RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 RCN2Q14257 317 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 MTHFD1LQ6UB35 978 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 C4orf22Q6V702 233 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 SZRD1Q7Z422 152 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 ZC3H18Q86VM9 953 aaKnown RBP16.41■□□□□ 0.22
NEDD4-202ENST00000435532 TRIM59Q8IWR1 403 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 ATP11CQ8NB49 1132 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 HPS5Q9UPZ3 1129 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.41■□□□□ 0.22
NEDD4-202ENST00000435532 F9P00740 461 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 CKBP12277 381 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.4■□□□□ 0.22
NEDD4-202ENST00000435532 MFN1Q8IWA4 741 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 TSPAN17Q96FV3 270 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 GOLGA8MH3BSY2 632 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 MAP3K13O43283 966 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 CTIFO43310 598 aaKnown RBP16.4■□□□□ 0.22
NEDD4-202ENST00000435532 SLCO1A2P46721 670 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 RBBP7Q16576 425 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 WDR18Q9BV38 432 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 RANBP17Q9H2T7 1088 aaKnown RBP16.4■□□□□ 0.22
NEDD4-202ENST00000435532 CLCA2Q9UQC9 943 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 MAPTP10636 758 aaKnown RBP16.4■□□□□ 0.22
NEDD4-202ENST00000435532 TWF1Q12792 350 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 CCDC197Q8NCU1 140 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 CYP3A43Q9HB55 503 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 KCNQ5Q9NR82 932 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 STK38LQ9Y2H1 464 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 UBR1Q8IWV7 1749 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 SYNCRIPO60506 623 aaKnown RBP16.4■□□□□ 0.22
NEDD4-202ENST00000435532 ETFBP38117 255 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 CDR2Q01850 454 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 POU5F1BQ06416 359 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 WASHC5Q12768 1159 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 EMBQ6PCB8 327 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 DDX4Q9NQI0 724 aaKnown RBP16.4■□□□□ 0.22
NEDD4-202ENST00000435532 UXTQ9UBK9 157 aaPredicted RBP16.4■□□□□ 0.22
NEDD4-202ENST00000435532 SLC27A1Q6PCB7 646 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 ACAD11Q709F0 780 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 OOSP2Q86WS3 158 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 RSAD1Q9HA92 442 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 PCDHB5Q9Y5E4 795 aa16.4■□□□□ 0.22
NEDD4-202ENST00000435532 ATP9BO43861 1147 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 DHX34Q14147 1143 aaKnown RBP16.39■□□□□ 0.21
NEDD4-202ENST00000435532 LBRQ14739 615 aaKnown RBP16.39■□□□□ 0.21
NEDD4-202ENST00000435532 TBC1D1Q86TI0 1168 aaPredicted RBP16.39■□□□□ 0.21
NEDD4-202ENST00000435532 SPATA16Q9BXB7 569 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 DNAJC17Q9NVM6 304 aaKnown RBP16.39■□□□□ 0.21
NEDD4-202ENST00000435532 TTC7AQ9ULT0 858 aaPredicted RBP16.39■□□□□ 0.21
NEDD4-202ENST00000435532 FAM50BQ9Y247 325 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 MED24O75448 989 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 GHRP10912 638 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 ZNF211Q13398 564 aaPredicted RBP16.39■□□□□ 0.21
NEDD4-202ENST00000435532 WDCPQ9H6R7 721 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 GTSE1Q9NYZ3 720 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 ANP32DO95626 131 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 MYL4P12829 197 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 BCAT1P54687 386 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 IL1RL1Q01638 556 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 STK4Q13043 487 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 SEC23AQ15436 765 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 ANKRD23Q86SG2 305 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 NSMCE4AQ9NXX6 385 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 NDUFS3O75489 264 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 ACADMP11310 421 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 EIF2B5Q13144 721 aaKnown RBP16.39■□□□□ 0.21
NEDD4-202ENST00000435532 UGP2Q16851 508 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 ANKRD20A4Q4UJ75 823 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 ANKRD20A8PQ5CZ79 823 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 PPM1LQ5SGD2 360 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 ANKRD20A2Q5SQ80 823 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 ANKRD20A1Q5TYW2 823 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 KSR1Q8IVT5 923 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 SERPINI1Q99574 410 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 NCF2P19878 526 aaPredicted RBP16.39■□□□□ 0.21
NEDD4-202ENST00000435532 GUCY2CP25092 1073 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 ADCYAP1R1P41586 468 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 PDIA2Q13087 525 aaKnown RBP16.39■□□□□ 0.21
NEDD4-202ENST00000435532 CDR2LQ86X02 465 aaPredicted RBP16.39■□□□□ 0.21
NEDD4-202ENST00000435532 WDR75Q8IWA0 830 aaKnown RBP16.39■□□□□ 0.21
NEDD4-202ENST00000435532 SLC30A5Q8TAD4 765 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 CALML6Q8TD86 181 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 FBXL21Q9UKT6 434 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 NFU1Q9UMS0 254 aa16.39■□□□□ 0.21
NEDD4-202ENST00000435532 SSU72P8A0A1W2PR75 194 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 GRB10Q13322 594 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 GPR142Q7Z601 462 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 PPM1NQ8N819 430 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 TMC2Q8TDI7 906 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 CCDC124Q96CT7 223 aaKnown RBP16.38■□□□□ 0.21
NEDD4-202ENST00000435532 CYP4F11Q9HBI6 524 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 TLR8Q9NR97 1041 aaKnown RBP16.38■□□□□ 0.21
NEDD4-202ENST00000435532 TMEM51Q9NW97 253 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 MROH1Q8NDA8 1641 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 IRF6O14896 467 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 ADGRB2O60241 1585 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 ATL2Q8NHH9 583 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 USP33Q8TEY7 942 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 GPR63Q9BZJ6 419 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 ITM2BQ9Y287 266 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms