RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 MLXIPLQ9NP71 852 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 KCNH4Q9UQ05 1017 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 NAALADL1Q9UQQ1 740 aa17.39■□□□□ 0.37
CLCNKA-203ENST00000439316 ATP2A1O14983 1001 aa17.38■□□□□ 0.37
CLCNKA-203ENST00000439316 PEX10O60683 326 aa17.38■□□□□ 0.37
CLCNKA-203ENST00000439316 DGAT1O75907 488 aa17.38■□□□□ 0.37
CLCNKA-203ENST00000439316 C4BPAP04003 597 aaKnown RBP17.38■□□□□ 0.37
CLCNKA-203ENST00000439316 NQO1P15559 274 aaKnown RBP17.38■□□□□ 0.37
CLCNKA-203ENST00000439316 ZNF268Q14587 947 aaPredicted RBP17.38■□□□□ 0.37
CLCNKA-203ENST00000439316 TDRD10Q5VZ19 366 aaKnown RBP17.38■□□□□ 0.37
CLCNKA-203ENST00000439316 NLRX1Q86UT6 975 aa17.38■□□□□ 0.37
CLCNKA-203ENST00000439316 RIBC1Q8N443 379 aaPredicted RBP17.38■□□□□ 0.37
CLCNKA-203ENST00000439316 EXD1Q8NHP7 514 aa17.38■□□□□ 0.37
CLCNKA-203ENST00000439316 GDAP1Q8TB36 358 aa17.38■□□□□ 0.37
CLCNKA-203ENST00000439316 TCP11Q8WWU5 503 aa17.38■□□□□ 0.37
CLCNKA-203ENST00000439316 VCPIP1Q96JH7 1222 aa17.38■□□□□ 0.37
CLCNKA-203ENST00000439316 MAGEB18Q96M61 343 aa17.38■□□□□ 0.37
CLCNKA-203ENST00000439316 TGS1Q96RS0 853 aaKnown RBP17.38■□□□□ 0.37
CLCNKA-203ENST00000439316 C11orf70Q9BRQ4 267 aa17.38■□□□□ 0.37
CLCNKA-203ENST00000439316 FOXP3Q9BZS1 431 aa17.38■□□□□ 0.37
CLCNKA-203ENST00000439316 ECT2Q9H8V3 914 aa17.38■□□□□ 0.37
CLCNKA-203ENST00000439316 NFASCO94856 1347 aa17.38■□□□□ 0.37
CLCNKA-203ENST00000439316 DKC1O60832 514 aaKnown RBP eCLIP17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 PIK3CAP42336 1068 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 WNT7BP56706 349 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 MAMLD1Q13495 774 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 LMBRD2Q68DH5 695 aaPredicted RBP17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 PLEKHA7Q6IQ23 1121 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 CGB2Q6NT52 195 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 ARHGEF18Q6ZSZ5 1173 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 CEP128Q6ZU80 1094 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 ANKS1BQ7Z6G8 1248 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 PHF13Q86YI8 300 aaPredicted RBP17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 ABRAQ8N0Z2 381 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 ZCCHC9Q8N567 271 aaKnown RBP17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 CXorf56Q9H5V9 222 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 MRPL47Q9HD33 250 aaKnown RBP17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 BAIAP2L1Q9UHR4 511 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 H0YCG3 227 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 CFHP08603 1231 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 CCND2P30279 289 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 STX2P32856 288 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 ABCD1P33897 745 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 GJA5P36382 358 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 COPS2P61201 443 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 BAATQ14032 418 aaPredicted RBP17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 TMEM63BQ5T3F8 832 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 PPP1R21Q6ZMI0 780 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 VSIG10LQ86VR7 867 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 SRRM1Q8IYB3 904 aaKnown RBP17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 GPATCH11Q8N954 259 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 GIMAP7Q8NHV1 300 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 SLC10A4Q96EP9 437 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 FAM118BQ9BPY3 351 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 CCDC77Q9BR77 488 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 ATP6V0A4Q9HBG4 840 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 NKIRAS1Q9NYS0 192 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 ADAM22Q9P0K1 906 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 GGT7Q9UJ14 662 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 SCINQ9Y6U3 715 aa17.37■□□□□ 0.37
CLCNKA-203ENST00000439316 VNN1O95497 513 aa17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 CLTAP09496 248 aa17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 ALADP13716 330 aa17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 KCNA2P16389 499 aa17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 KCNJ2P63252 427 aa17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 STRN3Q13033 797 aa17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 CUL2Q13617 745 aa17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 MOGSQ13724 837 aa17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 E2F5Q15329 346 aa17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 ZKSCAN8Q15776 578 aaPredicted RBP17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 SPOPLQ6IQ16 392 aa17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 MAML1Q92585 1016 aa17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 IFT74Q96LB3 600 aa17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 C9orf72Q96LT7 481 aa17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 FNBP1Q96RU3 617 aa17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 POLR3FQ9H1D9 316 aaPredicted RBP17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 RXFP1Q9HBX9 757 aa17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 APOBEC3GQ9HC16 384 aaKnown RBP17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 STYXL1Q9Y6J8 313 aa17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 PTPRJQ12913 1337 aa17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 SIP14410 1827 aa17.36■□□□□ 0.37
CLCNKA-203ENST00000439316 SOCS7O14512 581 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 CD58P19256 250 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 LIG4P49917 911 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 NLRP11P59045 1033 aaKnown RBP17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 C1QBPQ07021 282 aaKnown RBP17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 MTFR1Q15390 333 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 RNF43Q68DV7 783 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 PPP1R2P3Q6NXS1 205 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 LBX2Q6XYB7 198 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 PASD1Q8IV76 773 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 ZNF526Q8TF50 670 aaPredicted RBP17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 ASCC2Q9H1I8 757 aaPredicted RBP17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 NMRK2Q9NPI5 230 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 CYP26B1Q9NR63 512 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 BTBD7Q9P203 1132 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 TBK1Q9UHD2 729 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 SEPT9Q9UHD8 586 aaPredicted RBP17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 AGTPBP1Q9UPW5 1226 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 CNTN6Q9UQ52 1028 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms