886 ZNF184Q99676 751 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-209ENST00000439886 WDR37Q9Y2I8 494 aa12.33□□□□□ -0.44
SMPD4-209ENST00000439886 FAM86B1E9PN63 330 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 GSC2O15499 205 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 MT-ND3P03897 115 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 FAM86B2P0C5J1 330 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 SPATA31C1P0DKV0 1188 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 COG7P83436 770 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 ATP13A4Q4VNC1 1196 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 ST13P4Q8IZP2 240 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-209ENST00000439886 TCP10LQ8TDR4 215 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 DNAJC1Q96KC8 554 aaKnown RBP12.32□□□□□ -0.44
SMPD4-209ENST00000439886 TMEM120AQ9BXJ8 343 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 DDX18Q9NVP1 670 aaKnown RBP12.32□□□□□ -0.44
SMPD4-209ENST00000439886 LARSQ9P2J5 1176 aaKnown RBP12.32□□□□□ -0.44
SMPD4-209ENST00000439886 ANGPTL2Q9UKU9 493 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 BARX2Q9UMQ3 279 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-209ENST00000439886 DDX60Q8IY21 1712 aaKnown RBP12.32□□□□□ -0.44
SMPD4-209ENST00000439886 TIAM2Q8IVF5 1701 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 HNRNPRO43390 633 aaKnown RBP12.32□□□□□ -0.44
SMPD4-209ENST00000439886 ZWINTO95229 277 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 PGM3O95394 542 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 MYL2P10916 166 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 USP46P62068 366 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 NR1H3Q13133 447 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 MAP7Q14244 749 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 SLFN13Q68D06 897 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 TPTE2Q6XPS3 522 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 TRABD2AQ86V40 505 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 SPATA24Q86W54 205 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 EFCAB3Q8N7B9 438 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 PIP4K2CQ8TBX8 421 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 SPATA17Q96L03 361 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 FAM111AQ96PZ2 611 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 TUBGCP5Q96RT8 1024 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 HERPUD2Q9BSE4 406 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 DCLK3Q9C098 648 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 FHDC1Q9C0D6 1143 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-209ENST00000439886 MANSC1Q9H8J5 431 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 HOMER2Q9NSB8 354 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 GRID1Q9ULK0 1009 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 PHF24Q9UPV7 400 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 USP20Q9Y2K6 914 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 N6AMT1Q9Y5N5 214 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 ZNF142P52746 1687 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-209ENST00000439886 CAMTA1Q9Y6Y1 1673 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 CCDC88AQ3V6T2 1871 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 A6NJR5 290 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 MEI4A8MW99 385 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 BHMG1C9JSJ3 638 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-209ENST00000439886 E7ENQ6 273 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 ASMTLO95671 621 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 GAP43P17677 238 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 BGNP21810 368 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 HOXD11P31277 338 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-209ENST00000439886 ANKRD27Q96NW4 1050 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 MAK16Q9BXY0 300 aaKnown RBP12.32□□□□□ -0.44
SMPD4-209ENST00000439886 OSBPL8Q9BZF1 889 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 SLC13A1Q9BZW2 595 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 SLC17A7Q9P2U7 560 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 TUBGCP4Q9UGJ1 667 aa12.32□□□□□ -0.44
SMPD4-209ENST00000439886 CICQ96RK0 1608 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-209ENST00000439886 MSH4O15457 936 aa12.31□□□□□ -0.44
SMPD4-209ENST00000439886 ATP6V1B1P15313 513 aa12.31□□□□□ -0.44
SMPD4-209ENST00000439886 NSFP46459 744 aaKnown RBP12.31□□□□□ -0.44
SMPD4-209ENST00000439886 MFAP3P55082 362 aa12.31□□□□□ -0.44
SMPD4-209ENST00000439886 ZYXQ15942 572 aaKnown RBP12.31□□□□□ -0.44
SMPD4-209ENST00000439886 SHROOM1Q2M3G4 852 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-209ENST00000439886 DPY19L2P1Q6NXN4 242 aa12.31□□□□□ -0.44
SMPD4-209ENST00000439886 CCDC110Q8TBZ0 833 aa12.31□□□□□ -0.44
SMPD4-209ENST00000439886 NAP1L4Q99733 375 aaKnown RBP12.31□□□□□ -0.44
SMPD4-209ENST00000439886 TOPORSQ9NS56 1045 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-209ENST00000439886 EIF3FO00303 357 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-209ENST00000439886 TRPA1O75762 1119 aa12.31□□□□□ -0.44
SMPD4-209ENST00000439886 EYA4O95677 639 aa12.31□□□□□ -0.44
SMPD4-209ENST00000439886 LYNP07948 512 aa12.31□□□□□ -0.44
SMPD4-209ENST00000439886 GSTA2P09210 222 aa12.31□□□□□ -0.44
SMPD4-209ENST00000439886 RTP1P59025 263 aa12.31□□□□□ -0.44
SMPD4-209ENST00000439886 YWHAGP61981 247 aaKnown RBP eCLIP12.31□□□□□ -0.44
SMPD4-209ENST00000439886 PDK4Q16654 411 aa12.31□□□□□ -0.44
SMPD4-209ENST00000439886 NCCRP1Q6ZVX7 275 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-209ENST00000439886 ALYREFQ86V81 257 aaKnown RBP12.31□□□□□ -0.44
SMPD4-209ENST00000439886 RHPN2Q8IUC4 686 aa12.31□□□□□ -0.44
SMPD4-209ENST00000439886 RIBC1Q8N443 379 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-209ENST00000439886 GLIS1Q8NBF1 620 aa12.31□□□□□ -0.44
SMPD4-209ENST00000439886 SMC1BQ8NDV3 1235 aa12.31□□□□□ -0.44
SMPD4-209ENST00000439886 SH3TC2Q8TF17 1288 aa12.31□□□□□ -0.44
SMPD4-209ENST00000439886 C10orf82Q8WW14 230 aa12.31□□□□□ -0.44
SMPD4-209ENST00000439886 PYDC1Q8WXC3 89 aa12.31□□□□□ -0.44
SMPD4-209ENST00000439886 SERPINB13Q9UIV8 391 aa12.31□□□□□ -0.44
SMPD4-209ENST00000439886 AGTPBP1Q9UPW5 1226 aa12.31□□□□□ -0.44
SMPD4-209ENST00000439886 FAM237BA0A1B0GVD1 139 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 P4HA2O15460 535 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 KCNQ2O43526 872 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms