RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 ANAPC7Q9UJX3 599 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 TNFSF13BQ9Y275 285 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 PTPN22Q9Y2R2 807 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 COL1A2P08123 1366 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 GOLGA6L10A6NI86 522 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 INO80B-WBP1J3KQ70 363 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 ABLIM1O14639 778 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 THAP12O43422 761 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 LSM8O95777 96 aaKnown RBP13.66□□□□□ -0.22
DDX56-204ENST00000431640 CST3P01034 146 aaPredicted RBP13.66□□□□□ -0.22
DDX56-204ENST00000431640 TMEM191BP0C7N4 346 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 AKR1A1P14550 325 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 TMOD1P28289 359 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 ECHS1P30084 290 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 GRK4P32298 578 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 ACTN2P35609 894 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 PHKA2P46019 1235 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 LBX1P52954 281 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 BEX3Q00994 111 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 TRADDQ15628 312 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 TMEM132AQ24JP5 1023 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 NAA35Q5VZE5 725 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 DUPD1Q68J44 220 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 MON1BQ7L1V2 547 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 IFNLR1Q8IU57 520 aaPredicted RBP13.66□□□□□ -0.22
DDX56-204ENST00000431640 UBR7Q8N806 425 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 RIN2Q8WYP3 895 aaPredicted RBP13.66□□□□□ -0.22
DDX56-204ENST00000431640 INO80BQ9C086 356 aaPredicted RBP13.66□□□□□ -0.22
DDX56-204ENST00000431640 ZNF518BQ9C0D4 1074 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 ADAM22Q9P0K1 906 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 FEZ2Q9UHY8 353 aaPredicted RBP13.66□□□□□ -0.22
DDX56-204ENST00000431640 DNAH12Q6ZR08 3092 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 FSCN2O14926 492 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 SEPT4O43236 478 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 DYNC1LI2O43237 492 aaPredicted RBP13.65□□□□□ -0.22
DDX56-204ENST00000431640 PPFIA4O75335 1185 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 RPS6KA5O75582 802 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 PROSCO94903 275 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 LGALS2P05162 132 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 RRM1P23921 792 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 MAN1A1P33908 653 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 TNFSF9P41273 254 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 FNTAP49354 379 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 ZNF132P52740 706 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 NOMO3P69849 1222 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 ZNF568Q3ZCX4 644 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 SEZ6Q53EL9 994 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 PRELID2Q8N945 189 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 C12orf50Q8NA57 414 aaPredicted RBP13.65□□□□□ -0.22
DDX56-204ENST00000431640 SLAIN1Q8ND83 568 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.65□□□□□ -0.22
DDX56-204ENST00000431640 PPP1R13LQ8WUF5 828 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 ZNF606Q8WXB4 792 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 ELMO3Q96BJ8 720 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 FAM212AQ96EL1 285 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 BTBD6Q96KE9 485 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 NLRP4Q96MN2 994 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 CELF4Q9BZC1 486 aaKnown RBP13.65□□□□□ -0.22
DDX56-204ENST00000431640 NIF3L1Q9GZT8 377 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 RPF1Q9H9Y2 349 aaKnown RBP13.65□□□□□ -0.22
DDX56-204ENST00000431640 HOMER3Q9NSC5 361 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 PARVAQ9NVD7 372 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 CHORDC1Q9UHD1 332 aaPredicted RBP13.65□□□□□ -0.22
DDX56-204ENST00000431640 PRDM4Q9UKN5 801 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 NR2E1Q9Y466 385 aa13.65□□□□□ -0.22
DDX56-204ENST00000431640 TTLL13PA6NNM8 815 aa13.64□□□□□ -0.23
DDX56-204ENST00000431640 ADAMTS4O75173 837 aa13.64□□□□□ -0.23
DDX56-204ENST00000431640 C22orf31O95567 290 aa13.64□□□□□ -0.23
DDX56-204ENST00000431640 PGK1P00558 417 aa13.64□□□□□ -0.23
DDX56-204ENST00000431640 CALB1P05937 261 aa13.64□□□□□ -0.23
DDX56-204ENST00000431640 IVLP07476 585 aa13.64□□□□□ -0.23
DDX56-204ENST00000431640 INSRRP14616 1297 aa13.64□□□□□ -0.23
DDX56-204ENST00000431640 CETN2P41208 172 aa13.64□□□□□ -0.23
DDX56-204ENST00000431640 PTGIRP43119 386 aa13.64□□□□□ -0.23
DDX56-204ENST00000431640 PRMT2P55345 433 aa13.64□□□□□ -0.23
DDX56-204ENST00000431640 MBTD1Q05BQ5 628 aa13.64□□□□□ -0.23
DDX56-204ENST00000431640 PLEKHA7Q6IQ23 1121 aa13.64□□□□□ -0.23
DDX56-204ENST00000431640 CCDC137Q6PK04 289 aaKnown RBP13.64□□□□□ -0.23
DDX56-204ENST00000431640 RUFY4Q6ZNE9 571 aa13.64□□□□□ -0.23
DDX56-204ENST00000431640 ADAT2Q7Z6V5 191 aaKnown RBP13.64□□□□□ -0.23
DDX56-204ENST00000431640 DDX42Q86XP3 938 aaKnown RBP eCLIP13.64□□□□□ -0.23
DDX56-204ENST00000431640 JAMLQ86YT9 394 aa13.64□□□□□ -0.23
DDX56-204ENST00000431640 PIK3R5Q8WYR1 880 aa13.64□□□□□ -0.23
DDX56-204ENST00000431640 C16orf70Q9BSU1 422 aa13.64□□□□□ -0.23
DDX56-204ENST00000431640 UPF3AQ9H1J1 476 aaKnown RBP13.64□□□□□ -0.23
DDX56-204ENST00000431640 LRRC19Q9H756 370 aa13.64□□□□□ -0.23
DDX56-204ENST00000431640 ERVK-5Q9HDB9 667 aa13.64□□□□□ -0.23
DDX56-204ENST00000431640 CWC15Q9P013 229 aaKnown RBP13.64□□□□□ -0.23
DDX56-204ENST00000431640 CALCOCO1Q9P1Z2 691 aa13.64□□□□□ -0.23
DDX56-204ENST00000431640 MROH7Q68CQ1 1323 aa13.64□□□□□ -0.23
DDX56-204ENST00000431640 A6NJR5 290 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 HMGB1P1B2RPK0 211 aaPredicted RBP13.63□□□□□ -0.23
DDX56-204ENST00000431640 PSTPIP1O43586 416 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 MCF2P10911 925 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 HSD17B3P37058 310 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 COILP38432 576 aaPredicted RBP13.63□□□□□ -0.23
DDX56-204ENST00000431640 MARCKSL1P49006 195 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 MYL6P60660 151 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 TFAMQ00059 246 aaKnown RBP13.63□□□□□ -0.23
DDX56-204ENST00000431640 TAP1Q03518 808 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms