RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 LNX1Q8TBB1 728 aaPredicted RBP16.44■□□□□ 0.22
PTCD1-204ENST00000430982 DLGAP2Q9P1A6 1054 aa16.44■□□□□ 0.22
PTCD1-204ENST00000430982 FNIP2Q9P278 1114 aa16.44■□□□□ 0.22
PTCD1-204ENST00000430982 IGSF9Q9P2J2 1179 aa16.44■□□□□ 0.22
PTCD1-204ENST00000430982 CGNQ9P2M7 1197 aaKnown RBP16.44■□□□□ 0.22
PTCD1-204ENST00000430982 HOOK1Q9UJC3 728 aaKnown RBP16.44■□□□□ 0.22
PTCD1-204ENST00000430982 CITO14578 2027 aa16.44■□□□□ 0.22
PTCD1-204ENST00000430982 KINO60870 393 aaKnown RBP16.43■□□□□ 0.22
PTCD1-204ENST00000430982 KIF20AO95235 890 aa16.43■□□□□ 0.22
PTCD1-204ENST00000430982 SMC2O95347 1197 aa16.43■□□□□ 0.22
PTCD1-204ENST00000430982 C9orf57Q5W0N0 161 aa16.43■□□□□ 0.22
PTCD1-204ENST00000430982 DSTYKQ6XUX3 929 aa16.43■□□□□ 0.22
PTCD1-204ENST00000430982 C15orf39Q6ZRI6 1047 aa16.43■□□□□ 0.22
PTCD1-204ENST00000430982 NT5DC4Q86YG4 428 aa16.43■□□□□ 0.22
PTCD1-204ENST00000430982 XXYLT1Q8NBI6 393 aa16.43■□□□□ 0.22
PTCD1-204ENST00000430982 RDH13Q8NBN7 331 aa16.43■□□□□ 0.22
PTCD1-204ENST00000430982 GOLGA5Q8TBA6 731 aa16.43■□□□□ 0.22
PTCD1-204ENST00000430982 SUSD3Q96L08 255 aa16.43■□□□□ 0.22
PTCD1-204ENST00000430982 TIGD1Q96MW7 591 aa16.43■□□□□ 0.22
PTCD1-204ENST00000430982 CLSTN3Q9BQT9 956 aa16.43■□□□□ 0.22
PTCD1-204ENST00000430982 KIAA1586Q9HCI6 787 aa16.43■□□□□ 0.22
PTCD1-204ENST00000430982 PDE11AQ9HCR9 933 aa16.43■□□□□ 0.22
PTCD1-204ENST00000430982 MAN1C1Q9NR34 630 aa16.43■□□□□ 0.22
PTCD1-204ENST00000430982 DPP3Q9NY33 737 aa16.43■□□□□ 0.22
PTCD1-204ENST00000430982 MAPK8IP1Q9UQF2 711 aa16.43■□□□□ 0.22
PTCD1-204ENST00000430982 R4GN57 208 aa16.43■□□□□ 0.22
PTCD1-204ENST00000430982 GPR179Q6PRD1 2367 aa16.43■□□□□ 0.22
PTCD1-204ENST00000430982 TRIP11Q15643 1979 aa16.42■□□□□ 0.22
PTCD1-204ENST00000430982 SYN3O14994 580 aa16.42■□□□□ 0.22
PTCD1-204ENST00000430982 NARSO43776 548 aaKnown RBP16.42■□□□□ 0.22
PTCD1-204ENST00000430982 EXOC3O60645 756 aa16.42■□□□□ 0.22
PTCD1-204ENST00000430982 N4BP1O75113 896 aaKnown RBP16.42■□□□□ 0.22
PTCD1-204ENST00000430982 KRT37O76014 449 aa16.42■□□□□ 0.22
PTCD1-204ENST00000430982 SPATA31D3P0C874 917 aa16.42■□□□□ 0.22
PTCD1-204ENST00000430982 SURF1Q15526 300 aa16.42■□□□□ 0.22
PTCD1-204ENST00000430982 VARS2Q5ST30 1063 aaKnown RBP16.42■□□□□ 0.22
PTCD1-204ENST00000430982 LMBRD2Q68DH5 695 aaPredicted RBP16.42■□□□□ 0.22
PTCD1-204ENST00000430982 SPATA31D4Q6ZUB0 917 aa16.42■□□□□ 0.22
PTCD1-204ENST00000430982 ANKS3Q6ZW76 656 aa16.42■□□□□ 0.22
PTCD1-204ENST00000430982 APPL2Q8NEU8 664 aa16.42■□□□□ 0.22
PTCD1-204ENST00000430982 CACTINQ8WUQ7 758 aaKnown RBP16.42■□□□□ 0.22
PTCD1-204ENST00000430982 ERCC4Q92889 916 aaPredicted RBP16.42■□□□□ 0.22
PTCD1-204ENST00000430982 FAM84AQ96KN4 292 aa16.42■□□□□ 0.22
PTCD1-204ENST00000430982 CNTNAP3BQ96NU0 1288 aa16.42■□□□□ 0.22
PTCD1-204ENST00000430982 RHOBTB2Q9BYZ6 727 aa16.42■□□□□ 0.22
PTCD1-204ENST00000430982 CNTNAP3Q9BZ76 1288 aa16.42■□□□□ 0.22
PTCD1-204ENST00000430982 RMND1Q9NWS8 449 aa16.42■□□□□ 0.22
PTCD1-204ENST00000430982 MTRRQ9UBK8 725 aa16.42■□□□□ 0.22
PTCD1-204ENST00000430982 FBXL21Q9UKT6 434 aa16.42■□□□□ 0.22
PTCD1-204ENST00000430982 PCDHB8Q9UN66 801 aa16.42■□□□□ 0.22
PTCD1-204ENST00000430982 H7C4K7 107 aa16.41■□□□□ 0.22
PTCD1-204ENST00000430982 PIRO00625 290 aa16.41■□□□□ 0.22
PTCD1-204ENST00000430982 ADAM12O43184 909 aa16.41■□□□□ 0.22
PTCD1-204ENST00000430982 TGM5O43548 720 aa16.41■□□□□ 0.22
PTCD1-204ENST00000430982 CALUO43852 315 aaPredicted RBP16.41■□□□□ 0.22
PTCD1-204ENST00000430982 PRPF40AO75400 957 aaKnown RBP16.41■□□□□ 0.22
PTCD1-204ENST00000430982 TMEM191BP0C7N4 346 aa16.41■□□□□ 0.22
PTCD1-204ENST00000430982 UBE2HP62256 183 aa16.41■□□□□ 0.22
PTCD1-204ENST00000430982 SNRNP35Q16560 246 aaKnown RBP16.41■□□□□ 0.22
PTCD1-204ENST00000430982 ELMSAN1Q6PJG2 1045 aa16.41■□□□□ 0.22
PTCD1-204ENST00000430982 C12orf56Q8IXR9 622 aa16.41■□□□□ 0.22
PTCD1-204ENST00000430982 RUBCNQ92622 972 aa16.41■□□□□ 0.22
PTCD1-204ENST00000430982 SMARCE1Q969G3 411 aa16.41■□□□□ 0.22
PTCD1-204ENST00000430982 IPO9Q96P70 1041 aaKnown RBP16.41■□□□□ 0.22
PTCD1-204ENST00000430982 KCTD10Q9H3F6 313 aa16.41■□□□□ 0.22
PTCD1-204ENST00000430982 BACE2Q9Y5Z0 518 aa16.41■□□□□ 0.22
PTCD1-204ENST00000430982 CDY1Q9Y6F8 540 aa16.41■□□□□ 0.22
PTCD1-204ENST00000430982 ANO9A1A5B4 782 aa16.4■□□□□ 0.22
PTCD1-204ENST00000430982 PDXKO00764 312 aa16.4■□□□□ 0.22
PTCD1-204ENST00000430982 PAPLNO95428 1278 aa16.4■□□□□ 0.22
PTCD1-204ENST00000430982 POLR2BP30876 1174 aaKnown RBP16.4■□□□□ 0.22
PTCD1-204ENST00000430982 OR1D2P34982 312 aa16.4■□□□□ 0.22
PTCD1-204ENST00000430982 ARPP19P56211 112 aa16.4■□□□□ 0.22
PTCD1-204ENST00000430982 LILRA4P59901 499 aa16.4■□□□□ 0.22
PTCD1-204ENST00000430982 CTXN3Q4LDR2 81 aa16.4■□□□□ 0.22
PTCD1-204ENST00000430982 PHLDB3Q6NSJ2 640 aa16.4■□□□□ 0.22
PTCD1-204ENST00000430982 ZC3H14Q6PJT7 736 aaKnown RBP16.4■□□□□ 0.22
PTCD1-204ENST00000430982 SMYD4Q8IYR2 804 aaPredicted RBP16.4■□□□□ 0.22
PTCD1-204ENST00000430982 SUMF1Q8NBK3 374 aa16.4■□□□□ 0.22
PTCD1-204ENST00000430982 CMASQ8NFW8 434 aaPredicted RBP16.4■□□□□ 0.22
PTCD1-204ENST00000430982 CCDC127Q96BQ5 260 aa16.4■□□□□ 0.22
PTCD1-204ENST00000430982 ANKRD36BP1Q96IX9 119 aa16.4■□□□□ 0.22
PTCD1-204ENST00000430982 MTMR12Q9C0I1 747 aa16.4■□□□□ 0.22
PTCD1-204ENST00000430982 EPS15L1Q9UBC2 864 aa16.4■□□□□ 0.22
PTCD1-204ENST00000430982 DPP7Q9UHL4 492 aa16.4■□□□□ 0.22
PTCD1-204ENST00000430982 PCDHA5Q9Y5H7 936 aa16.4■□□□□ 0.22
PTCD1-204ENST00000430982 TIMM13Q9Y5L4 95 aaPredicted RBP16.4■□□□□ 0.22
PTCD1-204ENST00000430982 DOCK8Q8NF50 2099 aa16.4■□□□□ 0.22
PTCD1-204ENST00000430982 M0QZQ0 153 aa16.39■□□□□ 0.21
PTCD1-204ENST00000430982 SPTLC1O15269 473 aa16.39■□□□□ 0.21
PTCD1-204ENST00000430982 TNNC2P02585 160 aa16.39■□□□□ 0.21
PTCD1-204ENST00000430982 NR3C1P04150 777 aa16.39■□□□□ 0.21
PTCD1-204ENST00000430982 ITGB3P05106 788 aa16.39■□□□□ 0.21
PTCD1-204ENST00000430982 KRT19P08727 400 aa16.39■□□□□ 0.21
PTCD1-204ENST00000430982 SP9P0CG40 484 aa16.39■□□□□ 0.21
PTCD1-204ENST00000430982 DLATP10515 647 aaKnown RBP16.39■□□□□ 0.21
PTCD1-204ENST00000430982 ODC1P11926 461 aa16.39■□□□□ 0.21
PTCD1-204ENST00000430982 AARSP49588 968 aaKnown RBP eCLIP16.39■□□□□ 0.21
PTCD1-204ENST00000430982 TAF6P49848 677 aa16.39■□□□□ 0.21
PTCD1-204ENST00000430982 CYP24A1Q07973 514 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms