RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 GPR17Q13304 367 aa15.97■□□□□ 0.15
PDAP1-202ENST00000426447 CCINQ13939 588 aa15.97■□□□□ 0.15
PDAP1-202ENST00000426447 SLC10A6Q3KNW5 377 aa15.97■□□□□ 0.15
PDAP1-202ENST00000426447 ARMCX5Q6P1M9 558 aa15.97■□□□□ 0.15
PDAP1-202ENST00000426447 DNAJB7Q7Z6W7 309 aaPredicted RBP15.97■□□□□ 0.15
PDAP1-202ENST00000426447 KBTBD6Q86V97 674 aa15.97■□□□□ 0.15
PDAP1-202ENST00000426447 BPIFB1Q8TDL5 484 aa15.97■□□□□ 0.15
PDAP1-202ENST00000426447 GTF3C6Q969F1 213 aa15.97■□□□□ 0.15
PDAP1-202ENST00000426447 DRC1Q96MC2 740 aa15.97■□□□□ 0.15
PDAP1-202ENST00000426447 LRRC3BQ96PB8 259 aa15.97■□□□□ 0.15
PDAP1-202ENST00000426447 DNAJC25Q9H1X3 360 aa15.97■□□□□ 0.15
PDAP1-202ENST00000426447 TUBGCP4Q9UGJ1 667 aa15.97■□□□□ 0.15
PDAP1-202ENST00000426447 DNM3Q9UQ16 869 aa15.97■□□□□ 0.15
PDAP1-202ENST00000426447 ASB3Q9Y575 518 aa15.97■□□□□ 0.15
PDAP1-202ENST00000426447 OR6C75A6NL08 312 aa15.96■□□□□ 0.15
PDAP1-202ENST00000426447 M0QZQ0 153 aa15.96■□□□□ 0.15
PDAP1-202ENST00000426447 SLC16A4O15374 487 aa15.96■□□□□ 0.15
PDAP1-202ENST00000426447 EPN2O95208 641 aa15.96■□□□□ 0.15
PDAP1-202ENST00000426447 KCNK5O95279 499 aa15.96■□□□□ 0.15
PDAP1-202ENST00000426447 PROZP22891 400 aa15.96■□□□□ 0.15
PDAP1-202ENST00000426447 SPAG1Q07617 926 aa15.96■□□□□ 0.15
PDAP1-202ENST00000426447 ORC2Q13416 577 aaPredicted RBP15.96■□□□□ 0.15
PDAP1-202ENST00000426447 ITPRIPL2Q3MIP1 535 aa15.96■□□□□ 0.15
PDAP1-202ENST00000426447 CENPPQ6IPU0 288 aa15.96■□□□□ 0.15
PDAP1-202ENST00000426447 TAS1R3Q7RTX0 852 aa15.96■□□□□ 0.15
PDAP1-202ENST00000426447 ITIH5Q86UX2 942 aa15.96■□□□□ 0.15
PDAP1-202ENST00000426447 TMEM209Q96SK2 561 aa15.96■□□□□ 0.15
PDAP1-202ENST00000426447 CRISPLD1Q9H336 500 aa15.96■□□□□ 0.15
PDAP1-202ENST00000426447 OBP2AQ9NY56 170 aa15.96■□□□□ 0.15
PDAP1-202ENST00000426447 ARHGAP28Q9P2N2 729 aa15.96■□□□□ 0.15
PDAP1-202ENST00000426447 STK24Q9Y6E0 443 aa15.96■□□□□ 0.15
PDAP1-202ENST00000426447 COL4A2P08572 1712 aa15.96■□□□□ 0.15
PDAP1-202ENST00000426447 MAP1BP46821 2468 aaKnown RBP15.95■□□□□ 0.14
PDAP1-202ENST00000426447 CCDC163A0A0D9SF12 145 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 SFI1A8K8P3 1242 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 E9PMD0 336 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 CLDN3O15551 220 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 MEFVO15553 781 aaPredicted RBP15.95■□□□□ 0.14
PDAP1-202ENST00000426447 TOM1L1O75674 476 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 LARGE1O95461 756 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 VNN2O95498 520 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 RAP1GAPP47736 663 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 GRSF1Q12849 480 aaKnown RBP eCLIP15.95■□□□□ 0.14
PDAP1-202ENST00000426447 GNL2Q13823 731 aaKnown RBP15.95■□□□□ 0.14
PDAP1-202ENST00000426447 NOLC1Q14978 699 aaKnown RBP eCLIP15.95■□□□□ 0.14
PDAP1-202ENST00000426447 TAF12Q16514 161 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 TTC38Q5R3I4 469 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 RNF43Q68DV7 783 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 OVOS1Q6IE37 1185 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 GAREM2Q75VX8 874 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 ATAD1Q8NBU5 361 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 SNX29Q8TEQ0 813 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 PSMG2Q969U7 264 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 KIF12Q96FN5 646 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 GCNAQ96QF7 691 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 LSM14BQ9BX40 385 aaKnown RBP15.95■□□□□ 0.14
PDAP1-202ENST00000426447 RAB34Q9BZG1 259 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 SMOC1Q9H4F8 434 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 TASP1Q9H6P5 420 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 C17orf75Q9HAS0 396 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 PLEKHA5Q9HAU0 1116 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 SH2B1Q9NRF2 756 aaPredicted RBP15.95■□□□□ 0.14
PDAP1-202ENST00000426447 KCNG1Q9UIX4 513 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 PCDHGA5Q9Y5G8 931 aa15.95■□□□□ 0.14
PDAP1-202ENST00000426447 ABLIM1O14639 778 aa15.94■□□□□ 0.14
PDAP1-202ENST00000426447 SOAT2O75908 522 aa15.94■□□□□ 0.14
PDAP1-202ENST00000426447 PROS1P07225 676 aa15.94■□□□□ 0.14
PDAP1-202ENST00000426447 MPLP40238 635 aa15.94■□□□□ 0.14
PDAP1-202ENST00000426447 FXR2P51116 673 aaKnown RBP eCLIP15.94■□□□□ 0.142e-7■□□□□ 10.6
PDAP1-202ENST00000426447 SMTNP53814 917 aa15.94■□□□□ 0.14
PDAP1-202ENST00000426447 PDIA5Q14554 519 aa15.94■□□□□ 0.14
PDAP1-202ENST00000426447 VEPH1Q14D04 833 aa15.94■□□□□ 0.14
PDAP1-202ENST00000426447 DAW1Q8N136 415 aa15.94■□□□□ 0.14
PDAP1-202ENST00000426447 MKNK1Q9BUB5 465 aa15.94■□□□□ 0.14
PDAP1-202ENST00000426447 VPS45Q9NRW7 570 aa15.94■□□□□ 0.14
PDAP1-202ENST00000426447 GKN1Q9NS71 199 aa15.94■□□□□ 0.14
PDAP1-202ENST00000426447 UBQLN1Q9UMX0 589 aaKnown RBP15.94■□□□□ 0.14
PDAP1-202ENST00000426447 MTMR11A4FU01 709 aa15.93■□□□□ 0.14
PDAP1-202ENST00000426447 XPOTO43592 962 aaKnown RBP15.93■□□□□ 0.14
PDAP1-202ENST00000426447 PRAMEF12O95522 483 aa15.93■□□□□ 0.14
PDAP1-202ENST00000426447 CLTAP09496 248 aa15.93■□□□□ 0.14
PDAP1-202ENST00000426447 CXCL8P10145 99 aa15.93■□□□□ 0.14
PDAP1-202ENST00000426447 LRPAP1P30533 357 aa15.93■□□□□ 0.14
PDAP1-202ENST00000426447 TUFMP49411 452 aaKnown RBP15.93■□□□□ 0.14
PDAP1-202ENST00000426447 MCM2P49736 904 aa15.93■□□□□ 0.14
PDAP1-202ENST00000426447 CYP4F8P98187 520 aa15.93■□□□□ 0.14
PDAP1-202ENST00000426447 AMPD2Q01433 879 aa15.93■□□□□ 0.14
PDAP1-202ENST00000426447 CACNB1Q02641 598 aaPredicted RBP15.93■□□□□ 0.14
PDAP1-202ENST00000426447 MYBPC2Q14324 1141 aa15.93■□□□□ 0.14
PDAP1-202ENST00000426447 PLA2G2CQ5R387 149 aa15.93■□□□□ 0.14
PDAP1-202ENST00000426447 KRT79Q5XKE5 535 aa15.93■□□□□ 0.14
PDAP1-202ENST00000426447 PSAPL1Q6NUJ1 521 aa15.93■□□□□ 0.14
PDAP1-202ENST00000426447 RINT1Q6NUQ1 792 aa15.93■□□□□ 0.14
PDAP1-202ENST00000426447 PKN3Q6P5Z2 889 aa15.93■□□□□ 0.14
PDAP1-202ENST00000426447 TMEM130Q8N3G9 435 aa15.93■□□□□ 0.14
PDAP1-202ENST00000426447 CAMKK1Q8N5S9 505 aa15.93■□□□□ 0.14
PDAP1-202ENST00000426447 C8orf76Q96K31 380 aa15.93■□□□□ 0.14
PDAP1-202ENST00000426447 SEPT5Q99719 369 aaPredicted RBP15.93■□□□□ 0.14
PDAP1-202ENST00000426447 NTPCRQ9BSD7 190 aaKnown RBP15.93■□□□□ 0.14
PDAP1-202ENST00000426447 SMG9Q9H0W8 520 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms