RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 GIPC1O14908 333 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 NVLO15381 856 aaKnown RBP7.03□□□□□ -1.28
CSDE1-205ENST00000438362 XPOTO43592 962 aaKnown RBP7.03□□□□□ -1.28
CSDE1-205ENST00000438362 SNX3O60493 162 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 GMNNO75496 209 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 SNHG28P0DPA3 235 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 CYP24A1Q07973 514 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 PTK7Q13308 1070 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 AUHQ13825 339 aaKnown RBP7.03□□□□□ -1.28
CSDE1-205ENST00000438362 MMEL1Q495T6 779 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 GPAT2Q6NUI2 795 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 XRRA1Q6P2D8 792 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 RFX8Q6ZV50 586 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 NLRP9Q7RTR0 991 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 ZFPM1Q8IX07 1006 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 C4orf19Q8IY42 314 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 MCOLN2Q8IZK6 566 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 NLRP7Q8WX94 980 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 ALG3Q92685 438 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 WRNIP1Q96S55 665 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 SERPINI1Q99574 410 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 LBHD1Q9BQE6 289 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-205ENST00000438362 APOL6Q9BWW8 343 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 SNX25Q9H3E2 840 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 KCNQ5Q9NR82 932 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 ZNF277Q9NRM2 450 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-205ENST00000438362 FBXO40Q9UH90 709 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 G3BP2Q9UN86 482 aaKnown RBP7.03□□□□□ -1.28
CSDE1-205ENST00000438362 MTO1Q9Y2Z2 717 aaKnown RBP7.03□□□□□ -1.28
CSDE1-205ENST00000438362 GOLGA8QA0A0J9YX86 632 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 GOLGA8OA6NCC3 632 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 GOLGA8NF8WBI6 632 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 HSPA4LO95757 839 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 MARCKSL1P49006 195 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 ELF3P78545 371 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-205ENST00000438362 KDSRQ06136 332 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 MTMR2Q13614 643 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 CNGA2Q16280 664 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 SUPT20HL1Q3ZLR7 823 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 TEX9Q8N6V9 391 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 CEP120Q8N960 986 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 LRRC57Q8N9N7 239 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 RNF149Q8NC42 400 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 SPATA18Q8TC71 538 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 STAMBPL1Q96FJ0 436 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 ZNF668Q96K58 619 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-205ENST00000438362 PPP1R16BQ96T49 567 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 CENPKQ9BS16 269 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 MANSC1Q9H8J5 431 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 ABCF3Q9NUQ8 709 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 KCPQ6ZWJ8 1503 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 KIF13AQ9H1H9 1805 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 KIF3CO14782 793 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 PPP1R11O60927 126 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-205ENST00000438362 SPAG6O75602 509 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 ENO1P06733 434 aaKnown RBP7.03□□□□□ -1.28
CSDE1-205ENST00000438362 APRTP07741 180 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 HOXA10P31260 410 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-205ENST00000438362 CTCFP49711 727 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-205ENST00000438362 STAT5BP51692 787 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 MRPS35P82673 323 aaKnown RBP7.03□□□□□ -1.28
CSDE1-205ENST00000438362 MCL1Q07820 350 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 MORF4L2Q15014 288 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 RPS6KA2Q15349 733 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 SMTNL2Q2TAL5 461 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 PREPLQ4J6C6 727 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-205ENST00000438362 EAPPQ56P03 285 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-205ENST00000438362 FSCBQ5H9T9 825 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 HEATR6Q6AI08 1181 aaKnown RBP7.03□□□□□ -1.28
CSDE1-205ENST00000438362 SLC9A9Q8IVB4 645 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 CDKL3Q8IVW4 592 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-205ENST00000438362 OR6B3Q8NGW1 331 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 PARD3BQ8TEW8 1205 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 NSL1Q96IY1 281 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 HSD17B14Q9BPX1 270 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 IDI2Q9BXS1 227 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 NIF3L1Q9GZT8 377 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 TMEM39BQ9GZU3 492 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 VPS11Q9H270 941 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 LRRC4Q9HBW1 653 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 CHST7Q9NS84 486 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 NINJ2Q9NZG7 142 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 EPS15L1Q9UBC2 864 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 ZC3H7BQ9UGR2 993 aaKnown RBP7.03□□□□□ -1.28
CSDE1-205ENST00000438362 L3MBTL1Q9Y468 752 aa7.03□□□□□ -1.28
CSDE1-205ENST00000438362 RGPD2P0DJD1 1756 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 ARFGEF2Q9Y6D5 1785 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 TISP43B9A030 160 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 CFLARO15519 480 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 KCNN4O15554 427 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 PSMD10O75832 226 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 PRKCBP05771 671 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 VIL1P09327 827 aaKnown RBP7.02□□□□□ -1.29
CSDE1-205ENST00000438362 MX2P20592 715 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 OSBPP22059 807 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 DLG4P78352 724 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 TNFAIP2Q03169 654 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 PRPSAP1Q14558 356 aa7.02□□□□□ -1.29
CSDE1-205ENST00000438362 RRP1BQ14684 758 aaKnown RBP7.02□□□□□ -1.29
CSDE1-205ENST00000438362 KCTD19Q17RG1 926 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms