RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 C22orf23Q9BZE7 217 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 BTBD1Q9H0C5 482 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 BHMT2Q9H2M3 363 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 ATP6V0A4Q9HBG4 840 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 ZNF287Q9HBT7 754 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 AKIP1Q9NQ31 210 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 CEP72Q9P209 647 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 USP25Q9UHP3 1055 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 KCNE5Q9UJ90 142 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 OGDHLQ9ULD0 1010 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 SLC45A2Q9UMX9 530 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 CCDC194A0A1B0GVG4 234 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 MYADML2A6NDP7 307 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 E7ENX8 843 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 MYO1FO00160 1098 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 POLRMTO00411 1230 aaKnown RBP4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 FAM20BO75063 409 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 PRSS23O95084 383 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 MAP4K4O95819 1239 aaPredicted RBP4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 NPR1P16066 1061 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 FGFR4P22455 802 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 PTGS2P35354 604 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 ARFIP2P53365 341 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 SATB1Q01826 763 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 TAP2Q03519 686 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 SLFN5Q08AF3 891 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 TCF15Q12870 199 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 FOXE3Q13461 319 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 LMBRD2Q68DH5 695 aaPredicted RBP4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 CLNKQ7Z7G1 428 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 COLGALT2Q8IYK4 626 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 CFAP52Q8N1V2 620 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 PDPRQ8NCN5 879 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 NT5C1BQ96P26 610 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 DPH1Q9BZG8 443 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 TINAGL1Q9GZM7 467 aaPredicted RBP4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 ZNF700Q9H0M5 742 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 GALNT9Q9HCQ5 603 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 TMEM74BQ9NUR3 256 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 TMX2Q9Y320 296 aa4.68□□□□□ -1.66
LSM1P1-201ENST00000438629 CCDC195A0A1B0GUA6 201 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 BTN3A1O00481 513 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 GRPP07492 148 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 CYP2C9P11712 490 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 FCER1AP12319 257 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 BRAFP15056 766 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 KCNA2P16389 499 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 SUMO3P55854 103 aaPredicted RBP4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 HSD11B2P80365 405 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 IFIT5Q13325 482 aaKnown RBP4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 RAB32Q13637 225 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 MAP9Q49MG5 647 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 TIGD2Q4W5G0 525 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 SWSAP1Q6NVH7 229 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 PCSK9Q8NBP7 692 aaKnown RBP4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 SH3RF3Q8TEJ3 882 aaPredicted RBP4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 HAS1Q92839 578 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 PHKBQ93100 1093 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 LENG9Q96B70 501 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 MYEOVQ96EZ4 313 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 TRIB1Q96RU8 372 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 STRBPQ96SI9 672 aaKnown RBP4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 NEU1Q99519 415 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 HEPHQ9BQS7 1158 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 ZNF518BQ9C0D4 1074 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 ZSCAN32Q9NX65 697 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 SRRDQ9UH36 339 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 AFF4Q9UHB7 1163 aaKnown RBP4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 FZD1Q9UP38 647 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 CDYLQ9Y232 598 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 FAM50BQ9Y247 325 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 USP19O94966 1318 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 SPATA31A3Q5VYP0 1347 aa4.67□□□□□ -1.66
LSM1P1-201ENST00000438629 RHPN2P1A8MT19 583 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 M0QYG6 137 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 PRRG2O14669 202 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 APAF1O14727 1248 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 NCR1O76036 304 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 UNC5CO95185 931 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 NDUFA10O95299 355 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 ABHD16AO95870 558 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 FOSP01100 380 aaPredicted RBP4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 PIM1P11309 404 aaPredicted RBP4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 ZKSCAN1P17029 563 aaPredicted RBP4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 DDX6P26196 483 aaKnown RBP eCLIP4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 RPS7P62081 194 aaKnown RBP4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 CXADRP78310 365 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 FMO1Q01740 532 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 OCA2Q04671 838 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 RESTQ13127 1097 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 SLC13A2Q13183 592 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 TUBA3CQ13748 450 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 BEAN1Q3B7T3 259 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 CRB2Q5IJ48 1285 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 MIIPQ5JXC2 388 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 TUBA3EQ6PEY2 450 aa4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.66□□□□□ -1.66
LSM1P1-201ENST00000438629 POC1BQ8TC44 478 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms