RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 AP3B1O00203 1094 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 GAS7O60861 476 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 FARP2O94887 1054 aaPredicted RBP7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 ATF7P17544 494 aaPredicted RBP7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 ALDH5A1P51649 535 aaPredicted RBP7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 HNRNPFP52597 415 aaKnown RBP7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 YARSP54577 528 aaKnown RBP7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 SPANXN2Q5MJ10 180 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 TMCO4Q5TGY1 634 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 TNIP3Q96KP6 325 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 BCL7BQ9BQE9 202 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 IRX2Q9BZI1 471 aaPredicted RBP7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 CD320Q9NPF0 282 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 SOX13Q9UN79 622 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 FAM172BPA6NC97 362 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 DDX39AO00148 427 aaKnown RBP7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 MED26O95402 600 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 ABHD2P08910 425 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 BRAFP15056 766 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 ZNF18P17022 549 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 GEMIN4P57678 1058 aaKnown RBP7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 CDK18Q07002 472 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 ERAP2Q6P179 960 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 DNAJC10Q8IXB1 793 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 CCDC36Q8IYA8 594 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 NAT14Q8WUY8 206 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 OMA1Q96E52 524 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 CEP95Q96GE4 821 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 YTHDF1Q9BYJ9 559 aaKnown RBP7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 PKD2L1Q9P0L9 805 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 TUBGCP6Q96RT7 1819 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 FAM237AA0A1B0GTK4 181 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 KIF28PB7ZC32 967 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 MAP3K13O43283 966 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 IL12RB1P42701 662 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 MYL7Q01449 175 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 RAPGEF5Q92565 580 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 ZIM3Q96PE6 472 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 CLEC4MQ9H2X3 399 aaPredicted RBP7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 DTNAQ9Y4J8 743 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 FRMPD4Q14CM0 1322 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 TSHRP16473 764 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 ARHGEF16Q5VV41 709 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 NIPAL1Q6NVV3 410 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 MIGA2Q7L4E1 593 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 CCT6BQ92526 530 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 GCOM2Q9BZD3 368 aaPredicted RBP7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 OSBPL6Q9BZF3 934 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 AASDHPPTQ9NRN7 309 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 IARS2Q9NSE4 1012 aaKnown RBP7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 TRPC5Q9UL62 973 aaPredicted RBP7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 HPS5Q9UPZ3 1129 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 TTC26A0AVF1 554 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 FGGP02679 453 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 CD97P48960 835 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 USP11P51784 963 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 TRAP1Q12931 704 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 TBC1D9BQ66K14 1250 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 LPCAT2Q7L5N7 544 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 UHMK1Q8TAS1 419 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 TBCKQ8TEA7 893 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 DACH2Q96NX9 599 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 TRIM45Q9H8W5 580 aaPredicted RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 CAB39LQ9H9S4 337 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 TRIM17Q9Y577 477 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 COMMD10Q9Y6G5 202 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 ZNF638Q14966 1978 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 PABPC1P11940 636 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 RAD51Q06609 339 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 MPP3Q13368 585 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 LRRC47Q8N1G4 583 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 MRPL47Q9HD33 250 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 SNTNA6NMZ2 147 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 ITGAXP20702 1163 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 STIP1P31948 543 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 MESDQ14696 234 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 ZNF846Q147U1 533 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 ZNF423Q2M1K9 1284 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 IQCKQ8N0W5 287 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 C7orf26Q96N11 449 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 CCDC90BQ9GZT6 254 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 PPARGC1AQ9UBK2 798 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 FBXO9Q9UK97 447 aaPredicted RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 MKLN1Q9UL63 735 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 KLHL20Q9Y2M5 609 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 SH3PXD2BA1X283 911 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 UFL1O94874 794 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 CCDC130P13994 396 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 ERP29P30040 261 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 SERPINB9P50453 376 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 COPZ1P61923 177 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 CASC4Q6P4E1 433 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 TBC1D10CQ8IV04 446 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 CSRNP1Q96S65 589 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 BTBD10Q9BSF8 475 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 B3GNT3Q9Y2A9 372 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 RIMBP2O15034 1052 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 PDHBP11177 359 aa7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 PSMC2P35998 433 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-202ENST00000429713 CCT8P50990 548 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms