RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 SMOQ99835 787 aa4.4□□□□□ -1.71
HMGB1P31-201ENST00000437242 ZNF277Q9NRM2 450 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P31-201ENST00000437242 A0A0B4J269 797 aa4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 VWC2LB2RUY7 222 aa4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 TP73O15350 636 aa4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 SLC43A1O75387 559 aa4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 IGKV2-30P06310 120 aa4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 RHOP08100 348 aa4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 NR2F6P10588 404 aa4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 HOXB6P17509 224 aaKnown RBP4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 DRD4P21917 467 aa4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 EPHB2P29323 1055 aa4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 WASP42768 502 aa4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 CCT8P50990 548 aa4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 HNRNPMP52272 730 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 POU6F2P78424 691 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 SSBP2P81877 361 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 TUBB3Q13509 450 aa4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 KLF9Q13886 244 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 FLYWCH1Q4VC44 716 aa4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 SPATS2Q86XZ4 545 aaKnown RBP4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 SLC17A8Q8NDX2 589 aa4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 IL17RDQ8NFM7 739 aa4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 IFI44Q8TCB0 444 aa4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 RPL36ALQ969Q0 106 aaKnown RBP4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 ZBTB9Q96C00 473 aa4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 ALG8Q9BVK2 526 aa4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 SEMA4CQ9C0C4 833 aa4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 ADGRA2Q96PE1 1338 aa4.39□□□□□ -1.71
HMGB1P31-201ENST00000437242 GPR39O43194 453 aa4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 HNRNPCP07910 306 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 TFF2Q03403 129 aa4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 RAB39AQ14964 217 aa4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 CLUL1Q15846 466 aa4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 ETFDHQ16134 617 aa4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 PLAC9Q5JTB6 97 aa4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 C11orf87Q6NUJ2 197 aa4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 GADL1Q6ZQY3 521 aa4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 LHFPL2Q6ZUX7 228 aa4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 TMPRSS9Q7Z410 1059 aa4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 FBXO41Q8TF61 875 aa4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 COG1Q8WTW3 980 aa4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 SSH1Q8WYL5 1049 aa4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 HDAC10Q969S8 669 aa4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 TRIB1Q96RU8 372 aa4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 KRTAP1-5Q9BYS1 174 aa4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 TPSD1Q9BZJ3 242 aa4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 SERGEFQ9UGK8 458 aa4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 SLC45A2Q9UMX9 530 aa4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 PCDHA13Q9Y5I0 950 aa4.38□□□□□ -1.71
HMGB1P31-201ENST00000437242 TARM1B6A8C7 271 aa4.37□□□□□ -1.71
HMGB1P31-201ENST00000437242 F5H697 171 aa4.37□□□□□ -1.71
HMGB1P31-201ENST00000437242 CERS1P27544 350 aa4.37□□□□□ -1.71
HMGB1P31-201ENST00000437242 SLC16A1P53985 500 aa4.37□□□□□ -1.71
HMGB1P31-201ENST00000437242 ZNF280AP59817 542 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P31-201ENST00000437242 ERVK-21P61565 698 aa4.37□□□□□ -1.71
HMGB1P31-201ENST00000437242 MORN5Q5VZ52 161 aa4.37□□□□□ -1.71
HMGB1P31-201ENST00000437242 FAM9AQ8IZU1 332 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P31-201ENST00000437242 WDR66Q8TBY9 1149 aa4.37□□□□□ -1.71
HMGB1P31-201ENST00000437242 FKBP10Q96AY3 582 aa4.37□□□□□ -1.71
HMGB1P31-201ENST00000437242 LRIG1Q96JA1 1093 aa4.37□□□□□ -1.71
HMGB1P31-201ENST00000437242 EHD3Q9NZN3 535 aa4.37□□□□□ -1.71
HMGB1P31-201ENST00000437242 TBC1D30Q9Y2I9 924 aa4.37□□□□□ -1.71
HMGB1P31-201ENST00000437242 TBX22Q9Y458 520 aa4.37□□□□□ -1.71
HMGB1P31-201ENST00000437242 ZNF521Q96K83 1311 aa4.37□□□□□ -1.71
HMGB1P31-201ENST00000437242 POLRMTO00411 1230 aaKnown RBP4.36□□□□□ -1.71
HMGB1P31-201ENST00000437242 KCNAB3O43448 404 aa4.36□□□□□ -1.71
HMGB1P31-201ENST00000437242 TRIAP1O43715 76 aa4.36□□□□□ -1.71
HMGB1P31-201ENST00000437242 SGTAO43765 313 aa4.36□□□□□ -1.71
HMGB1P31-201ENST00000437242 EYA4O95677 639 aa4.36□□□□□ -1.71
HMGB1P31-201ENST00000437242 ANXA1P04083 346 aa4.36□□□□□ -1.71
HMGB1P31-201ENST00000437242 ZFXP17010 805 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P31-201ENST00000437242 CNGA1P29973 690 aa4.36□□□□□ -1.71
HMGB1P31-201ENST00000437242 NDUFV1P49821 464 aa4.36□□□□□ -1.71
HMGB1P31-201ENST00000437242 KLF1Q13351 362 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P31-201ENST00000437242 SLC44A4Q53GD3 710 aa4.36□□□□□ -1.71
HMGB1P31-201ENST00000437242 SLC9A4Q6AI14 798 aa4.36□□□□□ -1.71
HMGB1P31-201ENST00000437242 NEK8Q86SG6 692 aa4.36□□□□□ -1.71
HMGB1P31-201ENST00000437242 DENND1AQ8TEH3 1009 aa4.36□□□□□ -1.71
HMGB1P31-201ENST00000437242 RFKQ969G6 155 aa4.36□□□□□ -1.71
HMGB1P31-201ENST00000437242 ZNF48Q96MX3 618 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P31-201ENST00000437242 ACTRT3Q9BYD9 372 aa4.36□□□□□ -1.71
HMGB1P31-201ENST00000437242 BHMT2Q9H2M3 363 aa4.36□□□□□ -1.71
HMGB1P31-201ENST00000437242 SPATA31A3Q5VYP0 1347 aa4.36□□□□□ -1.71
HMGB1P31-201ENST00000437242 E9PLN8 166 aa4.35□□□□□ -1.71
HMGB1P31-201ENST00000437242 NDUFB7P17568 137 aa4.35□□□□□ -1.71
HMGB1P31-201ENST00000437242 MPGP29372 298 aa4.35□□□□□ -1.71
HMGB1P31-201ENST00000437242 CCT4P50991 539 aaKnown RBP4.35□□□□□ -1.71
HMGB1P31-201ENST00000437242 BMPR2Q13873 1038 aa4.35□□□□□ -1.71
HMGB1P31-201ENST00000437242 CEP85Q6P2H3 762 aa4.35□□□□□ -1.71
HMGB1P31-201ENST00000437242 SLC30A10Q6XR72 485 aa4.35□□□□□ -1.71
HMGB1P31-201ENST00000437242 ZNF66Q6ZN08 573 aa4.35□□□□□ -1.71
HMGB1P31-201ENST00000437242 ZNF551Q7Z340 670 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P31-201ENST00000437242 YTHDF3Q7Z739 585 aaKnown RBP4.35□□□□□ -1.71
HMGB1P31-201ENST00000437242 NOP9Q86U38 636 aaKnown RBP4.35□□□□□ -1.71
HMGB1P31-201ENST00000437242 POC1BQ8TC44 478 aa4.35□□□□□ -1.71
HMGB1P31-201ENST00000437242 OSBPL9Q96SU4 736 aa4.35□□□□□ -1.71
HMGB1P31-201ENST00000437242 VKORC1Q9BQB6 163 aa4.35□□□□□ -1.71
HMGB1P31-201ENST00000437242 SH3BP4Q9P0V3 963 aa4.35□□□□□ -1.71
HMGB1P31-201ENST00000437242 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms