RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 SLC39A6Q13433 755 aa6.86□□□□□ -1.31
C9orf3-205ENST00000427193 TERF2Q15554 542 aa6.86□□□□□ -1.31
C9orf3-205ENST00000427193 C21orf62-AS1Q17RA5 79 aa6.86□□□□□ -1.31
C9orf3-205ENST00000427193 ALDH1L2Q3SY69 923 aa6.86□□□□□ -1.31
C9orf3-205ENST00000427193 GPRIN1Q7Z2K8 1008 aa6.86□□□□□ -1.31
C9orf3-205ENST00000427193 NIM1KQ8IY84 436 aa6.86□□□□□ -1.31
C9orf3-205ENST00000427193 MSL3Q8N5Y2 521 aaKnown RBP6.86□□□□□ -1.31
C9orf3-205ENST00000427193 GPR150Q8NGU9 434 aa6.86□□□□□ -1.31
C9orf3-205ENST00000427193 SSH1Q8WYL5 1049 aa6.86□□□□□ -1.31
C9orf3-205ENST00000427193 DRC1Q96MC2 740 aa6.86□□□□□ -1.31
C9orf3-205ENST00000427193 GPR101Q96P66 508 aaPredicted RBP6.86□□□□□ -1.31
C9orf3-205ENST00000427193 ZNF768Q9H5H4 540 aaKnown RBP6.86□□□□□ -1.31
C9orf3-205ENST00000427193 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.86□□□□□ -1.31
C9orf3-205ENST00000427193 ASAP1Q9ULH1 1129 aa6.86□□□□□ -1.31
C9orf3-205ENST00000427193 COL4A3Q01955 1670 aa6.86□□□□□ -1.31
C9orf3-205ENST00000427193 PRR5-ARHGAP8B1AHC4 643 aa6.85□□□□□ -1.31
C9orf3-205ENST00000427193 HSP90B1P14625 803 aaKnown RBP6.85□□□□□ -1.31
C9orf3-205ENST00000427193 APOBEC3AP31941 199 aaPredicted RBP6.85□□□□□ -1.31
C9orf3-205ENST00000427193 MEF2AQ02078 507 aaPredicted RBP6.85□□□□□ -1.31
C9orf3-205ENST00000427193 PPARAQ07869 468 aa6.85□□□□□ -1.31
C9orf3-205ENST00000427193 PCBP1Q15365 356 aaKnown RBP eCLIP6.85□□□□□ -1.31
C9orf3-205ENST00000427193 DEFB115Q30KQ5 88 aa6.85□□□□□ -1.31
C9orf3-205ENST00000427193 TWISTNBQ3B726 338 aaPredicted RBP6.85□□□□□ -1.31
C9orf3-205ENST00000427193 TKFCQ3LXA3 575 aa6.85□□□□□ -1.31
C9orf3-205ENST00000427193 FRMD7Q6ZUT3 714 aa6.85□□□□□ -1.31
C9orf3-205ENST00000427193 GDF7Q7Z4P5 450 aa6.85□□□□□ -1.31
C9orf3-205ENST00000427193 OR2W6PQ8NHA6 318 aa6.85□□□□□ -1.31
C9orf3-205ENST00000427193 TOR3AQ9H497 397 aa6.85□□□□□ -1.31
C9orf3-205ENST00000427193 PIF1Q9H611 641 aa6.85□□□□□ -1.31
C9orf3-205ENST00000427193 SPTLC3Q9NUV7 552 aa6.85□□□□□ -1.31
C9orf3-205ENST00000427193 TMOD3Q9NYL9 352 aa6.85□□□□□ -1.31
C9orf3-205ENST00000427193 PRSS50Q9UI38 385 aa6.85□□□□□ -1.31
C9orf3-205ENST00000427193 PPP2R3BQ9Y5P8 575 aa6.85□□□□□ -1.31
C9orf3-205ENST00000427193 ITGB4P16144 1822 aa6.85□□□□□ -1.31
C9orf3-205ENST00000427193 TIAM2Q8IVF5 1701 aa6.84□□□□□ -1.31
C9orf3-205ENST00000427193 IBTKQ9P2D0 1353 aaPredicted RBP6.84□□□□□ -1.31
C9orf3-205ENST00000427193 CENPVL1A0A0U1RR11 272 aa6.84□□□□□ -1.31
C9orf3-205ENST00000427193 GAGE12BA1L429 117 aa6.84□□□□□ -1.31
C9orf3-205ENST00000427193 GAGE12HA6NDE8 117 aa6.84□□□□□ -1.31
C9orf3-205ENST00000427193 DIRC3C9JPN6 131 aa6.84□□□□□ -1.31
C9orf3-205ENST00000427193 RNASET2O00584 256 aaKnown RBP6.84□□□□□ -1.31
C9orf3-205ENST00000427193 CENPBP07199 599 aaPredicted RBP6.84□□□□□ -1.31
C9orf3-205ENST00000427193 SNRPA1P09661 255 aaKnown RBP6.84□□□□□ -1.31
C9orf3-205ENST00000427193 LTA4HP09960 611 aaKnown RBP6.84□□□□□ -1.31
C9orf3-205ENST00000427193 MANFP55145 182 aaKnown RBP6.84□□□□□ -1.31
C9orf3-205ENST00000427193 C11orf74Q86VG3 221 aa6.84□□□□□ -1.31
C9orf3-205ENST00000427193 LILRA3Q8N6C8 439 aaPredicted RBP6.84□□□□□ -1.31
C9orf3-205ENST00000427193 ARHGAP45Q92619 1136 aa6.84□□□□□ -1.31
C9orf3-205ENST00000427193 GCC1Q96CN9 775 aa6.84□□□□□ -1.31
C9orf3-205ENST00000427193 FANCLQ9NW38 375 aa6.84□□□□□ -1.31
C9orf3-205ENST00000427193 TRPM5Q9NZQ8 1165 aa6.84□□□□□ -1.31
C9orf3-205ENST00000427193 KCNG1Q9UIX4 513 aa6.84□□□□□ -1.31
C9orf3-205ENST00000427193 TMPRSS11EQ9UL52 423 aa6.84□□□□□ -1.31
C9orf3-205ENST00000427193 CCDC88AQ3V6T2 1871 aa6.83□□□□□ -1.32
C9orf3-205ENST00000427193 LCHNA4D1U4 455 aa6.83□□□□□ -1.32
C9orf3-205ENST00000427193 BCAR3O75815 825 aa6.83□□□□□ -1.32
C9orf3-205ENST00000427193 NUDT3O95989 172 aa6.83□□□□□ -1.32
C9orf3-205ENST00000427193 IL2P60568 153 aa6.83□□□□□ -1.32
C9orf3-205ENST00000427193 DDR1Q08345 913 aa6.83□□□□□ -1.32
C9orf3-205ENST00000427193 UBE3CQ15386 1083 aa6.83□□□□□ -1.32
C9orf3-205ENST00000427193 SEPT7Q16181 437 aaKnown RBP6.83□□□□□ -1.32
C9orf3-205ENST00000427193 HECTD2Q5U5R9 776 aa6.83□□□□□ -1.32
C9orf3-205ENST00000427193 DRICH1Q6PGQ1 229 aaPredicted RBP6.83□□□□□ -1.32
C9orf3-205ENST00000427193 OR14C36Q8NHC7 312 aa6.83□□□□□ -1.32
C9orf3-205ENST00000427193 TARS2Q9BW92 718 aaKnown RBP6.83□□□□□ -1.32
C9orf3-205ENST00000427193 CYP4F11Q9HBI6 524 aa6.83□□□□□ -1.32
C9orf3-205ENST00000427193 EVLQ9UI08 416 aaPredicted RBP6.83□□□□□ -1.32
C9orf3-205ENST00000427193 PLAAQ9Y263 795 aa6.83□□□□□ -1.32
C9orf3-205ENST00000427193 CHST2Q9Y4C5 530 aa6.83□□□□□ -1.32
C9orf3-205ENST00000427193 LAS1LQ9Y4W2 734 aaKnown RBP6.83□□□□□ -1.32
C9orf3-205ENST00000427193 USP16Q9Y5T5 823 aa6.83□□□□□ -1.32
C9orf3-205ENST00000427193 DICER1Q9UPY3 1922 aaKnown RBP6.83□□□□□ -1.32
C9orf3-205ENST00000427193 THSD7BQ9C0I4 1608 aa6.83□□□□□ -1.32
C9orf3-205ENST00000427193 TMEM200CA6NKL6 621 aa6.82□□□□□ -1.32
C9orf3-205ENST00000427193 B5MCH6 92 aa6.82□□□□□ -1.32
C9orf3-205ENST00000427193 CA12O43570 354 aa6.82□□□□□ -1.32
C9orf3-205ENST00000427193 RAB11FIP3O75154 756 aa6.82□□□□□ -1.32
C9orf3-205ENST00000427193 CYP19A1P11511 503 aaPredicted RBP6.82□□□□□ -1.32
C9orf3-205ENST00000427193 FBLP22087 321 aaKnown RBP6.82□□□□□ -1.32
C9orf3-205ENST00000427193 PTTG1IPP53801 180 aa6.82□□□□□ -1.32
C9orf3-205ENST00000427193 FAM189BP81408 668 aa6.82□□□□□ -1.32
C9orf3-205ENST00000427193 APBA1Q02410 837 aa6.82□□□□□ -1.32
C9orf3-205ENST00000427193 PROSER3Q2NL68 480 aa6.82□□□□□ -1.32
C9orf3-205ENST00000427193 C19orf54Q5BKX5 351 aa6.82□□□□□ -1.32
C9orf3-205ENST00000427193 XYLT1Q86Y38 959 aa6.82□□□□□ -1.32
C9orf3-205ENST00000427193 PLXDC1Q8IUK5 500 aa6.82□□□□□ -1.32
C9orf3-205ENST00000427193 LYSMD2Q8IV50 215 aa6.82□□□□□ -1.32
C9orf3-205ENST00000427193 SLC41A1Q8IVJ1 513 aa6.82□□□□□ -1.32
C9orf3-205ENST00000427193 CDC5LQ99459 802 aaKnown RBP6.82□□□□□ -1.32
C9orf3-205ENST00000427193 TEX13AQ9BXU3 409 aaPredicted RBP6.82□□□□□ -1.32
C9orf3-205ENST00000427193 MS4A5Q9H3V2 200 aa6.82□□□□□ -1.32
C9orf3-205ENST00000427193 AKIP1Q9NQ31 210 aa6.82□□□□□ -1.32
C9orf3-205ENST00000427193 DDX21Q9NR30 783 aaKnown RBP eCLIP6.82□□□□□ -1.32
C9orf3-205ENST00000427193 SCN4AP35499 1836 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 KDM1AO60341 852 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 DDNO94850 711 aaPredicted RBP6.81□□□□□ -1.32
C9orf3-205ENST00000427193 FKBP9O95302 570 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 MGAT1P26572 445 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 ADCYAP1R1P41586 468 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 RRP1P56182 461 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms