RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 SLC2A4RGQ9NR83 387 aa19.91■□□□□ 0.78
PSPC1-202ENST00000427943 KBTBD4Q9NVX7 518 aa19.91■□□□□ 0.78
PSPC1-202ENST00000427943 CEP72Q9P209 647 aa19.91■□□□□ 0.78
PSPC1-202ENST00000427943 TICRRQ7Z2Z1 1910 aa19.9■□□□□ 0.78
PSPC1-202ENST00000427943 CACNA1HO95180 2353 aa19.9■□□□□ 0.78
PSPC1-202ENST00000427943 PIEZO1Q92508 2521 aa19.9■□□□□ 0.78
PSPC1-202ENST00000427943 GARTP22102 1010 aa19.9■□□□□ 0.78
PSPC1-202ENST00000427943 CDR1P51861 262 aa19.9■□□□□ 0.78
PSPC1-202ENST00000427943 GPC5P78333 572 aa19.9■□□□□ 0.78
PSPC1-202ENST00000427943 ASIC1P78348 528 aa19.9■□□□□ 0.78
PSPC1-202ENST00000427943 PDZD4Q76G19 769 aaPredicted RBP19.9■□□□□ 0.78
PSPC1-202ENST00000427943 TTC9BQ8N6N2 239 aa19.9■□□□□ 0.78
PSPC1-202ENST00000427943 FAM84AQ96KN4 292 aa19.9■□□□□ 0.78
PSPC1-202ENST00000427943 PYM1Q9BRP8 204 aaKnown RBP19.9■□□□□ 0.78
PSPC1-202ENST00000427943 OXCT2Q9BYC2 517 aaPredicted RBP19.9■□□□□ 0.78
PSPC1-202ENST00000427943 CUEDC2Q9H467 287 aa19.9■□□□□ 0.78
PSPC1-202ENST00000427943 TBC1D17Q9HA65 648 aa19.9■□□□□ 0.78
PSPC1-202ENST00000427943 AVENQ9NQS1 362 aaPredicted RBP19.9■□□□□ 0.78
PSPC1-202ENST00000427943 ARHGEF3Q9NR81 526 aa19.9■□□□□ 0.78
PSPC1-202ENST00000427943 RBAKQ9NYW8 714 aaPredicted RBP19.9■□□□□ 0.78
PSPC1-202ENST00000427943 MTMR11A4FU01 709 aa19.89■□□□□ 0.77
PSPC1-202ENST00000427943 MYL4P12829 197 aa19.89■□□□□ 0.77
PSPC1-202ENST00000427943 GJA1P17302 382 aa19.89■□□□□ 0.77
PSPC1-202ENST00000427943 ME1P48163 572 aa19.89■□□□□ 0.77
PSPC1-202ENST00000427943 TAF6P49848 677 aa19.89■□□□□ 0.77
PSPC1-202ENST00000427943 NUBP1P53384 320 aa19.89■□□□□ 0.77
PSPC1-202ENST00000427943 TFAMQ00059 246 aaKnown RBP19.89■□□□□ 0.77
PSPC1-202ENST00000427943 POU5F1Q01860 360 aaKnown RBP19.89■□□□□ 0.77
PSPC1-202ENST00000427943 DUSP4Q13115 394 aa19.89■□□□□ 0.77
PSPC1-202ENST00000427943 GPR17Q13304 367 aa19.89■□□□□ 0.77
PSPC1-202ENST00000427943 IQCEQ6IPM2 695 aa19.89■□□□□ 0.77
PSPC1-202ENST00000427943 ARMCX5Q6P1M9 558 aa19.89■□□□□ 0.77
PSPC1-202ENST00000427943 OR10T2Q8NGX3 314 aa19.89■□□□□ 0.77
PSPC1-202ENST00000427943 KCNG4Q8TDN1 519 aa19.89■□□□□ 0.77
PSPC1-202ENST00000427943 NUP210Q8TEM1 1887 aaPredicted RBP19.89■□□□□ 0.77
PSPC1-202ENST00000427943 ZNF512Q96ME7 567 aaPredicted RBP19.89■□□□□ 0.77
PSPC1-202ENST00000427943 LRRC27Q9C0I9 530 aa19.89■□□□□ 0.77
PSPC1-202ENST00000427943 TMEM206Q9H813 350 aa19.89■□□□□ 0.77
PSPC1-202ENST00000427943 MAFFQ9ULX9 164 aa19.89■□□□□ 0.77
PSPC1-202ENST00000427943 DENND4CQ5VZ89 1909 aa19.88■□□□□ 0.77
PSPC1-202ENST00000427943 OBSL1O75147 1896 aa19.88■□□□□ 0.77
PSPC1-202ENST00000427943 COL4A2P08572 1712 aa19.88■□□□□ 0.77
PSPC1-202ENST00000427943 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.88■□□□□ 0.77
PSPC1-202ENST00000427943 CYB561D2O14569 222 aa19.88■□□□□ 0.77
PSPC1-202ENST00000427943 ZNF197O14709 1029 aa19.88■□□□□ 0.77
PSPC1-202ENST00000427943 POLR2DO15514 142 aaKnown RBP19.88■□□□□ 0.77
PSPC1-202ENST00000427943 LDHAP00338 332 aaKnown RBP19.88■□□□□ 0.77
PSPC1-202ENST00000427943 CYP11A1P05108 521 aa19.88■□□□□ 0.77
PSPC1-202ENST00000427943 PDIA4P13667 645 aaKnown RBP19.88■□□□□ 0.77
PSPC1-202ENST00000427943 CASP1P29466 404 aa19.88■□□□□ 0.77
PSPC1-202ENST00000427943 DNM1Q05193 864 aaKnown RBP19.88■□□□□ 0.77
PSPC1-202ENST00000427943 MYBPC2Q14324 1141 aa19.88■□□□□ 0.77
PSPC1-202ENST00000427943 IQUBQ8NA54 791 aa19.88■□□□□ 0.77
PSPC1-202ENST00000427943 ATAD1Q8NBU5 361 aa19.88■□□□□ 0.77
PSPC1-202ENST00000427943 ATOH1Q92858 354 aaPredicted RBP19.88■□□□□ 0.77
PSPC1-202ENST00000427943 RTP3Q9BQQ7 232 aa19.88■□□□□ 0.77
PSPC1-202ENST00000427943 PLA2G2FQ9BZM2 168 aa19.88■□□□□ 0.77
PSPC1-202ENST00000427943 ASAH2Q9NR71 780 aa19.88■□□□□ 0.77
PSPC1-202ENST00000427943 GDE1Q9NZC3 331 aa19.88■□□□□ 0.77
PSPC1-202ENST00000427943 PCDHA7Q9UN72 937 aa19.88■□□□□ 0.77
PSPC1-202ENST00000427943 SLC27A5Q9Y2P5 690 aa19.88■□□□□ 0.77
PSPC1-202ENST00000427943 PATJQ8NI35 1801 aa19.88■□□□□ 0.77
PSPC1-202ENST00000427943 EXTL3O43909 919 aa19.87■□□□□ 0.77
PSPC1-202ENST00000427943 SOAT2O75908 522 aa19.87■□□□□ 0.77
PSPC1-202ENST00000427943 ITGB3P05106 788 aa19.87■□□□□ 0.77
PSPC1-202ENST00000427943 PAX3P23760 479 aa19.87■□□□□ 0.77
PSPC1-202ENST00000427943 POLR2BP30876 1174 aaKnown RBP19.87■□□□□ 0.77
PSPC1-202ENST00000427943 SV2CQ496J9 727 aa19.87■□□□□ 0.77
PSPC1-202ENST00000427943 CYP4A22Q5TCH4 519 aa19.87■□□□□ 0.77
PSPC1-202ENST00000427943 CENPPQ6IPU0 288 aa19.87■□□□□ 0.77
PSPC1-202ENST00000427943 STXBP4Q6ZWJ1 553 aa19.87■□□□□ 0.77
PSPC1-202ENST00000427943 NT5DC4Q86YG4 428 aa19.87■□□□□ 0.77
PSPC1-202ENST00000427943 ZNF560Q96MR9 790 aa19.87■□□□□ 0.77
PSPC1-202ENST00000427943 DNAJC25Q9H1X3 360 aa19.87■□□□□ 0.77
PSPC1-202ENST00000427943 DSEQ9UL01 958 aa19.87■□□□□ 0.77
PSPC1-202ENST00000427943 MOSPD3O75425 235 aa19.86■□□□□ 0.77
PSPC1-202ENST00000427943 FCARP24071 287 aa19.86■□□□□ 0.77
PSPC1-202ENST00000427943 AMPD3Q01432 767 aa19.86■□□□□ 0.77
PSPC1-202ENST00000427943 SNW1Q13573 536 aaKnown RBP19.86■□□□□ 0.77
PSPC1-202ENST00000427943 SLC39A12Q504Y0 691 aa19.86■□□□□ 0.77
PSPC1-202ENST00000427943 WSCD1Q658N2 575 aa19.86■□□□□ 0.77
PSPC1-202ENST00000427943 LMBRD2Q68DH5 695 aaPredicted RBP19.86■□□□□ 0.77
PSPC1-202ENST00000427943 SCARA3Q6AZY7 606 aa19.86■□□□□ 0.77
PSPC1-202ENST00000427943 TANGO2Q6ICL3 276 aa19.86■□□□□ 0.77
PSPC1-202ENST00000427943 METTL23Q86XA0 190 aa19.86■□□□□ 0.77
PSPC1-202ENST00000427943 CCDC105Q8IYK2 499 aa19.86■□□□□ 0.77
PSPC1-202ENST00000427943 GPD1LQ8N335 351 aa19.86■□□□□ 0.77
PSPC1-202ENST00000427943 C1orf127Q8N9H9 656 aa19.86■□□□□ 0.77
PSPC1-202ENST00000427943 FOXQ1Q9C009 403 aa19.86■□□□□ 0.77
PSPC1-202ENST00000427943 BLZF1Q9H2G9 400 aa19.86■□□□□ 0.77
PSPC1-202ENST00000427943 PDE11AQ9HCR9 933 aa19.86■□□□□ 0.77
PSPC1-202ENST00000427943 FAM13BQ9NYF5 915 aa19.86■□□□□ 0.77
PSPC1-202ENST00000427943 ZNF638Q14966 1978 aaKnown RBP19.85■□□□□ 0.77
PSPC1-202ENST00000427943 KPNA7A9QM74 516 aa19.85■□□□□ 0.77
PSPC1-202ENST00000427943 ECI2O75521 394 aa19.85■□□□□ 0.77
PSPC1-202ENST00000427943 HOXD13P35453 343 aa19.85■□□□□ 0.77
PSPC1-202ENST00000427943 ALDH1A3P47895 512 aa19.85■□□□□ 0.77
PSPC1-202ENST00000427943 EPHB3P54753 998 aa19.85■□□□□ 0.77
PSPC1-202ENST00000427943 EPHA5P54756 1037 aa19.85■□□□□ 0.77
PSPC1-202ENST00000427943 PLD1Q13393 1074 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms