RNA–Protein interactions for RNA: ENST00000438279.1

AC009541.1-201, humanhuman

BASIC

Gene AC009541.1, Length 2,662 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009541.1-201ENST00000438279 CAPN8A6NHC0 703 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 SOAT2O75908 522 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 FOSP01100 380 aaPredicted RBP3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 ADH4P08319 380 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 HMGB1P09429 215 aaKnown RBP3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 SCAPQ12770 1279 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 ARHGAP29Q52LW3 1261 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 ABHD17BQ5VST6 288 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 CYB5RLQ6IPT4 315 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 NPNTQ6UXI9 565 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 PPP1R32Q7Z5V6 425 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 C14orf80Q86SX3 495 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 PDPRQ8NCN5 879 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 POC1BQ8TC44 478 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 NACC2Q96BF6 587 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 MRGPRX1Q96LB2 322 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 CNPPD1Q9BV87 410 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 IMPG2Q9BZV3 1241 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 RSAD1Q9HA92 442 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 ETAA1Q9NY74 926 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 USP25Q9UHP3 1055 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 L1RE1Q9UN81 338 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 MED16Q9Y2X0 877 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 PCDHA1Q9Y5I3 950 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 SPATA31A3Q5VYP0 1347 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 COL4A3Q01955 1670 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 AATKQ6ZMQ8 1374 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 SPDEFO95238 335 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 ZBED1O96006 694 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 THP07101 528 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 ATF3P18847 181 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 GDF5P43026 501 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 VAV2P52735 878 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 HLTFQ14527 1009 aaKnown RBP eCLIP3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 PTPAQ15257 358 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 MAEAQ7L5Y9 396 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 SLC17A8Q8NDX2 589 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 KBTBD7Q8WVZ9 684 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 RNF31Q96EP0 1072 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 SMOQ99835 787 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 MLST8Q9BVC4 326 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 ALOXE3Q9BYJ1 711 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 DPH1Q9BZG8 443 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 TINAGL1Q9GZM7 467 aaPredicted RBP3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 CNNM1Q9NRU3 951 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 VSX1Q9NZR4 365 aaPredicted RBP3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 MAP3K2Q9Y2U5 619 aa3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 MTO1Q9Y2Z2 717 aaKnown RBP3.2□□□□□ -1.9
AC009541.1-201ENST00000438279 PRAMEF33A0A0G2JMD5 474 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 A6NNZ2 444 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 ZNF785A8K8V0 405 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 VSTM5A8MXK1 200 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 PHGDHO43175 533 aaKnown RBP3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 LPXNO60711 386 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 PRAMEF10O60809 474 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 AHSGP02765 367 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 GNAI2P04899 355 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 EGR2P11161 476 aaPredicted RBP3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 FDXRP22570 491 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 ZEB1P37275 1124 aaPredicted RBP3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 ANXA11P50995 505 aaKnown RBP3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 PSMC1P62191 440 aaKnown RBP3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 Q6ZPA2 131 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 CLNKQ7Z7G1 428 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 COLGALT2Q8IYK4 626 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 SH2D3CQ8N5H7 860 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 LARP4BQ92615 738 aaKnown RBP3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 TNPO1Q92973 898 aaKnown RBP3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 COQ10AQ96MF6 247 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 SERHL2Q9H4I8 314 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 PIH1D1Q9NWS0 290 aaKnown RBP3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 CDYLQ9Y232 598 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 KIF3BO15066 747 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 ZFPL1O95159 310 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 TGM1P22735 817 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 ZNF135P52742 658 aaPredicted RBP3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 ARFIP2P53365 341 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 SOX8P57073 446 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 TP53BP2Q13625 1128 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 HLXQ14774 488 aaPredicted RBP3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 CRB2Q5IJ48 1285 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 KHDC1LQ5JSQ8 128 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 USP37Q86T82 979 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 DGKHQ86XP1 1220 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 ANKS1AQ92625 1134 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 TRIM54Q9BYV2 358 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 UNKLQ9H9P5 680 aaKnown RBP3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 ATP6V0A4Q9HBG4 840 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 RGS17Q9UGC6 210 aaPredicted RBP3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 DDX20Q9UHI6 824 aaKnown RBP3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 PLEKHM1Q9Y4G2 1056 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 PAXBP1Q9Y5B6 917 aa3.19□□□□□ -1.9
AC009541.1-201ENST00000438279 GRID2IPA4D2P6 1211 aa3.18□□□□□ -1.9
AC009541.1-201ENST00000438279 TMEM191CA6NGB0 347 aa3.18□□□□□ -1.9
AC009541.1-201ENST00000438279 DNAJB5O75953 348 aa3.18□□□□□ -1.9
AC009541.1-201ENST00000438279 SUN1O94901 812 aa3.18□□□□□ -1.9
AC009541.1-201ENST00000438279 NPR1P16066 1061 aa3.18□□□□□ -1.9
AC009541.1-201ENST00000438279 HDCP19113 662 aa3.18□□□□□ -1.9
AC009541.1-201ENST00000438279 CACNB3P54284 484 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms