RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 TRIM49CP0CI26 452 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 P4HA1P13674 534 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 FMO5P49326 533 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 ZNF165P49910 485 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 MYL6P60660 151 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 KCNH2Q12809 1159 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 KCNC3Q14003 757 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 RAB33AQ14088 237 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 PSMD5Q16401 504 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 WDR72Q3MJ13 1102 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 ANO6Q4KMQ2 910 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 TCEAL5Q5H9L2 206 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 TCERG1LQ5VWI1 586 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 PLPP4Q5VZY2 271 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 CEP57Q86XR8 500 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 EFHBQ8N7U6 833 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 CCDC150Q8NCX0 1101 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 CLSTN3Q9BQT9 956 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 IMPG2Q9BZV3 1241 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 CDH23Q9H251 3354 aa16.06■□□□□ 0.16
GARNL3-204ENST00000429629 GTPBP10A4D1E9 387 aaKnown RBP16.05■□□□□ 0.16
GARNL3-204ENST00000429629 I3L4J1 428 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 TULP1O00294 542 aaPredicted RBP16.05■□□□□ 0.16
GARNL3-204ENST00000429629 TEX28O15482 410 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 CLASP2O75122 1294 aaKnown RBP16.05■□□□□ 0.16
GARNL3-204ENST00000429629 PAPLNO95428 1278 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 HYAL1Q12794 435 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 SMARCB1Q12824 385 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 ADAM15Q13444 863 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 NCAPHQ15003 741 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 SOWAHAQ2M3V2 549 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 TCP11X2Q5H9J9 407 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 DCAF17Q5H9S7 520 aaPredicted RBP16.05■□□□□ 0.16
GARNL3-204ENST00000429629 ZNF667Q5HYK9 610 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 TPGS2Q68CL5 300 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 OVOS1Q6IE37 1185 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 ZNF280DQ6N043 979 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 LILRA6Q6PI73 481 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 THEM5Q8N1Q8 247 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 TMEM130Q8N3G9 435 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 TTC39CQ8N584 583 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 TAS1R2Q8TE23 839 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 SLC22A17Q8WUG5 538 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 PABPC5Q96DU9 382 aaKnown RBP16.05■□□□□ 0.16
GARNL3-204ENST00000429629 CYP3A43Q9HB55 503 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 SAMSN1Q9NSI8 373 aaKnown RBP16.05■□□□□ 0.16
GARNL3-204ENST00000429629 SNX9Q9Y5X1 595 aa16.05■□□□□ 0.16
GARNL3-204ENST00000429629 CITO14578 2027 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 ZNF18P17022 549 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 WARSP23381 471 aaKnown RBP16.04■□□□□ 0.16
GARNL3-204ENST00000429629 KLRC2P26717 231 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 TNNC1P63316 161 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 MAN2A1Q16706 1144 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 ZNF699Q32M78 642 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 CBWD6Q4V339 395 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 WDR44Q5JSH3 913 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 CBWD3Q5JTY5 395 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 CBWD5Q5RIA9 395 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 WSCD1Q658N2 575 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 SCARA3Q6AZY7 606 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 ELMSAN1Q6PJG2 1045 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 PDCL2Q8N4E4 241 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 ZNF461Q8TAF7 563 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 FAM84AQ96KN4 292 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 B3GALT6Q96L58 329 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 ACBD6Q9BR61 282 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 PLEKHA4Q9H4M7 779 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 FANCLQ9NW38 375 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 HSFX1Q9UBD0 423 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 FBXL5Q9UKA1 691 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 L1RE1Q9UN81 338 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 COG5Q9UP83 839 aa16.04■□□□□ 0.16
GARNL3-204ENST00000429629 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.03■□□□□ 0.16
GARNL3-204ENST00000429629 KCNJ18B7U540 433 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 C2CD2LO14523 706 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 ABLIM3O94929 683 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 SRGAP2BP0DMP2 458 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 HOXB8P17481 243 aaPredicted RBP16.03■□□□□ 0.16
GARNL3-204ENST00000429629 PIK3CAP42336 1068 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 MTIF2P46199 727 aaKnown RBP16.03■□□□□ 0.16
GARNL3-204ENST00000429629 NRIP1P48552 1158 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 CLCN4P51793 760 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 GPR17Q13304 367 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 KCNJ12Q14500 433 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 IQCB1Q15051 598 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 UVSSAQ2YD98 709 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 CTXN3Q4LDR2 81 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 PRSS55Q6UWB4 352 aaPredicted RBP16.03■□□□□ 0.16
GARNL3-204ENST00000429629 ADGRD2Q7Z7M1 963 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 ANKRD20A12PQ8NF67 263 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 AUTS2Q8WXX7 1259 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 CASP10Q92851 521 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 FAM81BQ96LP2 452 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 TUBGCP2Q9BSJ2 902 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 BCO2Q9BYV7 579 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 RHOBTB2Q9BYZ6 727 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 LIMA1Q9UHB6 759 aaKnown RBP16.03■□□□□ 0.16
GARNL3-204ENST00000429629 PCDHGC5Q9Y5F6 944 aa16.03■□□□□ 0.16
GARNL3-204ENST00000429629 PCSK1P29120 753 aa16.02■□□□□ 0.16
GARNL3-204ENST00000429629 OR1D2P34982 312 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms