RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 DLG4P78352 724 aa27.07■■□□□ 1.92
HERPUD2-205ENST00000427455 PAK1Q13153 545 aa27.07■■□□□ 1.92
HERPUD2-205ENST00000427455 TJAP1Q5JTD0 557 aa27.07■■□□□ 1.92
HERPUD2-205ENST00000427455 SCARA3Q6AZY7 606 aa27.07■■□□□ 1.92
HERPUD2-205ENST00000427455 OVOS1Q6IE37 1185 aa27.07■■□□□ 1.92
HERPUD2-205ENST00000427455 PTCRAQ6ISU1 281 aaPredicted RBP27.07■■□□□ 1.92
HERPUD2-205ENST00000427455 LILRA6Q6PI73 481 aa27.07■■□□□ 1.92
HERPUD2-205ENST00000427455 SYCE2Q6PIF2 218 aa27.07■■□□□ 1.92
HERPUD2-205ENST00000427455 HDAC7Q8WUI4 952 aa27.07■■□□□ 1.92
HERPUD2-205ENST00000427455 HPDLQ96IR7 371 aa27.07■■□□□ 1.92
HERPUD2-205ENST00000427455 PLEKHA4Q9H4M7 779 aa27.07■■□□□ 1.92
HERPUD2-205ENST00000427455 SFXN1Q9H9B4 322 aa27.07■■□□□ 1.92
HERPUD2-205ENST00000427455 FBXL5Q9UKA1 691 aa27.07■■□□□ 1.92
HERPUD2-205ENST00000427455 FAM50BQ9Y247 325 aa27.07■■□□□ 1.92
HERPUD2-205ENST00000427455 SPDYE4A6NLX3 237 aa27.06■■□□□ 1.92
HERPUD2-205ENST00000427455 IKBKBO14920 756 aa27.06■■□□□ 1.92
HERPUD2-205ENST00000427455 BIRC3Q13489 604 aa27.06■■□□□ 1.92
HERPUD2-205ENST00000427455 TDRD10Q5VZ19 366 aaKnown RBP27.06■■□□□ 1.92
HERPUD2-205ENST00000427455 TTI2Q6NXR4 508 aa27.06■■□□□ 1.92
HERPUD2-205ENST00000427455 GDAP2Q9NXN4 497 aa27.06■■□□□ 1.92
HERPUD2-205ENST00000427455 FBXW11Q9UKB1 542 aa27.06■■□□□ 1.92
HERPUD2-205ENST00000427455 MBTPS2O43462 519 aa27.05■■□□□ 1.92
HERPUD2-205ENST00000427455 PHACTR2O75167 634 aa27.05■■□□□ 1.92
HERPUD2-205ENST00000427455 ROR1Q01973 937 aa27.05■■□□□ 1.92
HERPUD2-205ENST00000427455 TRPC3Q13507 836 aa27.05■■□□□ 1.92
HERPUD2-205ENST00000427455 METTL23Q86XA0 190 aa27.05■■□□□ 1.92
HERPUD2-205ENST00000427455 MLKLQ8NB16 471 aa27.05■■□□□ 1.92
HERPUD2-205ENST00000427455 KREMEN2Q8NCW0 462 aa27.05■■□□□ 1.92
HERPUD2-205ENST00000427455 MTCL1Q9Y4B5 1905 aaKnown RBP27.04■■□□□ 1.92
HERPUD2-205ENST00000427455 GRXCR2A6NFK2 248 aa27.04■■□□□ 1.92
HERPUD2-205ENST00000427455 OR6C75A6NL08 312 aa27.04■■□□□ 1.92
HERPUD2-205ENST00000427455 HUS1O60921 280 aa27.04■■□□□ 1.92
HERPUD2-205ENST00000427455 C4BPAP04003 597 aaKnown RBP27.04■■□□□ 1.92
HERPUD2-205ENST00000427455 ITIH3Q06033 890 aa27.04■■□□□ 1.92
HERPUD2-205ENST00000427455 C1orf220Q5T0J3 134 aa27.04■■□□□ 1.92
HERPUD2-205ENST00000427455 CEP63Q96MT8 703 aa27.04■■□□□ 1.92
HERPUD2-205ENST00000427455 DUSP9Q99956 384 aaKnown RBP27.04■■□□□ 1.92
HERPUD2-205ENST00000427455 S1PR5Q9H228 398 aa27.04■■□□□ 1.92
HERPUD2-205ENST00000427455 SNX9Q9Y5X1 595 aa27.04■■□□□ 1.92
HERPUD2-205ENST00000427455 STAU1O95793 577 aaKnown RBP27.03■■□□□ 1.92
HERPUD2-205ENST00000427455 CST3P01034 146 aaPredicted RBP27.03■■□□□ 1.92
HERPUD2-205ENST00000427455 SPATA31D3P0C874 917 aa27.03■■□□□ 1.92
HERPUD2-205ENST00000427455 TRIM49P0CI25 452 aa27.03■■□□□ 1.92
HERPUD2-205ENST00000427455 TRIM49CP0CI26 452 aa27.03■■□□□ 1.92
HERPUD2-205ENST00000427455 MCCD1P59942 119 aaPredicted RBP27.03■■□□□ 1.92
HERPUD2-205ENST00000427455 ZACNQ401N2 412 aa27.03■■□□□ 1.92
HERPUD2-205ENST00000427455 RARS2Q5T160 578 aaKnown RBP27.03■■□□□ 1.92
HERPUD2-205ENST00000427455 LIN9Q5TKA1 542 aa27.03■■□□□ 1.92
HERPUD2-205ENST00000427455 WSCD1Q658N2 575 aa27.03■■□□□ 1.92
HERPUD2-205ENST00000427455 SPATA31D4Q6ZUB0 917 aa27.03■■□□□ 1.92
HERPUD2-205ENST00000427455 APOL5Q9BWW9 433 aa27.03■■□□□ 1.92
HERPUD2-205ENST00000427455 USP15Q9Y4E8 981 aaPredicted RBP27.03■■□□□ 1.92
HERPUD2-205ENST00000427455 WDR27A2RRH5 827 aa27.02■■□□□ 1.92
HERPUD2-205ENST00000427455 BMP1P13497 986 aa27.02■■□□□ 1.92
HERPUD2-205ENST00000427455 CPB1P15086 417 aa27.02■■□□□ 1.92
HERPUD2-205ENST00000427455 ATICP31939 592 aa27.02■■□□□ 1.92
HERPUD2-205ENST00000427455 ARPP19P56211 112 aa27.02■■□□□ 1.92
HERPUD2-205ENST00000427455 STX17P56962 302 aa27.02■■□□□ 1.92
HERPUD2-205ENST00000427455 NCOA4Q13772 614 aa27.02■■□□□ 1.92
HERPUD2-205ENST00000427455 CES5AQ6NT32 575 aa27.02■■□□□ 1.92
HERPUD2-205ENST00000427455 SV2AQ7L0J3 742 aa27.02■■□□□ 1.92
HERPUD2-205ENST00000427455 TMEM86AQ8N2M4 240 aa27.02■■□□□ 1.92
HERPUD2-205ENST00000427455 PDCL2Q8N4E4 241 aa27.02■■□□□ 1.92
HERPUD2-205ENST00000427455 TOP6BLQ8N6T0 577 aa27.02■■□□□ 1.92
HERPUD2-205ENST00000427455 C12orf76Q8N812 135 aaPredicted RBP27.02■■□□□ 1.92
HERPUD2-205ENST00000427455 CMASQ8NFW8 434 aaPredicted RBP27.02■■□□□ 1.92
HERPUD2-205ENST00000427455 ZNF461Q8TAF7 563 aa27.02■■□□□ 1.92
HERPUD2-205ENST00000427455 SPATA18Q8TC71 538 aa27.02■■□□□ 1.92
HERPUD2-205ENST00000427455 SYAP1Q96A49 352 aaPredicted RBP27.02■■□□□ 1.92
HERPUD2-205ENST00000427455 ADAM7Q9H2U9 754 aa27.02■■□□□ 1.92
HERPUD2-205ENST00000427455 RWDD2AQ9UIY3 292 aa27.02■■□□□ 1.92
HERPUD2-205ENST00000427455 L1RE1Q9UN81 338 aa27.02■■□□□ 1.92
HERPUD2-205ENST00000427455 ABLIM3O94929 683 aa27.01■■□□□ 1.91
HERPUD2-205ENST00000427455 IL9P15248 144 aa27.01■■□□□ 1.91
HERPUD2-205ENST00000427455 MYL6P60660 151 aa27.01■■□□□ 1.91
HERPUD2-205ENST00000427455 SMAD2Q15796 467 aaKnown RBP27.01■■□□□ 1.91
HERPUD2-205ENST00000427455 TPGS2Q68CL5 300 aa27.01■■□□□ 1.91
HERPUD2-205ENST00000427455 C15orf39Q6ZRI6 1047 aa27.01■■□□□ 1.91
HERPUD2-205ENST00000427455 RBM43Q6ZSC3 357 aaKnown RBP27.01■■□□□ 1.91
HERPUD2-205ENST00000427455 DPH6Q7L8W6 267 aa27.01■■□□□ 1.91
HERPUD2-205ENST00000427455 THEM5Q8N1Q8 247 aa27.01■■□□□ 1.91
HERPUD2-205ENST00000427455 SUSD6Q92537 303 aa27.01■■□□□ 1.91
HERPUD2-205ENST00000427455 XYLT2Q9H1B5 865 aa27.01■■□□□ 1.91
HERPUD2-205ENST00000427455 ZDHHC7Q9NXF8 308 aa27.01■■□□□ 1.91
HERPUD2-205ENST00000427455 ARMCX3Q9UH62 379 aaPredicted RBP27.01■■□□□ 1.91
HERPUD2-205ENST00000427455 VCANP13611 3396 aa27.01■■□□□ 1.91
HERPUD2-205ENST00000427455 A0A0C4DFX4 3053 aa27.01■■□□□ 1.91
HERPUD2-205ENST00000427455 STX10O60499 249 aa27■■□□□ 1.91
HERPUD2-205ENST00000427455 VNN1O95497 513 aa27■■□□□ 1.91
HERPUD2-205ENST00000427455 GTF2H1P32780 548 aa27■■□□□ 1.91
HERPUD2-205ENST00000427455 GCLMP48507 274 aa27■■□□□ 1.91
HERPUD2-205ENST00000427455 NLRP12P59046 1061 aa27■■□□□ 1.91
HERPUD2-205ENST00000427455 PPP3CAQ08209 521 aa27■■□□□ 1.91
HERPUD2-205ENST00000427455 FILIP1Q7Z7B0 1213 aa27■■□□□ 1.91
HERPUD2-205ENST00000427455 ADGRF2Q8IZF7 708 aa27■■□□□ 1.91
HERPUD2-205ENST00000427455 VRTNQ9H8Y1 702 aa27■■□□□ 1.91
HERPUD2-205ENST00000427455 METTL14Q9HCE5 456 aaKnown RBP27■■□□□ 1.91
HERPUD2-205ENST00000427455 TMEM8AQ9HCN3 771 aa27■■□□□ 1.91
HERPUD2-205ENST00000427455 DACH1Q9UI36 760 aa27■■□□□ 1.91
HERPUD2-205ENST00000427455 ZMYND10O75800 440 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms