RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 HSFX1Q9UBD0 423 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 SLC24A2Q9UI40 661 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 CCPG1Q9ULG6 757 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 RABL2BQ9UNT1 228 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 COL4A3BPQ9Y5P4 624 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 NWD1Q149M9 1564 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 TNKSO95271 1327 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 CHD1O14646 1710 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 LRP6O75581 1613 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 GOLGA8QA0A0J9YX86 632 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 GSTTP1A0A1W2PQM5 241 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 TTC24A2A3L6 582 aaPredicted RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 FUOMA2VDF0 154 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 GOLGA8OA6NCC3 632 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 A6NJR5 290 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 SOBPA7XYQ1 873 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 GOLGA8NF8WBI6 632 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 H0YC42 278 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 C6orf229H3BNL8 230 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 I3L4J1 428 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 GOLGA8RI6L899 631 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 EIF3FO00303 357 aaPredicted RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 TXNDC9O14530 226 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 GMNNO75496 209 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 DDAH1O94760 285 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 BAG2O95816 211 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 LDHAP00338 332 aaKnown RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 KRT18P05783 430 aaKnown RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 C8BP07358 591 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 TMEM253P0C7T8 217 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 RARBP10826 455 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 ZNF23P17027 643 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 GM2AP17900 193 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 RXRAP19793 462 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 JAK1P23458 1154 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 NFKBIAP25963 317 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 GSSP48637 474 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 SMCPP49901 116 aaPredicted RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 DNA2P51530 1060 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 TPD52P55327 224 aaPredicted RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 MARSP56192 900 aaKnown RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 C21orf59P57076 290 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 ANTXR2P58335 489 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 IFI35P80217 286 aaPredicted RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 BASP1P80723 227 aaKnown RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 CDK16Q00536 496 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 POU5F1Q01860 360 aaKnown RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 CYP4A11Q02928 519 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 CREB5Q02930 508 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 NSUN2Q08J23 767 aaKnown RBP eCLIP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 TFCP2Q12800 502 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 KRR1Q13601 381 aaKnown RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 GCKRQ14397 625 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 C16orf72Q14CZ0 275 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 UBE3CQ15386 1083 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 SLC15A2Q16348 729 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 SGO2Q562F6 1265 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 EFHC1Q5JVL4 640 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 C6orf10Q5SRN2 563 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 CYP4A22Q5TCH4 519 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 SNRNP48Q6IEG0 339 aaKnown RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 TTC27Q6P3X3 843 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 ALKBH5Q6P6C2 394 aaKnown RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 VSTM1Q6UX27 236 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 MFSD6Q6ZSS7 791 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 CHST3Q7LGC8 479 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 UBE2Q1Q7Z7E8 422 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 SATL1Q86VE3 508 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 TREML1Q86YW5 311 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 METTL13Q8N6R0 699 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 TRIML2Q8N7C3 387 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 C12orf50Q8NA57 414 aaPredicted RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 SPERTQ8NA61 448 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 TTLL11Q8NHH1 800 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 NEDD1Q8NHV4 660 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 FBXO25Q8TCJ0 367 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 HM13Q8TCT9 377 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 EPS8L3Q8TE67 593 aaKnown RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 CHPT1Q8WUD6 406 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 C10orf82Q8WW14 230 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 ATL1Q8WXF7 558 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 RMDN1Q96DB5 314 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 PTCD3Q96EY7 689 aaKnown RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 CFAP36Q96G28 342 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 NLRP4Q96MN2 994 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 SERPINI1Q99574 410 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 NAP1L4Q99733 375 aaKnown RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 DBNDD2Q9BQY9 259 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 C1orf50Q9BV19 199 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 CADM1Q9BY67 442 aaKnown RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 WNT8AQ9H1J5 351 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 VPS11Q9H270 941 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 NEUROG2Q9H2A3 272 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 LY9Q9HBG7 655 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 VTA1Q9NP79 307 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 MRPL40Q9NQ50 206 aaKnown RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 C8orf4Q9NR00 106 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 KRT82Q9NSB4 513 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 ARMC1Q9NVT9 282 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 SMARCAL1Q9NZC9 954 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms