RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 DDX23Q9BUQ8 820 aaKnown RBP17.61■□□□□ 0.41
SNRPD3-204ENST00000439775 TNMDQ9H2S6 317 aa17.61■□□□□ 0.41
SNRPD3-204ENST00000439775 CUEDC2Q9H467 287 aa17.61■□□□□ 0.41
SNRPD3-204ENST00000439775 PANK4Q9NVE7 773 aa17.61■□□□□ 0.41
SNRPD3-204ENST00000439775 DPP3Q9NY33 737 aa17.61■□□□□ 0.41
SNRPD3-204ENST00000439775 TBC1D7Q9P0N9 293 aa17.61■□□□□ 0.41
SNRPD3-204ENST00000439775 DLGAP2Q9P1A6 1054 aa17.61■□□□□ 0.41
SNRPD3-204ENST00000439775 HSFX1Q9UBD0 423 aa17.61■□□□□ 0.41
SNRPD3-204ENST00000439775 SIT1Q9Y3P8 196 aa17.61■□□□□ 0.41
SNRPD3-204ENST00000439775 GFRA3O60609 400 aa17.6■□□□□ 0.41
SNRPD3-204ENST00000439775 LDHAP00338 332 aaKnown RBP17.6■□□□□ 0.41
SNRPD3-204ENST00000439775 FCARP24071 287 aa17.6■□□□□ 0.41
SNRPD3-204ENST00000439775 TAF6P49848 677 aa17.6■□□□□ 0.41
SNRPD3-204ENST00000439775 ANGPT1Q15389 498 aa17.6■□□□□ 0.41
SNRPD3-204ENST00000439775 MLF2Q15773 248 aaPredicted RBP17.6■□□□□ 0.41
SNRPD3-204ENST00000439775 E2F4Q16254 413 aa17.6■□□□□ 0.41
SNRPD3-204ENST00000439775 CENPPQ6IPU0 288 aa17.6■□□□□ 0.41
SNRPD3-204ENST00000439775 ARMCX5Q6P1M9 558 aa17.6■□□□□ 0.41
SNRPD3-204ENST00000439775 BRSK2Q8IWQ3 736 aa17.6■□□□□ 0.41
SNRPD3-204ENST00000439775 HS6ST3Q8IZP7 471 aa17.6■□□□□ 0.41
SNRPD3-204ENST00000439775 PDILTQ8N807 584 aa17.6■□□□□ 0.41
SNRPD3-204ENST00000439775 ASB16Q96NS5 453 aa17.6■□□□□ 0.41
SNRPD3-204ENST00000439775 PANK2Q9BZ23 570 aa17.6■□□□□ 0.41
SNRPD3-204ENST00000439775 LRRC27Q9C0I9 530 aa17.6■□□□□ 0.41
SNRPD3-204ENST00000439775 CRISPLD1Q9H336 500 aa17.6■□□□□ 0.41
SNRPD3-204ENST00000439775 TMEM206Q9H813 350 aa17.6■□□□□ 0.41
SNRPD3-204ENST00000439775 VPS13AQ96RL7 3174 aa17.6■□□□□ 0.41
SNRPD3-204ENST00000439775 KANSL1LA0AUZ9 987 aa17.59■□□□□ 0.41
SNRPD3-204ENST00000439775 MTMR11A4FU01 709 aa17.59■□□□□ 0.41
SNRPD3-204ENST00000439775 MOSPD3O75425 235 aa17.59■□□□□ 0.41
SNRPD3-204ENST00000439775 EPHB3P54753 998 aa17.59■□□□□ 0.41
SNRPD3-204ENST00000439775 DUSP4Q13115 394 aa17.59■□□□□ 0.41
SNRPD3-204ENST00000439775 SNW1Q13573 536 aaKnown RBP17.59■□□□□ 0.41
SNRPD3-204ENST00000439775 SV2CQ496J9 727 aa17.59■□□□□ 0.41
SNRPD3-204ENST00000439775 SLC44A4Q53GD3 710 aa17.59■□□□□ 0.41
SNRPD3-204ENST00000439775 FAM78AQ5JUQ0 283 aa17.59■□□□□ 0.41
SNRPD3-204ENST00000439775 TANGO2Q6ICL3 276 aa17.59■□□□□ 0.41
SNRPD3-204ENST00000439775 HSCBQ8IWL3 235 aa17.59■□□□□ 0.41
SNRPD3-204ENST00000439775 CCDC65Q8IXS2 484 aa17.59■□□□□ 0.41
SNRPD3-204ENST00000439775 OR10T2Q8NGX3 314 aa17.59■□□□□ 0.41
SNRPD3-204ENST00000439775 ZNF560Q96MR9 790 aa17.59■□□□□ 0.41
SNRPD3-204ENST00000439775 FAM213AQ9BRX8 229 aa17.59■□□□□ 0.41
SNRPD3-204ENST00000439775 FGFBP2Q9BYJ0 223 aa17.59■□□□□ 0.41
SNRPD3-204ENST00000439775 ZFP14Q9HCL3 533 aa17.59■□□□□ 0.41
SNRPD3-204ENST00000439775 KBTBD4Q9NVX7 518 aa17.59■□□□□ 0.41
SNRPD3-204ENST00000439775 DMDP11532 3685 aa17.59■□□□□ 0.41
SNRPD3-204ENST00000439775 NRG2O14511 850 aaPredicted RBP17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 CYB561D2O14569 222 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 CUTAO60888 179 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 DCNP07585 359 aaKnown RBP17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 PNPLA4P41247 253 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 ALDH1A3P47895 512 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 CNNM4Q6P4Q7 775 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 STXBP4Q6ZWJ1 553 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 METTL23Q86XA0 190 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 TMC8Q8IU68 726 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 SYCP3Q8IZU3 236 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 ATAD1Q8NBU5 361 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 DNASE1L2Q92874 299 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 SMARCD2Q92925 531 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 SAAL1Q96ER3 474 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 TMEM209Q96SK2 561 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 PYM1Q9BRP8 204 aaKnown RBP17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 LRRC3Q9BY71 257 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 OSBPL6Q9BZF3 934 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 PLA2G2FQ9BZM2 168 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 FOXQ1Q9C009 403 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 TRIM9Q9C026 710 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 ZCWPW1Q9H0M4 648 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 DNAJC25Q9H1X3 360 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 TRPV4Q9HBA0 871 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 RBAKQ9NYW8 714 aaPredicted RBP17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 TFIP11Q9UBB9 837 aaKnown RBP17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 ASB3Q9Y575 518 aa17.58■□□□□ 0.4
SNRPD3-204ENST00000439775 KIAA0391O15091 583 aaKnown RBP17.57■□□□□ 0.4
SNRPD3-204ENST00000439775 EXTL3O43909 919 aa17.57■□□□□ 0.4
SNRPD3-204ENST00000439775 ZSCAN22P10073 491 aaPredicted RBP17.57■□□□□ 0.4
SNRPD3-204ENST00000439775 MYL4P12829 197 aa17.57■□□□□ 0.4
SNRPD3-204ENST00000439775 WNT7BP56706 349 aa17.57■□□□□ 0.4
SNRPD3-204ENST00000439775 SHC4Q6S5L8 630 aa17.57■□□□□ 0.4
SNRPD3-204ENST00000439775 ZSWIM2Q8NEG5 633 aa17.57■□□□□ 0.4
SNRPD3-204ENST00000439775 SHKBP1Q8TBC3 707 aa17.57■□□□□ 0.4
SNRPD3-204ENST00000439775 KCNG4Q8TDN1 519 aa17.57■□□□□ 0.4
SNRPD3-204ENST00000439775 C2orf15Q8WU43 125 aaKnown RBP17.57■□□□□ 0.4
SNRPD3-204ENST00000439775 PSMG2Q969U7 264 aa17.57■□□□□ 0.4
SNRPD3-204ENST00000439775 BORCS6Q96GS4 357 aa17.57■□□□□ 0.4
SNRPD3-204ENST00000439775 CBWD1Q9BRT8 395 aa17.57■□□□□ 0.4
SNRPD3-204ENST00000439775 GPR88Q9GZN0 384 aa17.57■□□□□ 0.4
SNRPD3-204ENST00000439775 ZFHX2Q9C0A1 2572 aaPredicted RBP17.56■□□□□ 0.4
SNRPD3-204ENST00000439775 PRR23AA6NEV1 266 aa17.56■□□□□ 0.4
SNRPD3-204ENST00000439775 KPNA7A9QM74 516 aa17.56■□□□□ 0.4
SNRPD3-204ENST00000439775 PRPF6O94906 941 aaKnown RBP17.56■□□□□ 0.4
SNRPD3-204ENST00000439775 HSP90AA1P07900 732 aaKnown RBP17.56■□□□□ 0.4
SNRPD3-204ENST00000439775 GLULP15104 373 aa17.56■□□□□ 0.4
SNRPD3-204ENST00000439775 TFAMQ00059 246 aaKnown RBP17.56■□□□□ 0.4
SNRPD3-204ENST00000439775 AMPD3Q01432 767 aa17.56■□□□□ 0.4
SNRPD3-204ENST00000439775 SMARCB1Q12824 385 aa17.56■□□□□ 0.4
SNRPD3-204ENST00000439775 SLC39A12Q504Y0 691 aa17.56■□□□□ 0.4
SNRPD3-204ENST00000439775 FRMD5Q7Z6J6 570 aa17.56■□□□□ 0.4
SNRPD3-204ENST00000439775 THEM5Q8N1Q8 247 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms