RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 LLGL2Q6P1M3 1020 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 OLFML1Q6UWY5 402 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 TSHZ1Q6ZSZ6 1077 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 ACAD11Q709F0 780 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 OLIG1Q8TAK6 271 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 REEP2Q9BRK0 252 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 KLHL11Q9NVR0 708 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 CCDC195A0A1B0GUA6 201 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 ETS1P14921 441 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 MUTP22033 750 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 NMT1P30419 496 aaKnown RBP7.86□□□□□ -1.15
CPSF6-202ENST00000435070 TMEM259Q4ZIN3 620 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 ZBTB46Q86UZ6 589 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 HAS1Q92839 578 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 USTQ9Y2C2 406 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 AK5Q9Y6K8 562 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 CAPN8A6NHC0 703 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 VILLO15195 856 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 FOXD2O60548 495 aaPredicted RBP7.85□□□□□ -1.15
CPSF6-202ENST00000435070 MED24O75448 989 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 SLC25A3Q00325 362 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 MAP3K10Q02779 954 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 MAP7D1Q3KQU3 841 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 EPC2Q52LR7 807 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 C3orf67Q6ZVT6 689 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 DPH6Q7L8W6 267 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 GLIS1Q8NBF1 620 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 GDPD5Q8WTR4 605 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 TSNARE1Q96NA8 513 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 INTS2Q9H0H0 1204 aaKnown RBP7.85□□□□□ -1.15
CPSF6-202ENST00000435070 DDX43Q9NXZ2 648 aaKnown RBP7.85□□□□□ -1.15
CPSF6-202ENST00000435070 BCL9O00512 1426 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 C15orf38-AP3S2A0A0A6YYH1 394 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.85□□□□□ -1.15
CPSF6-202ENST00000435070 RXRBP28702 533 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 IL6STP40189 918 aaPredicted RBP7.85□□□□□ -1.15
CPSF6-202ENST00000435070 GJA8P48165 433 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 FMO5P49326 533 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 CDK16Q00536 496 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 PDIA2Q13087 525 aaKnown RBP7.85□□□□□ -1.15
CPSF6-202ENST00000435070 CLUL1Q15846 466 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 SYDE2Q5VT97 1194 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 ARPINQ7Z6K5 226 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 ZFP28Q8NHY6 868 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 ZCRB1Q8TBF4 217 aaKnown RBP7.85□□□□□ -1.15
CPSF6-202ENST00000435070 PRPF18Q99633 342 aaKnown RBP7.85□□□□□ -1.15
CPSF6-202ENST00000435070 WNT8AQ9H1J5 351 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 INIPQ9NRY2 104 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 IL1RAPL1Q9NZN1 696 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 SMG5Q9UPR3 1016 aaKnown RBP7.85□□□□□ -1.15
CPSF6-202ENST00000435070 UBAP1LF5GYI3 381 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 EDIL3O43854 480 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 HNRNPCL1O60812 293 aaKnown RBP7.85□□□□□ -1.15
CPSF6-202ENST00000435070 ADCY7P51828 1080 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 RAB3IL1Q8TBN0 382 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 GAB3Q8WWW8 586 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 ABHD8Q96I13 439 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 MRPL1Q9BYD6 325 aaKnown RBP7.85□□□□□ -1.15
CPSF6-202ENST00000435070 PTTG2Q9NZH5 202 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 ZBTB1Q9Y2K1 713 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 NEU2Q9Y3R4 380 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 SMIM31A0A1B0GVY4 71 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 SGPL1O95470 568 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 PAX3P23760 479 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 GCAP28676 217 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 CRABP2P29373 138 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 NAA20P61599 178 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 PRPF39Q86UA1 669 aaKnown RBP7.85□□□□□ -1.15
CPSF6-202ENST00000435070 OXNAD1Q96HP4 312 aaPredicted RBP7.85□□□□□ -1.15
CPSF6-202ENST00000435070 FAM111AQ96PZ2 611 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 PCDHB18PQ96TA0 734 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 LRRC19Q9H756 370 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 HEY1Q9Y5J3 304 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 USP17L5A8MUK1 530 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 UQCRBP14927 111 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 SSTR1P30872 391 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 SERPINB8P50452 374 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 ZNF200P98182 395 aaPredicted RBP7.85□□□□□ -1.15
CPSF6-202ENST00000435070 TBC1D10BQ4KMP7 808 aaPredicted RBP7.85□□□□□ -1.15
CPSF6-202ENST00000435070 CCDC92Q53HC0 331 aaPredicted RBP7.85□□□□□ -1.15
CPSF6-202ENST00000435070 CLEC10AQ8IUN9 316 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 RIN3Q8TB24 985 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 MORC4Q8TE76 937 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 CNBD2Q96M20 576 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 CORO1BQ9BR76 489 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 SPATA7Q9P0W8 599 aa7.85□□□□□ -1.15
CPSF6-202ENST00000435070 PARP4Q9UKK3 1724 aaKnown RBP7.84□□□□□ -1.15
CPSF6-202ENST00000435070 TMEM221A6NGB7 291 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 A8MXQ7 604 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 SPECC1L-ADORA2AF8WAN1 911 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 GGPS1O95749 300 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 RALAP11233 206 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 KLRK1P26718 216 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 MSLNQ13421 630 aaPredicted RBP7.84□□□□□ -1.15
CPSF6-202ENST00000435070 C16orf72Q14CZ0 275 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 TMEM110Q86TL2 294 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 ARID3BQ8IVW6 561 aaPredicted RBP7.84□□□□□ -1.15
CPSF6-202ENST00000435070 MAPKAPK5Q8IW41 473 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 LZTS2Q9BRK4 669 aa7.84□□□□□ -1.15
CPSF6-202ENST00000435070 BHMT2Q9H2M3 363 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms