RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 PHF13Q86YI8 300 aaPredicted RBP15.15■□□□□ 0.02
LIG1-202ENST00000427526 CCDC89Q8N998 374 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 DYDC1Q8WWB3 177 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 KCNN1Q92952 543 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 CDHR1Q96JP9 859 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 FNBP1Q96RU3 617 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 OSBPL8Q9BZF1 889 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 SPATC1LQ9H0A9 340 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 EURLQ9NYK6 297 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 A0A0G2JLL6 359 aaPredicted RBP15.14■□□□□ 0.01
LIG1-202ENST00000427526 H0YCG3 227 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 ABCD1P33897 745 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 LIG4P49917 911 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 PRKCEQ02156 737 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 CUL2Q13617 745 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 GALNTL6Q49A17 601 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 PREPLQ4J6C6 727 aaPredicted RBP15.14■□□□□ 0.01
LIG1-202ENST00000427526 TRIM72Q6ZMU5 477 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 PRRT2Q7Z6L0 340 aaPredicted RBP15.14■□□□□ 0.01
LIG1-202ENST00000427526 RIOX2Q8IUF8 465 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 EXD1Q8NHP7 514 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.14■□□□□ 0.01
LIG1-202ENST00000427526 FAM118BQ9BPY3 351 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 C11orf70Q9BRQ4 267 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 MRPL47Q9HD33 250 aaKnown RBP15.14■□□□□ 0.01
LIG1-202ENST00000427526 ADAM22Q9P0K1 906 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 SEPT9Q9UHD8 586 aaPredicted RBP15.14■□□□□ 0.01
LIG1-202ENST00000427526 SUFUQ9UMX1 484 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 AGAP1Q9UPQ3 857 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 NAALADL1Q9UQQ1 740 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 KIAA1217Q5T5P2 1943 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 NFASCO94856 1347 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 GH1P01241 217 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 BRAFP15056 766 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 PIK3CAP42336 1068 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 ACOT2P49753 483 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 VPS41P49754 854 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 TMEM63BQ5T3F8 832 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 LIN9Q5TKA1 542 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 HIBCHQ6NVY1 386 aaPredicted RBP15.14■□□□□ 0.01
LIG1-202ENST00000427526 BBOF1Q8ND07 529 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 RNF217Q8TC41 542 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 ASCC2Q9H1I8 757 aaPredicted RBP15.14■□□□□ 0.01
LIG1-202ENST00000427526 ALDH5A1P51649 535 aaPredicted RBP15.14■□□□□ 0.01
LIG1-202ENST00000427526 ERO1BQ86YB8 467 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 ANKRD13AQ8IZ07 590 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 DNERQ8NFT8 737 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 KCNK9Q9NPC2 374 aa15.14■□□□□ 0.01
LIG1-202ENST00000427526 AGO2Q9UKV8 859 aaKnown RBP15.14■□□□□ 0.01
LIG1-202ENST00000427526 SOWAHBA6NEL2 793 aa15.13■□□□□ 0.01
LIG1-202ENST00000427526 CDH16O75309 829 aa15.13■□□□□ 0.01
LIG1-202ENST00000427526 STAM2O75886 525 aa15.13■□□□□ 0.01
LIG1-202ENST00000427526 FAM133BQ5BKY9 247 aaKnown RBP15.13■□□□□ 0.01
LIG1-202ENST00000427526 IZUMO3Q5VZ72 239 aa15.13■□□□□ 0.01
LIG1-202ENST00000427526 ZNF365Q70YC5 407 aa15.13■□□□□ 0.01
LIG1-202ENST00000427526 EEPD1Q7L9B9 569 aa15.13■□□□□ 0.01
LIG1-202ENST00000427526 PASD1Q8IV76 773 aa15.13■□□□□ 0.01
LIG1-202ENST00000427526 PRKAG3Q9UGI9 489 aa15.13■□□□□ 0.01
LIG1-202ENST00000427526 WDR90Q96KV7 1748 aa15.13■□□□□ 0.01
LIG1-202ENST00000427526 KIF1CO43896 1103 aaKnown RBP15.13■□□□□ 0.01
LIG1-202ENST00000427526 ATP4AP20648 1035 aa15.13■□□□□ 0.01
LIG1-202ENST00000427526 GNA15P30679 374 aa15.13■□□□□ 0.01
LIG1-202ENST00000427526 EPHX2P34913 555 aa15.13■□□□□ 0.01
LIG1-202ENST00000427526 NUGGCQ68CJ6 796 aa15.13■□□□□ 0.01
LIG1-202ENST00000427526 DPY19L2Q6NUT2 758 aa15.13■□□□□ 0.01
LIG1-202ENST00000427526 TMEM270Q6UE05 265 aa15.13■□□□□ 0.01
LIG1-202ENST00000427526 ANKRD42Q8N9B4 389 aa15.13■□□□□ 0.01
LIG1-202ENST00000427526 CCDC63Q8NA47 563 aa15.13■□□□□ 0.01
LIG1-202ENST00000427526 TXNRD2Q9NNW7 524 aa15.13■□□□□ 0.01
LIG1-202ENST00000427526 MLXIPLQ9NP71 852 aa15.13■□□□□ 0.01
LIG1-202ENST00000427526 ACTL7BQ9Y614 415 aa15.13■□□□□ 0.01
LIG1-202ENST00000427526 TLR3O15455 904 aaKnown RBP15.12■□□□□ 0.01
LIG1-202ENST00000427526 UBOX5O94941 541 aa15.12■□□□□ 0.01
LIG1-202ENST00000427526 GJB6O95452 261 aa15.12■□□□□ 0.01
LIG1-202ENST00000427526 PIGRP01833 764 aa15.12■□□□□ 0.01
LIG1-202ENST00000427526 SUPT20HL2P0C7V6 817 aa15.12■□□□□ 0.01
LIG1-202ENST00000427526 CD58P19256 250 aa15.12■□□□□ 0.01
LIG1-202ENST00000427526 RDXP35241 583 aaKnown RBP15.12■□□□□ 0.01
LIG1-202ENST00000427526 C1QBPQ07021 282 aaKnown RBP15.12■□□□□ 0.01
LIG1-202ENST00000427526 STAT4Q14765 748 aa15.12■□□□□ 0.01
LIG1-202ENST00000427526 MTERF2Q49AM1 385 aa15.12■□□□□ 0.01
LIG1-202ENST00000427526 PRUNE1Q86TP1 453 aa15.12■□□□□ 0.01
LIG1-202ENST00000427526 PCDHB4Q9Y5E5 795 aa15.12■□□□□ 0.01
LIG1-202ENST00000427526 DOCK5Q9H7D0 1870 aa15.12■□□□□ 0.01
LIG1-202ENST00000427526 CFAP73A6NFT4 308 aa15.12■□□□□ 0.01
LIG1-202ENST00000427526 CNMDO75829 334 aa15.12■□□□□ 0.01
LIG1-202ENST00000427526 SUN1O94901 812 aa15.12■□□□□ 0.01
LIG1-202ENST00000427526 ATP6V1G2O95670 118 aa15.12■□□□□ 0.01
LIG1-202ENST00000427526 Q3C1V9 767 aa15.12■□□□□ 0.01
LIG1-202ENST00000427526 XKR3Q5GH77 459 aa15.12■□□□□ 0.01
LIG1-202ENST00000427526 MIS18BP1Q6P0N0 1132 aa15.12■□□□□ 0.01
LIG1-202ENST00000427526 ZCCHC9Q8N567 271 aaKnown RBP15.12■□□□□ 0.01
LIG1-202ENST00000427526 ZBTB45Q96K62 511 aaPredicted RBP15.12■□□□□ 0.01
LIG1-202ENST00000427526 C9orf72Q96LT7 481 aa15.12■□□□□ 0.01
LIG1-202ENST00000427526 TBK1Q9UHD2 729 aa15.12■□□□□ 0.01
LIG1-202ENST00000427526 SCINQ9Y6U3 715 aa15.12■□□□□ 0.01
LIG1-202ENST00000427526 CCDC189A1A4V9 331 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 SPDYE5A6NIY4 337 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 PGK2P07205 417 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 SSTR3P32745 418 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms