RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 LENG9Q96B70 501 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 CCDC77Q9BR77 488 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 THAP2Q9H0W7 228 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 FBXO6Q9NRD1 293 aaPredicted RBP5.43□□□□□ -1.54
RIF1-203ENST00000428287 EIF3DO15371 548 aaKnown RBP eCLIP5.43□□□□□ -1.54
RIF1-203ENST00000428287 CBFA2T3O75081 653 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 PLA2G4FQ68DD2 849 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 B3GNT6Q6ZMB0 384 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 ZNF804AQ7Z570 1209 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 BHMT2Q9H2M3 363 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 MLXIPLQ9NP71 852 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 CLIC5Q9NZA1 410 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 MTO1Q9Y2Z2 717 aaKnown RBP5.43□□□□□ -1.54
RIF1-203ENST00000428287 ZNF318Q5VUA4 2279 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 A6NJR5 290 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 FOXN3O00409 490 aaPredicted RBP5.43□□□□□ -1.54
RIF1-203ENST00000428287 P4HA2O15460 535 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 SLC37A4O43826 429 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 NMT2O60551 498 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 RFWD3Q6PCD5 774 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 NET1Q7Z628 596 aaPredicted RBP5.43□□□□□ -1.54
RIF1-203ENST00000428287 TTC7BQ86TV6 843 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 PDCD7Q8N8D1 485 aaKnown RBP5.43□□□□□ -1.54
RIF1-203ENST00000428287 RBM15BQ8NDT2 890 aaKnown RBP5.43□□□□□ -1.54
RIF1-203ENST00000428287 CORO1BQ9BR76 489 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 AVENQ9NQS1 362 aaPredicted RBP5.43□□□□□ -1.54
RIF1-203ENST00000428287 CDH7Q9ULB5 785 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 PPM1HQ9ULR3 514 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 PADI4Q9UM07 663 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 PPME1Q9Y570 386 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 WASF2Q9Y6W5 498 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 FAM200BP0CF97 657 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 CA4P22748 312 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 TPP2P29144 1249 aaPredicted RBP5.43□□□□□ -1.54
RIF1-203ENST00000428287 SLC5A2P31639 672 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 TMEM62Q0P6H9 643 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 PPP2R5CQ13362 524 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 LINC00299Q6ZSB3 139 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 C12orf56Q8IXR9 622 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 ZBTB8BQ8NAP8 495 aaPredicted RBP5.43□□□□□ -1.54
RIF1-203ENST00000428287 DDX50Q9BQ39 737 aaKnown RBP5.43□□□□□ -1.54
RIF1-203ENST00000428287 ECSITQ9BQ95 431 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 NOCTQ9UK39 431 aaKnown RBP5.43□□□□□ -1.54
RIF1-203ENST00000428287 PLA2G4CQ9UP65 541 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 CCDC162PA2VCL2 907 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 SMCO2A6NFE2 343 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 POTEMA6NI47 508 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 TSPY2A6NKD2 308 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 DNAJA2O60884 412 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 STARD3NLO95772 234 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 ZCCHC18P0CG32 403 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 MYBL1P10243 752 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 COMTP21964 271 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 SLC18A2Q05940 514 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 MIGA1Q8NAN2 632 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 GPKOWQ92917 476 aaPredicted RBP eCLIP5.43□□□□□ -1.541e-6■■■□□ 16
RIF1-203ENST00000428287 DDX27Q96GQ7 796 aaKnown RBP5.43□□□□□ -1.54
RIF1-203ENST00000428287 TSPAN18Q96SJ8 248 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 RBM15Q96T37 977 aaKnown RBP eCLIP5.43□□□□□ -1.546e-8■■□□□ 12
RIF1-203ENST00000428287 NAP1L4Q99733 375 aaKnown RBP5.43□□□□□ -1.54
RIF1-203ENST00000428287 TMEM47Q9BQJ4 181 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 STRA6Q9BX79 667 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 NMUR2Q9GZQ4 415 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 FAIMQ9NVQ4 179 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 UBAP1Q9NZ09 502 aa5.43□□□□□ -1.54
RIF1-203ENST00000428287 SAP30BPQ9UHR5 308 aaKnown RBP5.43□□□□□ -1.54
RIF1-203ENST00000428287 PLCE1Q9P212 2302 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 ASTN1O14525 1302 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 THAP12O43422 761 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 FDX1P10109 184 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 DESP17661 470 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 PCSK6P29122 969 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 CASP4P49662 377 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 NUMBP49757 651 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 EVX2Q03828 476 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 SF3B3Q15393 1217 aaKnown RBP5.42□□□□□ -1.54
RIF1-203ENST00000428287 OTUD6AQ7L8S5 288 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 MTDHQ86UE4 582 aaKnown RBP5.42□□□□□ -1.54
RIF1-203ENST00000428287 CCDC33Q8N5R6 958 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 BBOF1Q8ND07 529 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 SNX29Q8TEQ0 813 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 PLIN2Q99541 437 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 NLRP2Q9NX02 1062 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 PPP1R1BQ9UD71 204 aaPredicted RBP5.42□□□□□ -1.54
RIF1-203ENST00000428287 LY75O60449 1722 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 FTLP02792 175 aaPredicted RBP5.42□□□□□ -1.54
RIF1-203ENST00000428287 C8BP07358 591 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 HARSP12081 509 aaKnown RBP5.42□□□□□ -1.54
RIF1-203ENST00000428287 UQCRBP14927 111 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 GEMIN4P57678 1058 aaKnown RBP5.42□□□□□ -1.54
RIF1-203ENST00000428287 PLCB3Q01970 1234 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 MED21Q13503 144 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 CCDC6Q16204 474 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 ANKRD20A4Q4UJ75 823 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 SLC15A3Q8IY34 581 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 ST13P4Q8IZP2 240 aaPredicted RBP5.42□□□□□ -1.54
RIF1-203ENST00000428287 AHI1Q8N157 1196 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 NME8Q8N427 588 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 GLT8D2Q9H1C3 349 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 PDZD7Q9H5P4 517 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms