RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 PCSK1NQ9UHG2 260 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 DBR1Q9UK59 544 aaKnown RBP11.24□□□□□ -0.61
TCOF1-204ENST00000427724 RAB21Q9UL25 225 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 ST3GAL5Q9UNP4 418 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 PLAGL2Q9UPG8 496 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 HOXC6P09630 235 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 PSMA2P25787 234 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 SCNN1GP51170 649 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 SLC12A2P55011 1212 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 ZBTB16Q05516 673 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 FPGSQ05932 587 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 KRT33BQ14525 404 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 SETDB1Q15047 1291 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 MTFR1Q15390 333 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 PARP9Q8IXQ6 854 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 DBF4BQ8NFT6 615 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 HELQQ8TDG4 1101 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 ERGIC2Q96RQ1 377 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 MRPL17Q9NRX2 175 aaKnown RBP11.24□□□□□ -0.61
TCOF1-204ENST00000427724 KIAA0391O15091 583 aaKnown RBP11.24□□□□□ -0.61
TCOF1-204ENST00000427724 IL18RAPO95256 599 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 CCND3P30281 292 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-204ENST00000427724 NUMBP49757 651 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 SNX1Q13596 522 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 FAM102AQ5T9C2 384 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-204ENST00000427724 NLRP14Q86W24 1093 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 CEP63Q96MT8 703 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 FAM167BQ9BTA0 163 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 TRIM7Q9C029 511 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 ATXN3LQ9H3M9 355 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 DNAJC18Q9H819 358 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 DONSONQ9NYP3 566 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 TBX20Q9UMR3 447 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 KPNA1P52294 538 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-204ENST00000427724 CDK17Q00537 523 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 CCDC38Q502W7 563 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 PLPP4Q5VZY2 271 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 MPZL3Q6UWV2 235 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 KCTD6Q8NC69 237 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 SREK1Q8WXA9 508 aaKnown RBP11.23□□□□□ -0.61
TCOF1-204ENST00000427724 LPPQ93052 612 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 KCND2Q9NZV8 630 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 C10orf71Q711Q0 1435 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 PI4K2BG5E9Z4 385 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 ZBTB39O15060 712 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 TREHO43280 583 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 XYLBO75191 536 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 ADCY8P40145 1251 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 SESN3P58005 492 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 SATB1Q01826 763 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 YWHAHQ04917 246 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-204ENST00000427724 SGSM1Q2NKQ1 1148 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 ANO4Q32M45 955 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 TDRD10Q5VZ19 366 aaKnown RBP11.23□□□□□ -0.61
TCOF1-204ENST00000427724 SLC27A1Q6PCB7 646 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 LRRC8DQ7L1W4 858 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 TAOK1Q7L7X3 1001 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 FMO2Q99518 471 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 PLCB1Q9NQ66 1216 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 ARHGAP20Q9P2F6 1191 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 CACNA1GO43497 2377 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 MOXD2PA6NHM9 499 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 HMGB1P1B2RPK0 211 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-204ENST00000427724 MBL2P11226 248 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-204ENST00000427724 SMPD1P17405 629 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 ZNF211Q13398 564 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-204ENST00000427724 CLUL1Q15846 466 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 PAPD7Q5XG87 772 aaKnown RBP11.23□□□□□ -0.61
TCOF1-204ENST00000427724 OVOS1Q6IE37 1185 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 NDUFAF2Q8N183 169 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 DNAAF3Q8N9W5 541 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 HSPH1Q92598 858 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 NT5C1AQ9BXI3 368 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 FTHL17Q9BXU8 183 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 SEMA6BQ9H3T3 888 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 FAM114A2Q9NRY5 505 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 ABCF3Q9NUQ8 709 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 SMPD4Q9NXE4 827 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 AMACRQ9UHK6 382 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 ANAPC5Q9UJX4 755 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 UNCXA6NJT0 531 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 CLTBP09497 229 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 CXCL8P10145 99 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 SAT1P21673 171 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 MAN1A1P33908 653 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 RARRES1P49788 294 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 SNX17Q15036 470 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 MOXD1Q6UVY6 613 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 ARMC2Q8NEN0 867 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 HDAC7Q8WUI4 952 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 PI4K2AQ9BTU6 479 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 C17orf75Q9HAS0 396 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 TRPM5Q9NZQ8 1165 aa11.23□□□□□ -0.61
TCOF1-204ENST00000427724 COL16A1Q07092 1604 aaPredicted RBP11.22□□□□□ -0.61
TCOF1-204ENST00000427724 MAP2K7O14733 419 aa11.22□□□□□ -0.61
TCOF1-204ENST00000427724 GIPC1O14908 333 aa11.22□□□□□ -0.61
TCOF1-204ENST00000427724 CXCL14O95715 111 aa11.22□□□□□ -0.61
TCOF1-204ENST00000427724 PNPLA4P41247 253 aa11.22□□□□□ -0.61
TCOF1-204ENST00000427724 CTAGE3PQ8IX95 158 aa11.22□□□□□ -0.61
TCOF1-204ENST00000427724 KIAA0319LQ8IZA0 1049 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms