RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 TAF6P49848 677 aa16.14■□□□□ 0.17
GINS3-203ENST00000426538 SCNN1GP51170 649 aa16.14■□□□□ 0.17
GINS3-203ENST00000426538 NAP1L1P55209 391 aaKnown RBP16.14■□□□□ 0.17
GINS3-203ENST00000426538 CCL23P55773 120 aa16.14■□□□□ 0.17
GINS3-203ENST00000426538 FMO1Q01740 532 aa16.14■□□□□ 0.17
GINS3-203ENST00000426538 SOX4Q06945 474 aaPredicted RBP16.14■□□□□ 0.17
GINS3-203ENST00000426538 SV2CQ496J9 727 aa16.14■□□□□ 0.17
GINS3-203ENST00000426538 ZNF569Q5MCW4 686 aa16.14■□□□□ 0.17
GINS3-203ENST00000426538 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.14■□□□□ 0.17
GINS3-203ENST00000426538 NECAB2Q7Z6G3 386 aa16.14■□□□□ 0.17
GINS3-203ENST00000426538 DDX1Q92499 740 aaKnown RBP16.14■□□□□ 0.17
GINS3-203ENST00000426538 SECISBP2LQ93073 1101 aaKnown RBP16.14■□□□□ 0.17
GINS3-203ENST00000426538 IRX2Q9BZI1 471 aaPredicted RBP16.14■□□□□ 0.17
GINS3-203ENST00000426538 PPP1R12CQ9BZL4 782 aa16.14■□□□□ 0.17
GINS3-203ENST00000426538 SMYD3Q9H7B4 428 aa16.14■□□□□ 0.17
GINS3-203ENST00000426538 TMEM39AQ9NV64 488 aa16.14■□□□□ 0.17
GINS3-203ENST00000426538 MIOSQ9NXC5 875 aa16.14■□□□□ 0.17
GINS3-203ENST00000426538 INTUQ9ULD6 942 aa16.14■□□□□ 0.17
GINS3-203ENST00000426538 PDCD11Q14690 1871 aaKnown RBP16.13■□□□□ 0.17
GINS3-203ENST00000426538 MACROD2A1Z1Q3 448 aa16.13■□□□□ 0.17
GINS3-203ENST00000426538 KPNA7A9QM74 516 aa16.13■□□□□ 0.17
GINS3-203ENST00000426538 RTN2O75298 545 aa16.13■□□□□ 0.17
GINS3-203ENST00000426538 ZNF132P52740 706 aa16.13■□□□□ 0.17
GINS3-203ENST00000426538 FAM189BP81408 668 aa16.13■□□□□ 0.17
GINS3-203ENST00000426538 ZNF598Q86UK7 904 aaKnown RBP16.13■□□□□ 0.17
GINS3-203ENST00000426538 SCLYQ96I15 445 aa16.13■□□□□ 0.17
GINS3-203ENST00000426538 PACSIN1Q9BY11 444 aa16.13■□□□□ 0.17
GINS3-203ENST00000426538 POMCP01189 267 aa16.12■□□□□ 0.17
GINS3-203ENST00000426538 CALCAP01258 141 aa16.12■□□□□ 0.17
GINS3-203ENST00000426538 FTLP02792 175 aaPredicted RBP16.12■□□□□ 0.17
GINS3-203ENST00000426538 CASQ1P31415 396 aa16.12■□□□□ 0.17
GINS3-203ENST00000426538 AFF1P51825 1210 aaKnown RBP16.12■□□□□ 0.17
GINS3-203ENST00000426538 GALCP54803 685 aa16.12■□□□□ 0.17
GINS3-203ENST00000426538 GPNMBQ14956 572 aa16.12■□□□□ 0.17
GINS3-203ENST00000426538 GLB1LQ6UWU2 654 aa16.12■□□□□ 0.17
GINS3-203ENST00000426538 RNF10Q8N5U6 811 aaKnown RBP16.12■□□□□ 0.17
GINS3-203ENST00000426538 ZNF606Q8WXB4 792 aa16.12■□□□□ 0.17
GINS3-203ENST00000426538 CTNNBL1Q8WYA6 563 aaPredicted RBP16.12■□□□□ 0.17
GINS3-203ENST00000426538 PCDHB18PQ96TA0 734 aa16.12■□□□□ 0.17
GINS3-203ENST00000426538 SDCBP2Q9H190 292 aa16.12■□□□□ 0.17
GINS3-203ENST00000426538 BARX2Q9UMQ3 279 aaPredicted RBP16.12■□□□□ 0.17
GINS3-203ENST00000426538 NENFQ9UMX5 172 aa16.12■□□□□ 0.17
GINS3-203ENST00000426538 INPP5FQ9Y2H2 1132 aa16.12■□□□□ 0.17
GINS3-203ENST00000426538 PAXBP1Q9Y5B6 917 aa16.12■□□□□ 0.17
GINS3-203ENST00000426538 ATP8B3O60423 1300 aa16.12■□□□□ 0.17
GINS3-203ENST00000426538 ANKRD62A6NC57 917 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 ENPP3O14638 875 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 CILPO75339 1184 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 PAEPP09466 180 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 CLTBP09497 229 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 RPL9P32969 192 aaKnown RBP16.11■□□□□ 0.17
GINS3-203ENST00000426538 CYP2C18P33260 490 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 LILRA4P59901 499 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 GRIK3Q13003 919 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 TRIM72Q6ZMU5 477 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 PALB2Q86YC2 1186 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 OLIG1Q8TAK6 271 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 TMEM176AQ96HP8 235 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 ISCUQ9H1K1 167 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 GDAP2Q9NXN4 497 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 TAS2R14Q9NYV8 317 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 PCDHB7Q9Y5E2 793 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 MED7O43513 233 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 HUS1O60921 280 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 TACC1O75410 805 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 CD19P15391 556 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 ABCB4P21439 1286 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 INCA1Q0VD86 236 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 DNAAF5Q86Y56 855 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 APPL2Q8NEU8 664 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 TRIM58Q8NG06 486 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 URGCPQ8TCY9 931 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 LINC01599Q8WXQ3 324 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 NOX5Q96PH1 765 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 NT5C1AQ9BXI3 368 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 DNAI2Q9GZS0 605 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 WNT8AQ9H1J5 351 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 ELAC1Q9H777 363 aaKnown RBP16.11■□□□□ 0.17
GINS3-203ENST00000426538 RNF216Q9NWF9 866 aaPredicted RBP16.11■□□□□ 0.17
GINS3-203ENST00000426538 TMEM161AQ9NX61 479 aa16.11■□□□□ 0.17
GINS3-203ENST00000426538 SCN1AP35498 2009 aa16.1■□□□□ 0.17
GINS3-203ENST00000426538 BTNL10A8MVZ5 291 aa16.1■□□□□ 0.17
GINS3-203ENST00000426538 CXCL10P02778 98 aa16.1■□□□□ 0.17
GINS3-203ENST00000426538 TMEM253P0C7T8 217 aa16.1■□□□□ 0.17
GINS3-203ENST00000426538 NOP2P46087 812 aaKnown RBP16.1■□□□□ 0.17
GINS3-203ENST00000426538 CLCNKBP51801 687 aa16.1■□□□□ 0.17
GINS3-203ENST00000426538 RAD23BP54727 409 aa16.1■□□□□ 0.17
GINS3-203ENST00000426538 IFI16Q16666 785 aaKnown RBP16.1■□□□□ 0.17
GINS3-203ENST00000426538 LRRC26Q2I0M4 334 aa16.1■□□□□ 0.17
GINS3-203ENST00000426538 CLEC16AQ2KHT3 1053 aa16.1■□□□□ 0.17
GINS3-203ENST00000426538 ACAD10Q6JQN1 1059 aa16.1■□□□□ 0.17
GINS3-203ENST00000426538 PPP1R2P3Q6NXS1 205 aa16.1■□□□□ 0.17
GINS3-203ENST00000426538 DPH6Q7L8W6 267 aa16.1■□□□□ 0.17
GINS3-203ENST00000426538 DEFB128Q7Z7B8 93 aa16.1■□□□□ 0.17
GINS3-203ENST00000426538 SLC35F6Q8N357 371 aa16.1■□□□□ 0.17
GINS3-203ENST00000426538 DDX27Q96GQ7 796 aaKnown RBP16.1■□□□□ 0.17
GINS3-203ENST00000426538 HEXIM2Q96MH2 286 aaKnown RBP16.1■□□□□ 0.17
GINS3-203ENST00000426538 ALS2CR12Q96Q35 445 aa16.1■□□□□ 0.17
GINS3-203ENST00000426538 WDR24Q96S15 920 aa16.1■□□□□ 0.17
GINS3-203ENST00000426538 KANSL3Q9P2N6 904 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms