RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 BCAMP50895 628 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 DYNLL1P63167 89 aaKnown RBP16.96■□□□□ 0.31
C9orf3-206ENST00000428313 MESDQ14696 234 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 METTL25Q8N6Q8 603 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 RBM15BQ8NDT2 890 aaKnown RBP16.96■□□□□ 0.31
C9orf3-206ENST00000428313 DDI1Q8WTU0 396 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 C1orf54Q8WWF1 131 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 AGPAT1Q99943 283 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 PRDM16Q9HAZ2 1276 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 ESYT2A0FGR8 921 aa16.95■□□□□ 0.3
C9orf3-206ENST00000428313 MATN2O00339 956 aa16.95■□□□□ 0.3
C9orf3-206ENST00000428313 TM9SF1O15321 606 aa16.95■□□□□ 0.3
C9orf3-206ENST00000428313 DLDP09622 509 aaKnown RBP16.95■□□□□ 0.3
C9orf3-206ENST00000428313 DHRS4L2Q6PKH6 230 aa16.95■□□□□ 0.3
C9orf3-206ENST00000428313 NLRP10Q86W26 655 aa16.95■□□□□ 0.3
C9orf3-206ENST00000428313 REXO1Q8N1G1 1221 aaKnown RBP16.95■□□□□ 0.3
C9orf3-206ENST00000428313 ZCCHC9Q8N567 271 aaKnown RBP16.95■□□□□ 0.3
C9orf3-206ENST00000428313 C1orf21Q9H246 121 aa16.95■□□□□ 0.3
C9orf3-206ENST00000428313 SEPT11Q9NVA2 429 aaKnown RBP16.95■□□□□ 0.3
C9orf3-206ENST00000428313 SPOPO43791 374 aa16.95■□□□□ 0.3
C9orf3-206ENST00000428313 SLC37A4O43826 429 aa16.95■□□□□ 0.3
C9orf3-206ENST00000428313 BCL2A1Q16548 175 aa16.95■□□□□ 0.3
C9orf3-206ENST00000428313 PACS1Q6VY07 963 aa16.95■□□□□ 0.3
C9orf3-206ENST00000428313 TMEM110Q86TL2 294 aa16.95■□□□□ 0.3
C9orf3-206ENST00000428313 PALB2Q86YC2 1186 aa16.95■□□□□ 0.3
C9orf3-206ENST00000428313 DEPTORQ8TB45 409 aa16.95■□□□□ 0.3
C9orf3-206ENST00000428313 PSPC1Q8WXF1 523 aaKnown RBP16.95■□□□□ 0.3
C9orf3-206ENST00000428313 ITPKCQ96DU7 683 aa16.95■□□□□ 0.3
C9orf3-206ENST00000428313 PWWP2AQ96N64 755 aa16.95■□□□□ 0.3
C9orf3-206ENST00000428313 SENP6Q9GZR1 1112 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-206ENST00000428313 PLGRKTQ9HBL7 147 aa16.95■□□□□ 0.3
C9orf3-206ENST00000428313 IL17RBQ9NRM6 502 aa16.95■□□□□ 0.3
C9orf3-206ENST00000428313 NEU2Q9Y3R4 380 aa16.95■□□□□ 0.3
C9orf3-206ENST00000428313 FADS3Q9Y5Q0 445 aa16.95■□□□□ 0.3
C9orf3-206ENST00000428313 SPDYE16A6NNV3 312 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-206ENST00000428313 SPECC1L-ADORA2AF8WAN1 911 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 CASQ2O14958 399 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-206ENST00000428313 CLDN3O15551 220 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 PLA2G4BP0C869 781 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 RRM1P23921 792 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 ADRA1DP25100 572 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 SLC5A2P31639 672 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 HALP42357 657 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 TBCCQ15814 346 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 SEPT7Q16181 437 aaKnown RBP16.94■□□□□ 0.3
C9orf3-206ENST00000428313 MYLK3Q32MK0 819 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 SBK1Q52WX2 424 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 SYCP2LQ5T4T6 812 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 RC3H1Q5TC82 1133 aaKnown RBP16.94■□□□□ 0.3
C9orf3-206ENST00000428313 GPBP1Q86WP2 473 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 ZCRB1Q8TBF4 217 aaKnown RBP16.94■□□□□ 0.3
C9orf3-206ENST00000428313 GDPD5Q8WTR4 605 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 RBM15Q96T37 977 aaKnown RBP eCLIP16.94■□□□□ 0.3
C9orf3-206ENST00000428313 PSMC3IPQ9P2W1 217 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-206ENST00000428313 FAF1Q9UNN5 650 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-206ENST00000428313 TDRKHQ9Y2W6 561 aaKnown RBP16.94■□□□□ 0.3
C9orf3-206ENST00000428313 HBS1LQ9Y450 684 aaKnown RBP16.94■□□□□ 0.3
C9orf3-206ENST00000428313 DCCP43146 1447 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 STK10O94804 968 aaKnown RBP16.94■□□□□ 0.3
C9orf3-206ENST00000428313 FTLP02792 175 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-206ENST00000428313 ARL4CP56559 192 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 COG7P83436 770 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 FOLH1Q04609 750 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 USP41Q3LFD5 358 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 CYP4F22Q6NT55 531 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 CENPUQ71F23 418 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 TTC7BQ86TV6 843 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 AHI1Q8N157 1196 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 CCDC89Q8N998 374 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 ICA1LQ8NDH6 482 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 TEKT1Q969V4 418 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 BIRC8Q96P09 236 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 THTPAQ9BU02 230 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 MAK16Q9BXY0 300 aaKnown RBP16.94■□□□□ 0.3
C9orf3-206ENST00000428313 DCLK3Q9C098 648 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 Q9H521 79 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 ZNF696Q9H7X3 374 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 CHST7Q9NS84 486 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 TAGLN3Q9UI15 199 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 STX8Q9UNK0 236 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 LZTS1Q9Y250 596 aa16.94■□□□□ 0.3
C9orf3-206ENST00000428313 TOGARAM1Q9Y4F4 1720 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 CCDC162PA2VCL2 907 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 POC1B-GALNT4F8VUJ3 575 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 NR3C1P04150 777 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 PLS3P13797 630 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 RFX1P22670 979 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 PCSK6P29122 969 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 CENPCQ03188 943 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 CLPPQ16740 277 aaPredicted RBP16.93■□□□□ 0.3
C9orf3-206ENST00000428313 IZUMO3Q5VZ72 239 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 FBXL19Q6PCT2 694 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 CHSY1Q86X52 802 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 ERI1Q8IV48 349 aaKnown RBP16.93■□□□□ 0.3
C9orf3-206ENST00000428313 PRPF31Q8WWY3 499 aaKnown RBP16.93■□□□□ 0.3
C9orf3-206ENST00000428313 JADE3Q92613 823 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 NMUR2Q9GZQ4 415 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 LRRC4BQ9NT99 713 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 MYH11P35749 1972 aa16.93■□□□□ 0.3
C9orf3-206ENST00000428313 ADCY3O60266 1144 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms