RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 LMCD1Q9NZU5 365 aa16.26■□□□□ 0.19
VARS2-203ENST00000428017 LIMA1Q9UHB6 759 aaKnown RBP16.26■□□□□ 0.19
VARS2-203ENST00000428017 COQ4Q9Y3A0 265 aa16.26■□□□□ 0.19
VARS2-203ENST00000428017 TIMM13Q9Y5L4 95 aaPredicted RBP16.26■□□□□ 0.19
VARS2-203ENST00000428017 EFEMP2O95967 443 aa16.25■□□□□ 0.19
VARS2-203ENST00000428017 ATP1A3P13637 1013 aa16.25■□□□□ 0.19
VARS2-203ENST00000428017 NOP14P78316 857 aaKnown RBP16.25■□□□□ 0.19
VARS2-203ENST00000428017 PTPN14Q15678 1187 aa16.25■□□□□ 0.19
VARS2-203ENST00000428017 PSMD5Q16401 504 aa16.25■□□□□ 0.19
VARS2-203ENST00000428017 FILIP1LQ4L180 1135 aa16.25■□□□□ 0.19
VARS2-203ENST00000428017 RTP2Q5QGT7 225 aa16.25■□□□□ 0.19
VARS2-203ENST00000428017 VARS2Q5ST30 1063 aaKnown RBP16.25■□□□□ 0.19
VARS2-203ENST00000428017 SCARA3Q6AZY7 606 aa16.25■□□□□ 0.19
VARS2-203ENST00000428017 OVOS1Q6IE37 1185 aa16.25■□□□□ 0.19
VARS2-203ENST00000428017 ZNF280DQ6N043 979 aa16.25■□□□□ 0.19
VARS2-203ENST00000428017 GBP6Q6ZN66 633 aa16.25■□□□□ 0.19
VARS2-203ENST00000428017 GPR65Q8IYL9 337 aa16.25■□□□□ 0.19
VARS2-203ENST00000428017 THEM5Q8N1Q8 247 aa16.25■□□□□ 0.19
VARS2-203ENST00000428017 TMEM86AQ8N2M4 240 aa16.25■□□□□ 0.19
VARS2-203ENST00000428017 MRPL43Q8N983 215 aaKnown RBP16.25■□□□□ 0.19
VARS2-203ENST00000428017 RNF214Q8ND24 703 aa16.25■□□□□ 0.19
VARS2-203ENST00000428017 AUTS2Q8WXX7 1259 aa16.25■□□□□ 0.19
VARS2-203ENST00000428017 PIK3R5Q8WYR1 880 aa16.25■□□□□ 0.19
VARS2-203ENST00000428017 VRTNQ9H8Y1 702 aa16.25■□□□□ 0.19
VARS2-203ENST00000428017 GCNT4Q9P109 453 aa16.25■□□□□ 0.19
VARS2-203ENST00000428017 FSCN2O14926 492 aa16.24■□□□□ 0.19
VARS2-203ENST00000428017 SERPINC1P01008 464 aa16.24■□□□□ 0.19
VARS2-203ENST00000428017 IRS1P35568 1242 aa16.24■□□□□ 0.19
VARS2-203ENST00000428017 COPB1P53618 953 aaKnown RBP16.24■□□□□ 0.19
VARS2-203ENST00000428017 CAMK1Q14012 370 aa16.24■□□□□ 0.19
VARS2-203ENST00000428017 EXOC3L4Q17RC7 722 aa16.24■□□□□ 0.19
VARS2-203ENST00000428017 CTXN3Q4LDR2 81 aa16.24■□□□□ 0.19
VARS2-203ENST00000428017 KIAA0319Q5VV43 1072 aa16.24■□□□□ 0.19
VARS2-203ENST00000428017 WSCD1Q658N2 575 aa16.24■□□□□ 0.19
VARS2-203ENST00000428017 SPOPLQ6IQ16 392 aa16.24■□□□□ 0.19
VARS2-203ENST00000428017 PRSS55Q6UWB4 352 aaPredicted RBP16.24■□□□□ 0.19
VARS2-203ENST00000428017 DPH6Q7L8W6 267 aa16.24■□□□□ 0.19
VARS2-203ENST00000428017 PDCL2Q8N4E4 241 aa16.24■□□□□ 0.19
VARS2-203ENST00000428017 EHBP1Q8NDI1 1231 aa16.24■□□□□ 0.19
VARS2-203ENST00000428017 SEMA4DQ92854 862 aa16.24■□□□□ 0.19
VARS2-203ENST00000428017 NT5C1BQ96P26 610 aa16.24■□□□□ 0.19
VARS2-203ENST00000428017 CDX2Q99626 313 aaPredicted RBP16.24■□□□□ 0.19
VARS2-203ENST00000428017 OXCT2Q9BYC2 517 aaPredicted RBP16.24■□□□□ 0.19
VARS2-203ENST00000428017 NIF3L1Q9GZT8 377 aa16.24■□□□□ 0.19
VARS2-203ENST00000428017 INTS2Q9H0H0 1204 aaKnown RBP16.24■□□□□ 0.19
VARS2-203ENST00000428017 HSD3B7Q9H2F3 369 aa16.24■□□□□ 0.19
VARS2-203ENST00000428017 SNX25Q9H3E2 840 aa16.24■□□□□ 0.19
VARS2-203ENST00000428017 NSUN3Q9H649 340 aaKnown RBP16.24■□□□□ 0.19
VARS2-203ENST00000428017 ANK1P16157 1881 aa16.24■□□□□ 0.19
VARS2-203ENST00000428017 GTPBP10A4D1E9 387 aaKnown RBP16.23■□□□□ 0.19
VARS2-203ENST00000428017 CYP11A1P05108 521 aa16.23■□□□□ 0.19
VARS2-203ENST00000428017 FOSL2P15408 326 aa16.23■□□□□ 0.19
VARS2-203ENST00000428017 LHX1P48742 406 aa16.23■□□□□ 0.19
VARS2-203ENST00000428017 LRMPQ12912 555 aa16.23■□□□□ 0.19
VARS2-203ENST00000428017 MIIPQ5JXC2 388 aa16.23■□□□□ 0.19
VARS2-203ENST00000428017 SCARA5Q6ZMJ2 495 aa16.23■□□□□ 0.19
VARS2-203ENST00000428017 ADGRF2Q8IZF7 708 aa16.23■□□□□ 0.19
VARS2-203ENST00000428017 MICALL1Q8N3F8 863 aa16.23■□□□□ 0.19
VARS2-203ENST00000428017 SPATA18Q8TC71 538 aa16.23■□□□□ 0.19
VARS2-203ENST00000428017 MYLIPQ8WY64 445 aa16.23■□□□□ 0.19
VARS2-203ENST00000428017 CRACR2AQ9BSW2 395 aa16.23■□□□□ 0.19
VARS2-203ENST00000428017 DNAI2Q9GZS0 605 aa16.23■□□□□ 0.19
VARS2-203ENST00000428017 TLE6Q9H808 572 aa16.23■□□□□ 0.19
VARS2-203ENST00000428017 L1RE1Q9UN81 338 aa16.23■□□□□ 0.19
VARS2-203ENST00000428017 POLIQ9UNA4 740 aa16.23■□□□□ 0.19
VARS2-203ENST00000428017 PCDHGC5Q9Y5F6 944 aa16.23■□□□□ 0.19
VARS2-203ENST00000428017 BACE2Q9Y5Z0 518 aa16.23■□□□□ 0.19
VARS2-203ENST00000428017 IRAK3Q9Y616 596 aa16.23■□□□□ 0.19
VARS2-203ENST00000428017 KIAA1671Q9BY89 1806 aa16.23■□□□□ 0.19
VARS2-203ENST00000428017 PDCD11Q14690 1871 aaKnown RBP16.22■□□□□ 0.19
VARS2-203ENST00000428017 C2orf71A6NGG8 1288 aa16.22■□□□□ 0.19
VARS2-203ENST00000428017 HIDE1A8MVS5 230 aa16.22■□□□□ 0.19
VARS2-203ENST00000428017 OAZ2O95190 189 aa16.22■□□□□ 0.19
VARS2-203ENST00000428017 ADH1AP07327 375 aa16.22■□□□□ 0.19
VARS2-203ENST00000428017 FAM163BP0C2L3 166 aa16.22■□□□□ 0.19
VARS2-203ENST00000428017 KLRC2P26717 231 aa16.22■□□□□ 0.19
VARS2-203ENST00000428017 NDUFV1P49821 464 aa16.22■□□□□ 0.19
VARS2-203ENST00000428017 SOWAHAQ2M3V2 549 aa16.22■□□□□ 0.19
VARS2-203ENST00000428017 LNX1Q8TBB1 728 aaPredicted RBP16.22■□□□□ 0.19
VARS2-203ENST00000428017 ELMO3Q96BJ8 720 aa16.22■□□□□ 0.19
VARS2-203ENST00000428017 FAXDC2Q96IV6 333 aa16.22■□□□□ 0.19
VARS2-203ENST00000428017 PCMTD1Q96MG8 357 aaPredicted RBP16.22■□□□□ 0.19
VARS2-203ENST00000428017 CYP3A43Q9HB55 503 aa16.22■□□□□ 0.19
VARS2-203ENST00000428017 RXFP1Q9HBX9 757 aa16.22■□□□□ 0.19
VARS2-203ENST00000428017 APOBEC3GQ9HC16 384 aaKnown RBP16.22■□□□□ 0.19
VARS2-203ENST00000428017 MTMR10Q9NXD2 777 aa16.22■□□□□ 0.19
VARS2-203ENST00000428017 DDX43Q9NXZ2 648 aaKnown RBP16.22■□□□□ 0.19
VARS2-203ENST00000428017 FNIP2Q9P278 1114 aa16.22■□□□□ 0.19
VARS2-203ENST00000428017 MTRRQ9UBK8 725 aa16.22■□□□□ 0.19
VARS2-203ENST00000428017 MTCH2Q9Y6C9 303 aa16.22■□□□□ 0.19
VARS2-203ENST00000428017 NLRC5Q86WI3 1866 aa16.21■□□□□ 0.19
VARS2-203ENST00000428017 TRIP11Q15643 1979 aa16.21■□□□□ 0.19
VARS2-203ENST00000428017 FSD2A1L4K1 749 aa16.21■□□□□ 0.19
VARS2-203ENST00000428017 LRRC10BA6NIK2 292 aa16.21■□□□□ 0.19
VARS2-203ENST00000428017 OR6C75A6NL08 312 aa16.21■□□□□ 0.19
VARS2-203ENST00000428017 LGALS16A8MUM7 142 aa16.21■□□□□ 0.19
VARS2-203ENST00000428017 TACC1O75410 805 aa16.21■□□□□ 0.19
VARS2-203ENST00000428017 CNPP09543 421 aaKnown RBP16.21■□□□□ 0.19
VARS2-203ENST00000428017 RPL17P18621 184 aaKnown RBP16.21■□□□□ 0.19
VARS2-203ENST00000428017 TRIM21P19474 475 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms